EY703468

Overview
NameEY703468
Unique NameEY703468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.475e-29
Identity = 71/134 (52.99%), Postives = 85/134 (63.43%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNI 549
            CVAI+DP +GV VN K CKDP  A+A  +F S L + G T N +  + T  NV+QIPGLNTLGIS   IDYAPYGQ PPH HPRAT I   +EGT+YV  V S+Q NN   +KV       VF    + +Q NI
Sbjct:   31 CVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNI 164
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.475e-29
Identity = 71/134 (52.99%), Postives = 85/134 (63.43%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNI 549
            CVAI+DP +GV VN K CKDP  A+A  +F S L + G T N +  + T  NV+QIPGLNTLGIS   IDYAPYGQ PPH HPRAT I   +EGT+YV  V S+Q NN   +KV       VF    + +Q NI
Sbjct:   31 CVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNI 164
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.475e-29
Identity = 71/134 (52.99%), Postives = 85/134 (63.43%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNI 549
            CVAI+DP +GV VN K CKDP  A+A  +F S L + G T N +  + T  NV+QIPGLNTLGIS   IDYAPYGQ PPH HPRAT I   +EGT+YV  V S+Q NN   +KV       VF    + +Q NI
Sbjct:   31 CVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNI 164
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.197e-28
Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNI 549
            CVAI D  +GV VN K CKDP  A+A  +F S L + G T N +  + T  NV+QIPGLNTLGIS   IDYAPYGQ PPH HPRAT I   +EGT+YV  V S+Q NN   +KV       VF    + +Q NI
Sbjct:   32 CVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNI 165
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.197e-28
Identity = 69/134 (51.49%), Postives = 85/134 (63.43%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNI 549
            CVAI+D  +GV VN K CKDP  A+A  +F S L + G+T N +  + T  NV+QIPGLNT+GIS   IDYAPYGQ PPH HPRAT I   +EGT+YV  V S+Q NN   +KV       VF    + +Q NI
Sbjct:   32 CVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNI 165
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 5.131e-26
Identity = 66/134 (49.25%), Postives = 82/134 (61.19%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNI 549
            CVAI+D   GV VN + CKDP    A  +F S L  PGNT N +G + T  NV+QIPGLNT+GIS   IDYAP+GQ PPH HPR + I   +EGT+YV  V S+Q NN   +KV       VF    + +Q N+
Sbjct:   32 CVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNV 164
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.131e-26
Identity = 67/134 (50.00%), Postives = 82/134 (61.19%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNI 549
            CVAI+D   GV VN + CKDP    A  +F S L  PGNT N +G + T  NV+QIPGLNT+GIS   IDYAP+GQ PPH HPR + I   +EGT+YV  V S+Q NN   +KV       VF    + +Q NI
Sbjct:   32 CVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNI 164
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.701e-26
Identity = 66/134 (49.25%), Postives = 82/134 (61.19%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNI 549
            CVAI+D   GV VN + CKDP    A  +F S L  PGNT N +G + T  NV+QIPGLNT+GIS   IDYAP+GQ PPH HPR + I   +EGT+YV  V S+Q NN   +KV       VF    + +Q N+
Sbjct:   32 CVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNV 164
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.143e-25
Identity = 62/134 (46.27%), Postives = 79/134 (58.96%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNI 549
            CV +N P DGV VN K CKDP +  A  +F S L +PGNT N +G + T  NV  + GLNTLGIS   IDYAP GQ PPH HPRAT I    +GT+ V  + S+Q  N   +K   +    VF +  + +Q N+
Sbjct:   34 CVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNL 167
[Close]
BLAST of EY703468 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.409e-25
Identity = 66/138 (47.83%), Postives = 83/138 (60.14%), Query Frame = 1 
Query:  148 CVAINDPNDGVLVNAKKCKDPNLARALYYFLSWLCKPGNTTNLLGVDETYPNVEQIPGLNTLGISTYSIDYAPYGQRPPHIHPRATLIFSTLEGTIYVRCVKSDQLNNNSCSKV*KMEMSLVFHKD*LTYQSNIKNKN 561
            CVA++D + GV VN K CKDP   +A  +F S L   GNT N +G + T  NV++IPGLNTLG+S   ID+AP GQ PPH HPRAT I   +EGT+ V  V S+Q NN   SKV       VF    + +Q N+   N
Sbjct:   34 CVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTN 170
The following BLAST results are available for this feature:
BLAST of EY703468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
GL119_ARATH6.475e-2952.99Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL117_ARATH6.475e-2952.99Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH6.475e-2952.99Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL114_ARATH4.197e-2852.24Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL113_ARATH4.197e-2851.49Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL118_ARATH5.131e-2649.25Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL116_ARATH5.131e-2650.00Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL120_ARATH6.701e-2649.25Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL18_ARATH1.143e-2546.27Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
GL17_ARATH7.409e-2547.83Germin-like protein subfamily 1 member 7 OS=Arabid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-020-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703468 ID=EY703468; Name=EY703468; organism=Citrus sinensis; type=EST; length=939bp
TTCTGGTAACGCCTGCCGTACTTTGTCCGGNATTTCCAGAATCGACCCAC
GCGTCCGGGTAATATAATACTGTATAGTCTTGCCCTATAAAAACTCTGGC
TTCTTCTTTGGCCTATGCCACTGACCCTGGCCATCTTCAACAAGTCATGT
GTAGCCATCAATGACCCCAATGATGGTGTGCTTGTGAATGCGAAGAAATG
CAAAGACCCCAATCTTGCGAGAGCTTTATATTACTTCTTATCATGGCTAT
GCAAGCCTGGAAACACAACAAATCTACTAGGTGTTGATGAAACATATCCA
AATGTTGAGCAAATACCAGGACTCAACACCCTTGGCATATCAACATATAG
TATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCTCGTG
CCACACTAATCTTCTCTACACTGGAAGGAACCATTTATGTCCGCTGTGTG
AAATCTGACCAACTGAATAACAACTCATGTTCAAAAGTCTAAAAAATGGA
GATGTCTTTAGTGTTTCACAAAGACTGACTCACTTACCAATCCAACATTA
AAAATAAAAATCACTTTCCTAATCCCCTTAAACAGCCGAATCCGCGAAGA
ATCTCCATAATCCACACCAAGTGTAGGGCGCAAATTCTAAAATACCATAT
TTCCAGCAATGGCTTTCATGTTCATCCCCAATATTTGAAAGAACTCCAGC
AAACTTTAATTAAGGATATGGAAAAGGAATTCCAGGCCACAAAAAATGAG
AAAAGGTTATCGCCCGTGATTCGATTCATGAATAACTAAAGGACTGATCA
AGAAAAGTGGTTGTACGATCCGCGGAGGAGGTATGATCTAGATAGAATTA
GGAAAACCCTGTTAATCCACCTCCCTAATTCAATAAAGTACTCTGCGAAT
AAACAAATAATACCATTGCAATAGACGTGCTGATACTCC
back to top