EY703457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 1.155e-70 Identity = 146/273 (53.48%), Postives = 165/273 (60.44%), Query Frame = 1 Query: 61 MASWVLSECGLKPLPHIFPRPRTG-----INPSKARFLHSKKSLTDLKLPLVKC-SGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVRMMNPLHPCLRKL-QDF**CNKILRFKFLF-LACYP-FIFE*SPG 852 MASWVLSECGL+PLP ++P+PRTG NP+K RF S TDL C S R++NW L+VSAPLRV +E E+ FDPGAPPPFKL+DIR AIPKHCWVKDPW+SM Y PLYW A TMFWALFVLGHDCGHGSFSND KLNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHV HP K+ ++ K LRF F L YP +++ SPG Sbjct: 1 MASWVLSECGLRPLPRVYPKPRTGHPLLNSNPTKLRF-----SRTDLGNGSSFCLSSGILREKNWALRVSAPLRVLQVEEEEENKEGERVINGGEE----------FDPGAPPPFKLSDIREAIPKHCWVKDPWRSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNDPKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYKNLDTATKKLRFTLPFPLLAYPIYLWSRSPG 258
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.508e-70 Identity = 146/279 (52.33%), Postives = 167/279 (59.86%), Query Frame = 1 Query: 61 MASWVLSECGLKPLPHIFPRPRTGI---NPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVRMMNPLHPCLRKL-QDF**CNKILRF--KFLFLACYPFIFE*SPGNLFS-LDPT 876 MA+W +CGLKPL + PRPRTG + S+ FL + K + K ++C+ R+RNWGLKVSAPLRVA +E E FDPGAPPPF LADIRAAIPKHCWVKDPW+SMSY PLYWAA GTMFWALFVLGHDCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQ+HGH HP KL + ++LRF F LA ++F SPG S DP+ Sbjct: 1 MATWYHQKCGLKPLAPVIPRPRTGAALSSTSRVEFLDTNKVVAGPKFQPLRCN---LRERNWGLKVSAPLRVASIEEEQKSVDLTNGTNGVEHEKLPE-----FDPGAPPPFNLADIRAAIPKHCWVKDPWRSMSYVVRDVIAVFGLAAAAAYLNNWLVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNSKLNSVVGHLLHSSILVPYHGWRISHRTHHQHHGHAENDESWHPLPEKLFRSLDTVTRMLRFTAPFPLLAFPVYLFSRSPGKTGSHFDPS 271
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 9.467e-65 Identity = 138/271 (50.92%), Postives = 154/271 (56.83%), Query Frame = 1 Query: 64 ASWVLSECGLKPLPHIFPRPRTGI-----NPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVRMMNPLHPCLRKL-QDF**CNKILRFKFLF-LACYPF-IFE*SPG 852 A WVLSECGL+PLP I+ RPR G N K R L KS +L S S+ NW L V+ P+ V+ + GED FD GAPPPF LADIRAAIPKHCWVK+PW+SMSY PLYW GTMFWALFVLGHDCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHV HP K+ + K LRF F + YPF ++ SPG Sbjct: 3 AGWVLSECGLRPLPRIYSRPRIGFTSKTTNLLKLRELPDSKSY-NLCSSFKVSSWSNSKQSNWALNVAVPVNVSTVSGEDDREREEFNGIVNVDEGKGEF----FDAGAPPPFTLADIRAAIPKHCWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFKSLDNVTKTLRFSLPFPMLAYPFYLWSRSPG 268
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.511e-62 Identity = 142/279 (50.90%), Postives = 160/279 (57.35%), Query Frame = 1 Query: 61 MASWVLSECGLKPLPHIFPRPRTGI--NPSKARFLHSKKSLTDLKLPLVKCSGDFSRD---RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVRMMNPLHPCLRKLQDF**CNKILR-FKF---LFLACYPF-IFE*SPG 852 MA+ VLSECG++PLP I+ PR+ N +K R S S PL G SRD RNW L VS PL +PLE ++ FDPGAPPPF LADIRAAIPKHCWVK+PWKS+SY PLYW A GTMFWALFVLGHDCGHGSFSND KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHV HP K+ + +K R F+F L + YPF ++ SPG Sbjct: 1 MANLVLSECGIRPLPRIYTTPRSNFLSNNNKFRPSLSSSSYKTSSSPL--SFGLNSRDGFTRNWALNVSTPLTTPIFEESPLEEDNKQR---------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYNT--LDKPTRFFRFTLPLVMLAYPFYLWARSPG 254
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 3.152e-60 Identity = 127/267 (47.57%), Postives = 145/267 (54.31%), Query Frame = 1 Query: 61 MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVRMMNPLHPCLRKL-QDF**CNKILRFKFLF-LACYPF-IFE*SPG 852 MAS VLSECG +PLP +P+ T + L L G +S+ RNW L V+ PL E+ FDPGAPPPF LADIRAAIPKHCWVK+PW SMSY PLYW A GTMFWALFVLGHDCGHGSFSND +LNSV GHLLHSSILVPYHGWRISHRTHHQNHGHV HP + ++ ++ RF F + YPF ++ SPG Sbjct: 1 MASSVLSECGFRPLPRFYPKHTTSFASNPKPTFKFNPPLKPPSSLLNSRYGFYSKTRNWALNVATPLTTLQSPSEEDTER--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPG 247
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.979e-54 Identity = 115/216 (53.24%), Postives = 125/216 (57.87%), Query Frame = 1 Query: 229 RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVRMMNPLHPCLRKL-QDF**CNKILRFKF-LFLACYPF-IFE*SPG 852 RNW L V+ PL V P+E E FDPGAPPPF LADIRAAIPKHCWVK+PWKSMSY PLYW A GTMFWALFVLGHDCGHGSFSND +LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHV HP K+ + + RF L + YPF ++ SPG Sbjct: 17 RNWALNVTTPLTVDSSSSPPIEEEPKTQR--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYKSLDKPTRFFRFTLPLVMLAYPFYLWARSPG 212
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.794e-47 Identity = 95/167 (56.89%), Postives = 109/167 (65.27%), Query Frame = 1 Query: 361 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVRMMNPLHPCLRKL-QDF**CNKILRFKFLF-LACYPF-IFE*SPG 852 FDPGAPPPFK+ADIRAAIPKHCW K +S+SY PLYW A GTMFWALFVLGHDCGHGSFSN KLNS VGH+LHS ILVPY+GWRISHRTHHQNHGHV P K+ ++ ++LR+ F F + YPF ++ SPG Sbjct: 22 FDPGAPPPFKIADIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAISFNSWFFWPLYWPAQGTMFWALFVLGHDCGHGSFSNSSKLNSFVGHILHSLILVPYNGWRISHRTHHQNHGHVEKDESWVPLTEKVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPG 188
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.770e-46 Identity = 92/167 (55.09%), Postives = 108/167 (64.67%), Query Frame = 1 Query: 361 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVRMMNPLHPCLRKLQD-F**CNKILRFKFLF-LACYP-FIFE*SPG 852 FDP APPPF+LA+IR IPKHCWVKDP +S+SY PLYWA GTMFWA+FVLGHDCGHGSFS+ LN+VVGH+LHS+ILVPYHGWRISH+THHQNHG+V P KL + K LR+K F L YP ++ + SPG Sbjct: 22 FDPSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAIHLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPLLAYPMYLMKRSPG 188
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.285e-45 Identity = 90/167 (53.89%), Postives = 109/167 (65.27%), Query Frame = 1 Query: 361 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVRMMNPLHPCLRKL-QDF**CNKILRFKFLF-LACYP-FIFE*SPG 852 FDP APPPFK+A+IRA+IPKHCWVK+PW+S+SY +Y GTMFWALFVLGHDCGHGSFS+ LNS+VGH+LHSSILVPYHGWRISHRTHHQNHGH+ P K+ ++ +++RF F L YP ++F SPG Sbjct: 25 FDPSAPPPFKIAEIRASIPKHCWVKNPWRSLSYVLRDVLVIAALVAAAIHFDNWLLWLIYCPIQGTMFWALFVLGHDCGHGSFSDSPLLNSLVGHILHSSILVPYHGWRISHRTHHQNHGHIEKDESWVPLTEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPG 191
BLAST of EY703457 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 8.332e-45 Identity = 82/122 (67.21%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 361 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHV 726 FDP A PPFK+ DIRAAIPKHCWVK P +SMSY PLYWAA GT+FWA+FVLGHDCGHGSFS+ LNSVVGH+LHS ILVPYHGWRISHRTHHQNHGHV Sbjct: 26 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHV 147 The following BLAST results are available for this feature:
BLAST of EY703457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY703457 ID=EY703457; Name=EY703457; organism=Citrus sinensis; type=EST; length=933bpback to top |