EY703476

Overview
NameEY703476
Unique NameEY703476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703476 vs. ExPASy Swiss-Prot
Match: DIM_PEA (Cell elongation protein diminuto OS=Pisum sativum GN=DIM PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.133e-93
Identity = 170/235 (72.34%), Postives = 196/235 (83.40%), Query Frame = 1
Query:   37 PKKEKGIVDFLVQFRWILVVYVVLPISVTIYFLIYLGDVKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMTNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTDGGLINGYGIEGSAHIYGLLSDTGGAYEIVLAHGQAVIATDDNEYKDLFYAIH*LKGHLGFLSRLKSSLYPLRIH-EADLKPVVG 738
            PK++K  VD+ V+FRWILV++VVLPIS T+YFL YLGDV+S+ KS+K RQKEHDENV+KVV RLK+RNPSKDGLVCTARKPW+AVGM NVDYKRARHFEVDLS FRNILDIDK+RMIA+VEPLVNMGQI+R T PMNL+LAVVAELDDLT GGLINGYGIEGS+H YGL SDT  A+EI+LA G  V AT DNEY DLFYAI   +G LG L   +  L P++ + +   KPVVG
Sbjct:   10 PKRKKIWVDYFVKFRWILVIFVVLPISFTLYFLTYLGDVRSEWKSFKTRQKEHDENVQKVVNRLKKRNPSKDGLVCTARKPWVAVGMRNVDYKRARHFEVDLSPFRNILDIDKERMIARVEPLVNMGQITRVTVPMNLALAVVAELDDLTVGGLINGYGIEGSSHKYGLFSDTVVAFEIILADGSLVKATKDNEYSDLFYAIPWSQGTLGLLVAAEVKLIPIKEYMKLTYKPVVG 244          

HSP 2 Score: 30.0314 bits (66), Expect = 1.133e-93
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 2
Query:   11 MSDLAAPLRPKRKKELW 61
            MSDL APLRPKRKK +W
Sbjct:    1 MSDLEAPLRPKRKK-IW 16          
BLAST of EY703476 vs. ExPASy Swiss-Prot
Match: DIM_ARATH (Cell elongation protein DIMINUTO OS=Arabidopsis thaliana GN=DIM PE=1 SV=2)

HSP 1 Score: 321.242 bits (822), Expect = 5.079e-87
Identity = 159/212 (75.00%), Postives = 183/212 (86.32%), Query Frame = 1
Query:   37 PKKEKGIVDFLVQFRWILVVYVVLPISVTIYFLIYLGDVKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMTNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTDGGLINGYGIEGSAHIYGLLSDTGGAYEIVLAHGQAVIATDDNEYKDLFYAIH*LKGHLGFL 672
            PK++K  VD+ V+FRWI+V+++VLP S T YFLIYLGD+ S+ KS++KRQKEHDENVKKV+KRLK R+ SKDGLVCTARKPWIAVGM NVDYKRARHFEVDL  FRNIL+I+K++M A+VEPLVNMGQISRAT PMNLSLAVVAELDDLT GGLINGYGIEGS+HIYGL +DT  AYEIVLA G+ V AT DNEY DL+YAI   +G LG L
Sbjct:   11 PKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQKEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILEINKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFADTVEAYEIVLAGGELVRATRDNEYSDLYYAIPWSQGTLGLL 222          
BLAST of EY703476 vs. ExPASy Swiss-Prot
Match: DHC24_MACFA (24-dehydrocholesterol reductase OS=Macaca fascicularis GN=DHCR24 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.030e-27
Identity = 81/234 (34.62%), Postives = 126/234 (53.85%), Query Frame = 1
Query:   49 KGIVDFLVQFRWILVVYVVLPISVTIYFLIYLGD-VKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMTNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTDGGLINGYGIEGSAHIYGLLSDTGGAYEIVLAHGQAVIATDDNEYKDLFYAIH*LKGHLGFLSRLKSSLYPLRIH-EADLKPVVGIQ 744
            KG+   L+  RW+ V   +LP+S+      Y+   V   + S  +  ++   +++K V+  KE+       +CT R  W+ V +    YK+  H  + ++   +IL++D  + I +VEPLV MGQ++     +  +L V+ ELDDLT GGLI G GIE S+H YGL      AYE+VLA G  V  T  +E  DLFYA+    G LGFL   +  + P + + +   +PV G++
Sbjct:   21 KGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVRDIQKQVREWKEQGSKT--FMCTGRPGWLTVSLRVGKYKKT-HKNIMINLM-DILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELVLADGSFVRCT-PSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKLRFEPVQGLE 249          
BLAST of EY703476 vs. ExPASy Swiss-Prot
Match: DHC24_RAT (24-dehydrocholesterol reductase OS=Rattus norvegicus GN=Dhcr24 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.651e-27
Identity = 80/234 (34.19%), Postives = 128/234 (54.70%), Query Frame = 1
Query:   49 KGIVDFLVQFRWILVVYVVLPISVTIYFLIYLGD-VKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMTNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTDGGLINGYGIEGSAHIYGLLSDTGGAYEIVLAHGQAVIATDDNEYKDLFYAIH*LKGHLGFLSRLKSSLYPLRIH-EADLKPVVGIQ 744
            KG+   L+  RW+ V   +LP+S+      Y+   V   + S  +  ++  ++++K V+  KE+       +CT R  W+ V +    YK+  H  + ++   +IL++D  + I +VEPLV+MGQ++     +  +L V+ ELDDLT GGLI G GIE S+H YGL      AYE++LA G  V  T  +E  DLFYA+    G LGFL   +  + P + + +   +PV G++
Sbjct:   21 KGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVQDIQKQVREWKEQGSKT--FMCTGRPGWLTVSLRVGKYKKT-HKNIMINLM-DILEVDTKKQIVRVEPLVSMGQVTALLNSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELILADGSFVRCT-PSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKLRFEPVRGLE 249          
BLAST of EY703476 vs. ExPASy Swiss-Prot
Match: DHC24_HUMAN (24-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR24 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.651e-27
Identity = 81/234 (34.62%), Postives = 126/234 (53.85%), Query Frame = 1
Query:   49 KGIVDFLVQFRWILVVYVVLPISVTIYFLIYLGD-VKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMTNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTDGGLINGYGIEGSAHIYGLLSDTGGAYEIVLAHGQAVIATDDNEYKDLFYAIH*LKGHLGFLSRLKSSLYPLRIH-EADLKPVVGIQ 744
            KG+   L+  RW+ V   +LP+S+      Y+   V   + S  +  ++   +++K V+  KE+       +CT R  W+ V +    YK+  H  + ++   +IL++D  + I +VEPLV MGQ++     +  +L V+ ELDDLT GGLI G GIE S+H YGL      AYE+VLA G  V  T  +E  DLFYA+    G LGFL   +  + P + + +   +PV G++
Sbjct:   21 KGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVRDIQKQVREWKEQGSKT--FMCTGRPGWLTVSLRVGKYKKT-HKNIMINLM-DILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELVLADGSFVRCT-PSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKLRFEPVRGLE 249          
BLAST of EY703476 vs. ExPASy Swiss-Prot
Match: DHC24_MOUSE (24-dehydrocholesterol reductase OS=Mus musculus GN=Dhcr24 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.522e-27
Identity = 80/234 (34.19%), Postives = 127/234 (54.27%), Query Frame = 1
Query:   49 KGIVDFLVQFRWILVVYVVLPISVTIYFLIYLGD-VKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMTNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTDGGLINGYGIEGSAHIYGLLSDTGGAYEIVLAHGQAVIATDDNEYKDLFYAIH*LKGHLGFLSRLKSSLYPLRIH-EADLKPVVGIQ 744
            KG+   L+  RW+ V   +LP+S+      Y+   V   + S  +  ++   +++K V+  KE+       +CT R  W+ V +    YK+  H  + ++   +IL++D  + I +VEPLV+MGQ++     +  +L V+ ELDDLT GGLI G GIE S+H YGL      AYE++LA G  V  T  +E  DLFYA+    G LGFL   +  + P + + +   +PV G++
Sbjct:   21 KGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVRDIQKQVREWKEQGSKT--FMCTGRPGWLTVSLRVGKYKKT-HKNIMINLM-DILEVDTKKQIVRVEPLVSMGQVTALLNSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELILADGSFVRCT-PSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKLRFEPVRGLE 249          
BLAST of EY703476 vs. ExPASy Swiss-Prot
Match: DIML_CAEEL (Diminuto-like protein OS=Caenorhabditis elegans GN=F52H2.6 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.732e-19
Identity = 68/230 (29.57%), Postives = 110/230 (47.83%), Query Frame = 1
Query:   46 EKGIVDFLVQFRWILVVYVVLPISVTIYFLIYLGDVKSDM-KSYKKRQKEHDENVKKVVKRLKERNPS-KDGLVCTARKPWIAVGMTNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTDGGLINGYGIEGSAHIYGLLSDTGGAYEIVLAHGQAVIATDDNEYK--------DLFYAIH*LKGHLGFLSRLKSSLYPLR 705
            EK +   +  FRW+ VV  +LP+S   +    + D ++ +  +       H   VK + ++LKE N + +   +  AR  W+ +      YK     ++      +ILD+D ++M  K EP V MGQ+S+       +L V+ ELDDLT GGLING G+E  +  YG+       YE+V++ G+      D+  K         LF+AI   +G + FL      + P +
Sbjct:   15 EKCVEFIMFHFRWVFVVPFLLPLS---FLFNTVFDFRNRIVHAVNSAPNAHVRKVKHIQEQLKEWNDNGRKSKLVNARPGWLTMSFRFPLYKE-NATKIATDKLFDILDLDVEKMTVKAEPGVTMGQLSQYLISRGYTLPVLPELDDLTVGGLINGCGVESGSFKYGMFQHICTGYEVVMSDGELKNVYPDSAAKTEQAKQDNSLFFAIPWSQGTICFLVAATIKIIPCK 240          
The following BLAST results are available for this feature:
BLAST of EY703476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DIM_PEA1.133e-9372.34Cell elongation protein diminuto OS=Pisum sativum ... [more]
DIM_ARATH5.079e-8775.00Cell elongation protein DIMINUTO OS=Arabidopsis th... [more]
DHC24_MACFA2.030e-2734.6224-dehydrocholesterol reductase OS=Macaca fascicul... [more]
DHC24_RAT2.651e-2734.1924-dehydrocholesterol reductase OS=Rattus norvegic... [more]
DHC24_HUMAN2.651e-2734.6224-dehydrocholesterol reductase OS=Homo sapiens GN... [more]
DHC24_MOUSE4.522e-2734.1924-dehydrocholesterol reductase OS=Mus musculus GN... [more]
DIML_CAEEL7.732e-1929.57Diminuto-like protein OS=Caenorhabditis elegans GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-020-B02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703476 ID=EY703476; Name=EY703476; organism=Citrus sinensis; type=EST; length=925bp
ACTTCCTACCATGTCTGATCTTGCAGCACCGCTGCGCCCAAAAAGGAAAA
AGGAATTGTGGACTTTCTTGTCCAGTTCCGATGGATCCTCGTTGTTTATG
TTGTCCTCCCCATCTCTGTCACCATTTACTTCCTCATATATCTTGGAGAT
GTCAAATCTGATATGAAGTCCTACAAGAAGCGTCAAAAGGAGCATGATGA
AAATGTCAAGAAAGTTGTTAAACGGCTGAAAGAGAGGAATCCATCAAAGG
ATGGTCTTGTCTGCACAGCTCGTAAACCCTGGATCGCAGTTGGAATGACG
AATGTGGACTACAAGCGAGCGCGGCATTTTGAAGTTGACTTATCAGCTTT
TCGTAACATCCTTGACATTGACAAAGATAGAATGATTGCAAAAGTTGAGC
CTCTTGTCAACATGGGGCAAATCAGCAGAGCTACATGCCCAATGAACCTT
TCCCTTGCAGTGGTTGCAGAGCTTGATGATCTTACTGATGGTGGCCTTAT
CAATGGCTATGGAATTGAAGGAAGTGCTCACATCTATGGCCTATTATCTG
ATACTGGTGGTGCATATGAGATTGTTCTGGCACATGGCCAAGCTGTCATA
GCCACCGATGACAATGAGTATAAAGATCTTTTCTATGCAATCCACTGACT
TAAGGGACACTTAGGCTTCTTGTCTCGGCTGAAATCAAGCTTATACCCAT
TAAGGATACATGAAGCTGACTTAAAACCTGTNGTGGGTATCCAAGAGAGA
TTGCCAGGGCTTTGCAGACTCTCTTGCTCCAGAAATGGGATTCTGACAAT
TCAGCTTGGGTCCGAACTTCCTGGAGGCATGATTACACTTCACAGAGCCT
GATTTATACCAGGAGTTTGCCTTCAAGAAAAGGCCGGAAAAGGGAATGCA
TTACCACGTGGGTTGGGGGTTAAAC
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