EY703478

Overview
NameEY703478
Unique NameEY703478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703478 vs. ExPASy Swiss-Prot
Match: SUT41_ARATH (Sulfate transporter 4.1, chloroplastic OS=Arabidopsis thaliana GN=SULTR4;1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.172e-26
Identity = 68/184 (36.96%), Postives = 107/184 (58.15%), Query Frame = 1
Query:  160 YPSTRPYTMTVVDHINASNSGLCGGRTHIIPACALIWMTRQLEHIPHPALAAITYSTVTGLVDYHEAFNMRLGNKPAMIPSTITILSTKLLGIDTVLPMSANAILAHHIR*LSNPYYAIKRQLPCTTEHIIT**YL*SCSHHSNLIKRLVAPILCADITHLKDMLQEYEVDVDRSTRRGPEVAR 711
            YP+T  ++ + V++ + + +GL G  T II  C+L+++T   ++IP  ALAAI  S V+GLVDY EA  +   +K      TIT   T   GI+  + +     LA  I   +NP+ A+  +LP TT +     Y  + +++  +I R+ +PI  A+I+++KD L+EYEV VD+ T RG EV R
Sbjct:  385 YPATGSFSRSAVNNESEAKTGLSGLITGIIIGCSLLFLTPMFKYIPQCALAAIVISAVSGLVDYDEAIFLWRVDKRDFSLWTITSTITLFFGIEIGVLVGVGFSLAFVIHESANPHIAVLGRLPGTTVYRNIKQYPEAYTYNGIVIVRIDSPIYFANISYIKDRLREYEVAVDKYTNRGLEVDR 568          

HSP 2 Score: 36.5798 bits (83), Expect = 1.172e-26
Identity = 21/47 (44.68%), Postives = 29/47 (61.70%), Query Frame = 3
Query:    6 ISTALLITGATIWASDGGPESLNAENGYD*DSNREESGL*CSKLLGS 146
            + T+ LITG  I  S G  ++L A+N Y+ DSN E  GL  + +LGS
Sbjct:  334 LPTSALITGVAILESVGIAKALAAKNRYELDSNSELFGLGVANILGS 380          
BLAST of EY703478 vs. ExPASy Swiss-Prot
Match: SUT42_ARATH (Probable sulfate transporter 4.2 OS=Arabidopsis thaliana GN=SULTR4;2 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.416e-26
Identity = 65/184 (35.33%), Postives = 106/184 (57.61%), Query Frame = 1
Query:  160 YPSTRPYTMTVVDHINASNSGLCGGRTHIIPACALIWMTRQLEHIPHPALAAITYSTVTGLVDYHEAFNMRLGNKPAMIPSTITILSTKLLGIDTVLPMSANAILAHHIR*LSNPYYAIKRQLPCTTEHIIT**YL*SCSHHSNLIKRLVAPILCADITHLKDMLQEYEVDVDRSTRRGPEVAR 711
            YP+T  ++ + V+  + + +GL G  T II  C+L+++T   + IP  ALAAI  S V+GLVDY  A  +   +K      TIT  +T   GI+  + +     LA  I   +NP+ A+  +LP TT +     Y  + +++  +I R+ API  A+I+++KD L+EYEV +D+ T +GP++ R
Sbjct:  372 YPTTGSFSRSAVNSESEAKTGLSGLVTGIIIGCSLLFLTPMFKFIPQCALAAIVISAVSGLVDYEGAIFLWRVDKRDFTLWTITSTTTLFFGIEIGVLIGVGFSLAFVIHESANPHIAVLGRLPGTTVYRNMKQYPEAYTYNGIVIVRIDAPIYFANISYIKDRLREYEVAIDKHTSKGPDMER 555          

HSP 2 Score: 35.039 bits (79), Expect = 7.416e-26
Identity = 20/47 (42.55%), Postives = 28/47 (59.57%), Query Frame = 3
Query:    6 ISTALLITGATIWASDGGPESLNAENGYD*DSNREESGL*CSKLLGS 146
            + T+ LITG  I  S G  ++L A+N Y+ DSN E  GL  + + GS
Sbjct:  321 LPTSALITGVAILESVGIAKALAAKNRYELDSNSELFGLGVANIFGS 367          
The following BLAST results are available for this feature:
BLAST of EY703478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SUT41_ARATH1.172e-2636.96Sulfate transporter 4.1, chloroplastic OS=Arabidop... [more]
SUT42_ARATH7.416e-2635.33Probable sulfate transporter 4.2 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-020-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703478 ID=EY703478; Name=EY703478; organism=Citrus sinensis; type=EST; length=821bp
CTTATATTTCTACTGCACTACTAATTACGGGCGCCACTATCTGGGCTTCT
GATGGGGGACCCGAATCATTGAATGCTGAGAACGGTTATGACTAGGATTC
TAATCGAGAAGAGAGCGGTCTTTGATGTTCCAAGCTTCTGGGTTCAAACA
TGTGTCAAATATCCATCGACAAGGCCCTACACAATGACTGTAGTTGATCA
TATAAATGCATCTAACTCCGGCTTATGCGGGGGTAGAACACACATTATAC
CGGCCTGTGCACTGATATGGATGACCCGACAGTTAGAACACATACCACAT
CCTGCCTTGGCTGCAATAACCTATTCTACTGTCACGGGACTGGTGGATTA
TCATGAGGCCTTCAACATGAGGCTGGGAAATAAACCTGCTATGATCCCTT
CAACCATTACTATACTTTCTACTAAATTACTAGGTATTGACACTGTCCTC
CCTATGAGTGCAAATGCAATACTGGCTCACCATATCCGATAATTATCTAA
TCCCTATTATGCAATAAAGAGACAACTTCCCTGCACTACTGAGCACATCA
TCACTTAATAATACCTATAATCGTGTTCTCACCACAGCAATCTTATAAAG
CGTCTAGTTGCACCTATCCTCTGTGCTGATATAACTCACCTCAAAGACAT
GCTACAGGAATATGAAGTTGATGTTGATAGATCTACAAGGCGTGGACCGG
AAGTCGCAAGATTTACTACGTGATCTAGAGATGCACCTGGTCCCTATTCC
AATCTAGTGCTAGCCAGGCCTCGAAGACTTGTTCAACAATCAAATCAAGG
GCCATGAGATGCCATTTCCAA
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