EY703463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.299e-74 Identity = 81/105 (77.14%), Postives = 92/105 (87.62%), Query Frame = 2 Query: 134 QKSTSVAGATKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLWFPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPE 448 QK+ S+ GATKASFLGGK+L + K A G+RSV+VSA AADP+RPLWFPGSTP EWLDGSLPGDFGFDPLGLGSDPE+L+WN Q+E+VH RWAMLGAA IFIPE Sbjct: 21 QKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPE 125 HSP 2 Score: 126.331 bits (316), Expect = 2.299e-74 Identity = 59/101 (58.42%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 454 TKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPT-------TSSPAPIWGTPVGFGLTHLLGIRFPRKVKXLXTRK 735 TK+G+LNTPSWYTAGE EYFTDTTTLF++E++ IGWAEG RWADIIKPGCVNTDPIFP P +W P+G+G P K+K L T++ Sbjct: 128 TKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGS------PAKIKELRTKE 222
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.085e-71 Identity = 73/106 (68.87%), Postives = 85/106 (80.19%), Query Frame = 2 Query: 134 QKSTSVAGATKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLWFPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 +++ S+ G TKASFLGG++L + K T RS + AADP+RPLWFPGSTP WLDGSLPGDFGFDPLGL SDPE+LRWN Q+E+VHCRWAMLGAA IFIPEL Sbjct: 21 RRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEL 126 HSP 2 Score: 127.487 bits (319), Expect = 5.085e-71 Identity = 62/101 (61.39%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 454 TKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPT-------TSSPAPIWGTPVGFGLTHLLGIRFPRKVKXLXTRK 735 TK+GILNTPSWYTAGE EYFTDTTTLFIVE++ IGWAEG RWADIIKPGCVNTDPIFP P +W P+G+G P K+K L T++ Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGS------PAKIKELRTKE 222
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.696e-33 Identity = 46/108 (42.59%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 134 QKSTSVAG--ATKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLWFPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 Q S ++ G K+ FLGG L + A ++ + + W PG +L GSLPGD GFDPLGL DPE LRW VQ+E+V+ RWAMLG A + +PE+ Sbjct: 7 QASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEV 114 HSP 2 Score: 76.6406 bits (187), Expect = 1.696e-33 Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 454 TKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPTTSSPAPIWGTPVG 669 T +GI+N P WY AG+ EYF ++TLF++E I + E RW DI PG VN DPIF S PA G P G Sbjct: 116 TSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGG 187
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.038e-32 Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 161 TKASFLGGKKLTLRKN------GATAGTRSVSVSAAAADPNRPLWFPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 +K FL G L ++ G++A T S V A + W PG ++L GSL GD GFDPLGL DPE L+W VQ+E+V+ RWAMLG A + +PE+ Sbjct: 18 SKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGE-----WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEV 115 HSP 2 Score: 75.8702 bits (185), Expect = 4.038e-32 Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 454 TKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPTTSSPAPIWGTPVG 669 TK+GI+N P WY AG+ +YF ++TLF++E I + E RW DI PG VN DPIF S P G P G Sbjct: 117 TKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGG 188
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.900e-23 Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 227 RSVSVSAAAADPNRPLWFPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 R V+V A + W PG +LDGSL GD GFDPL L DPE LRW VQ+++V+ RWAMLG A + IPE+ Sbjct: 26 RDVAVQAKGS------WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEV 94 HSP 2 Score: 49.6766 bits (117), Expect = 5.900e-23 Identity = 29/71 (40.85%), Postives = 36/71 (50.70%), Query Frame = 1 Query: 454 TKLGILNTPSWYTA-GELEYFTDTTTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPTTSSPAPIWGTP 663 TK G++N P W G+ YF ++T V M + E RW DI PG VN DPIF + S P G P Sbjct: 96 TKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYP 165
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.062e-19 Identity = 52/112 (46.43%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 149 VAGATKASFLGGKKLTLR------KNGATAGT--RSVSVSAAAADPNRPLWFPGST------PTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFI 442 V G T GGKK + K GA T R + V AAAA P + W P EWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAML IF+ Sbjct: 11 VNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKS-WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFV 121 HSP 2 Score: 28.1054 bits (61), Expect = 1.062e-19 Identity = 9/24 (37.50%), Postives = 13/24 (54.17%), Query Frame = 1 Query: 526 TLFIVEMIFIGWAEGXRWADIIKP 597 TL +++ +GW E RW D P Sbjct: 147 TLLGTQLLLMGWVESKRWVDFFDP 170 HSP 3 Score: 23.483 bits (49), Expect = 1.062e-19 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 654 GYPSGLWFDPLA 689 GYP G +FDPL+ Sbjct: 196 GYPGGKFFDPLS 207
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.313e-19 Identity = 44/107 (41.12%), Postives = 57/107 (53.27%), Query Frame = 2 Query: 140 STSVAGATKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLWFPGS------TPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFI 442 S+ + G K+ L L R GA R ++AAA + W P EWLDGSLPGD+GFDPLGLG DP L+W ++E++H RWAM IF+ Sbjct: 14 SSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAA----KKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV 116 HSP 2 Score: 28.8758 bits (63), Expect = 2.313e-19 Identity = 10/24 (41.67%), Postives = 13/24 (54.17%), Query Frame = 1 Query: 526 TLFIVEMIFIGWAEGXRWADIIKP 597 TL ++I +GW E RW D P Sbjct: 142 TLLGTQLILMGWVESKRWVDFFDP 165 HSP 3 Score: 24.6386 bits (52), Expect = 2.313e-19 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 654 GYPSGLWFDPLA 689 GYP G +FDPLA Sbjct: 191 GYPGGKFFDPLA 202
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.997e-19 Identity = 49/111 (44.14%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 140 STSVAGATKASFLGGKKLTLRKNGATAGTRSVS----VSAAAADPNRPLWFPGS------TPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFI 442 +T+V +SFL G K T GA R + V AAAA + W P EWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAM IF+ Sbjct: 6 ATAVLNGLSSSFLTGGKKTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV 116 HSP 2 Score: 24.6386 bits (52), Expect = 2.997e-19 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 654 GYPSGLWFDPLA 689 GYP G +FDPLA Sbjct: 191 GYPGGKFFDPLA 202 HSP 3 Score: 24.2534 bits (51), Expect = 2.997e-19 Identity = 7/20 (35.00%), Postives = 12/20 (60.00%), Query Frame = 1 Query: 526 TLFIVEMIFIGWAEGXRWAD 585 +L +++ +GW E RW D Sbjct: 142 SLLGTQLLLMGWVESKRWVD 161
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.776e-17 Identity = 41/87 (47.13%), Postives = 49/87 (56.32%), Query Frame = 2 Query: 224 TRSVSVSAAAADP------NRPLWFPGSTPTEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAARIFIPE 448 +R V AAA P +RPLWF +LDGSLPGD+GFDPLGL SDPE RW E+++ R+AMLGA PE Sbjct: 35 SRKGLVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPE 120 HSP 2 Score: 39.6614 bits (91), Expect = 1.776e-17 Identity = 25/70 (35.71%), Postives = 36/70 (51.43%), Query Frame = 1 Query: 493 AGELEYFTDTTTLFIVEMIFIGWAEGXRWADIIKPGC------VNTDPIFPTTSSPAPIWG---TPVGFG 675 AG Y+ D TLF++EM +G+AE R+ D KPG + + F + +PA G P+GFG Sbjct: 145 AGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFG 214
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.904e-17 Identity = 41/110 (37.27%), Postives = 53/110 (48.18%), Query Frame = 2 Query: 140 STSVAGATKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLWFPGSTPTEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAARIFIPEL 451 S S + +G + A+ R+ S NR LWF +LDG LPGDFGFDPLGL SDPE +W E+++ R+AMLGAA PE+ Sbjct: 11 SISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 119 HSP 2 Score: 39.2762 bits (90), Expect = 3.904e-17 Identity = 25/75 (33.33%), Postives = 37/75 (49.33%), Query Frame = 1 Query: 493 AGELEYFTDTTTLFIVEMIFIGWAEGXRWADIIKPGCV--------------NTDPIFPTTSSPAPIWGTPVGFG 675 AG Y+ D TLF++EM +G+AE R+ D KPG + + DP +P P++ P+GFG Sbjct: 143 AGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYP----GGPLF-NPLGFG 212 The following BLAST results are available for this feature:
BLAST of EY703463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >EY703463 ID=EY703463; Name=EY703463; organism=Citrus sinensis; type=EST; length=944bpback to top |