EY703461

Overview
NameEY703461
Unique NameEY703461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY703461 vs. ExPASy Swiss-Prot
Match: TM222_HUMAN (Transmembrane protein 222 OS=Homo sapiens GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.858e-31
Identity = 67/169 (39.64%), Postives = 98/169 (57.99%), Query Frame = 1 
Query:   43 IDPSRARFPCCIVWSPLPVISWLIPFVGHTGICREDGVILDFAGPNFVCVDSFAFGSATRYIQVNKEKCCISPYLSAFXXXXXXXXXXXXXXSLTWDDALRKSTQEFQHRSYNLFTCNCHSFVANNLNRLGF-NSGGWNVVNLAAFIFLKGQWVSKLAMVRTFLPFVII 546
            +D  R+RFP C+VW+P+PV++W  P +GH GIC   GVI DFAGP FV  D+ AFG   +Y +++  +   S                       WD A+  +++E++HR +NL   NCHS VA  LN + + NS  WN+V L  F  L G++VS  A V+T+LPF+++
Sbjct:   45 MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAKYWKLDPAQVYAS-------------------GPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILL 194
[Close]
BLAST of EY703461 vs. ExPASy Swiss-Prot
Match: TM222_MOUSE (Transmembrane protein 222 OS=Mus musculus GN=Tmem222 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.846e-30
Identity = 66/169 (39.05%), Postives = 98/169 (57.99%), Query Frame = 1 
Query:   43 IDPSRARFPCCIVWSPLPVISWLIPFVGHTGICREDGVILDFAGPNFVCVDSFAFGSATRYIQVNKEKCCISPYLSAFXXXXXXXXXXXXXXSLTWDDALRKSTQEFQHRSYNLFTCNCHSFVANNLNRLGF-NSGGWNVVNLAAFIFLKGQWVSKLAMVRTFLPFVII 546
            +D  R+RFP C+VW+P+PV++W  P +GH GIC   GVI DFAGP FV  D+ AFG   ++ +++  +   S                       WD A+  +++E++HR +NL   NCHS VA  LN + + NS  WN+V L  F  + G++VS  A V+T+LPFV++
Sbjct:   45 MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAKFWKLDPGQVYAS-------------------GPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLL 194
The following BLAST results are available for this feature:
BLAST of EY703461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TM222_HUMAN4.858e-3139.64Transmembrane protein 222 OS=Homo sapiens GN=TMEM2... [more]
TM222_MOUSE1.846e-3039.05Transmembrane protein 222 OS=Mus musculus GN=Tmem2... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-019-H02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703461 ID=EY703461; Name=EY703461; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGGATGGAAGAAAGTTATCAACCAAATATGCAAATTGATCC
AAGTAGAGCAAGGTTTCCGTGCTGCATTGTTTGGTCACCTCTTCCTGTCA
TATCTTGGCTGATTCCTTTTGTTGGTCACACTGGCATATGCAGAGAGGAT
GGAGTAATTTTGGATTTTGCAGGGCCTAATTTCGTGTGTGTTGACAGTTT
TGCCTTTGGGTCAGCAACTCGCTACATTCAAGTGAACAAGGAAAAGTGTT
GTATTTCCCCCTATTTGTCTGCATTTGATGGTGATGACCACCACCAGCTG
GGTGGACAAGGAAGTGACTCATTGACATGGGATGATGCACTACGAAAGAG
TACACAGGAGTTCCAACACCGATCTTATAACCTTTTTACTTGCAATTGCC
ACTCCTTTGTAGCCAACAACCTGAACAGATTGGGTTTTAATTCTGGTGGG
TGGAATGTGGTGAACCTCGCAGCTTTCATTTTCCTTAAAGGACAATGGGT
GAGCAAACTGGCCATGGTGAGAACTTTCTTACCATTCGTTATTATAACCC
TTCTTGGACAACATTTGGGGGTTTAACCTATATAACTTTCGTGGCCTTCT
TTACCTTCCTTCTGTNGGGTGGTTCCTTCTTGGTACTTACTGTTTCAAGG
CTGGNATACTCTNGTANCTNANTTGCTTGATTGTCATGATGTATAAAAAT
GGTAGGTCAAGAGTGTACACAATTTAGGTTCTATACAATTGAATATCNAG
ATACTTTGACCAGGAATGNATGAATGATGTTGTATCCTCTATTTCATCAC
TGTTCTCGNAAAACAAGTCGGGCACAAAAAAAAAAAAAAAGCGGCGCTTT
AAGGATCAAGCTACTACCCTGCCTGCAATGATAACTT
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