EY703455

Overview
NameEY703455
Unique NameEY703455
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRIA_PEA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum GN=petC PE=2 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 9.663e-96
Identity = 163/218 (74.77%), Postives = 186/218 (85.32%), Query Frame = 2
Query:    5 ASVCSIKSGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHAN--IENGKVVFVPWTETRFRTGEAPWW 652
            + +CS KSG+ CPS A LVKP RTQM  +   GMKI CQATSIPADRVPDM KR+ +NLLLLGA+SLPT  MLVPY +F  PPG GS+ GGT AKDA+GND++A +WL TH PGDRTLT+GLKGDPTYLVVEKD+TLA++ INAVCTHLGCVVP+N AENKFICPCHGSQYN+QGRVVRGPAPLSLALAH +  +E+GKVVFVPW ET FRTG+APWW
Sbjct:   12 SQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPDMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKTHAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWW 229          
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRIA_ARATH (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thaliana GN=petC PE=1 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.395e-94
Identity = 162/215 (75.35%), Postives = 183/215 (85.12%), Query Frame = 2
Query:   17 SIKSGMFCPSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETRFRTGEAPWW 652
            S +S +   S    VKP +   QMV K  +G++I CQA+SIPADRVPDM KR+ +NLLLLGA+SLPTG+MLVPYATFF PPG G  GGGT AKDA+GND++AA+WL THGPGDRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN AENKF+CPCHGSQYN QGRVVRGPAPLSLALAHA+I E GKV+FVPW ET FRTG+APWW
Sbjct:   14 SSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRVPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWW 228          
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRIA_SPIOL (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea GN=petC PE=1 SV=2)

HSP 1 Score: 345.895 bits (886), Expect = 1.822e-94
Identity = 162/218 (74.31%), Postives = 187/218 (85.78%), Query Frame = 2
Query:    5 ASVCSIKSGMFCPSRAFLVKPARTQMVTKNPM--GMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETRFRTGEAPWW 652
            + +CS K+GMF PS A L K  R  ++       GMK+ CQATSIPAD VPDM KR+ +NLLLLGA+SLPTG+ML+PYA+FF PPG G+  GGT AKDA+GND+IAA+WL TH PGDRTLT+GLKGDPTYLVVE DKTLA++GINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQGRVVRGPAPLSLALAH ++++GKVVFVPWTET FRTGEAPWW
Sbjct:   12 SQLCSSKNGMFAPSLA-LAKAGRVNVLISKERIRGMKLTCQATSIPADNVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWW 228          
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRIB_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacum GN=petC2 PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.106e-91
Identity = 163/219 (74.43%), Postives = 185/219 (84.47%), Query Frame = 2
Query:   11 VCSIKSGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETRFRTGEAPWW 652
            +CS KSG+   S+  L+KP +   +  + +G    MK+KC ATSIPAD RVPDM KR LMNLLLLGA+SLPT  MLVPYATFFAPPG G   GGT AKDA+GND+IA++WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA+I++GKVVFVPW ET FRTGEAPWW
Sbjct:   12 LCSSKSGLSSVSQCLLLKPMK---INSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWW 227          
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRIA_FRIAG (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrestis GN=petC PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 3.217e-91
Identity = 156/217 (71.89%), Postives = 176/217 (81.11%), Query Frame = 2
Query:    5 ASVCSIKSGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETRFRTGEAPWW 652
            + + + K+G + PSRA L K AR     K  +  K+ CQATSIPADRVPDMGKRQ MNLLLLGA+SLPT  ML+PY  FF PP  G  GGG  AKDA+GNDI+AA WL THGPGDRTL +GL+GDPTYLVVE D++LA+YGINAVCTHLGCVVPWN AENKF+CPCHGSQYNNQG+VVRGPAPLSLAL+H +I E GKVVFVPW ET FRTGE PWW
Sbjct:   13 SQLSAAKNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRVPDMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWLKTHGPGDRTLAQGLRGDPTYLVVENDRSLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNNQGKVVRGPAPLSLALSHCDISEEGKVVFVPWVETDFRTGENPWW 229          
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRIA_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum GN=petC1 PE=2 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 2.085e-90
Identity = 161/219 (73.52%), Postives = 182/219 (83.11%), Query Frame = 2
Query:   11 VCSIKSGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETRFRTGEAPWW 652
            +CS KSG+   S+  LVKP +   +  + +G    MK+KC ATSIPAD RVPDM KR LMNLLLLGA+SLPT  MLVPY TFF PPG G   GGT AKDA+GND+IA++WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA+I++GKVVFVPW ET FRTGE PWW
Sbjct:   12 LCSSKSGLSSVSQCLLVKPMK---INSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWW 227          
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRIA_SOLTU (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum GN=petC PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.645e-90
Identity = 160/221 (72.40%), Postives = 181/221 (81.90%), Query Frame = 2
Query:    5 ASVCSIKSGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETRFRTGEAPWW 652
            + +CS KSG+   S+A LVKP +   +  + MG    MK KC A SIPAD RVPDM KR LMNLLLLGA++LPTG MLVPYATFFAPPG G    GT AKDA GND++  +WL TH PG RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVPWN+AENKFICPCHGSQYNNQG+VVRGPAPLSLALAHA+I++GKVVFVPW ET FRTG++PWW
Sbjct:   12 SQLCSSKSGVSSVSQALLVKPMK---INGHGMGKDKRMKAKCMAASIPADDRVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTEWLKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWW 229          
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRIA_ORYSJ (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza sativa subsp. japonica GN=petC PE=1 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 6.278e-87
Identity = 153/209 (73.21%), Postives = 172/209 (82.30%), Query Frame = 2
Query:   38 CPSRAFLVKPARTQMVTKNPM---GMKIKCQA-TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETRFRTGEAPWW 652
            C SRA L KP +     +  +      I CQA +SIPADRVPDMGKRQLMNLLLLGA+SLPT  MLVPY  FF P G G+AGGG  AKD +GND++A +WL THGP DRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKFICPCHGSQYNNQGRVVRGPAPLSLAL HA++++GKV+FVPW ET FRTG+ PWW
Sbjct:   16 CRSRASLGKPVKGLGFGRERVPRTATTITCQAASSIPADRVPDMGKRQLMNLLLLGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEWLKTHGPNDRTLTQGLKGDPTYLVVEADKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALVHADVDDGKVLFVPWVETDFRTGDNPWW 224          
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRIA_WHEAT (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Triticum aestivum GN=petC PE=2 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.890e-83
Identity = 145/206 (70.39%), Postives = 164/206 (79.61%), Query Frame = 2
Query:   38 CPSRAF-LVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETRFRTGEAPWW 652
            C +RA  L KP +     +  +   I C A SI ADRVPDM KR+LMNLLLLGA+SLPT  MLVPY +F  P G GS  GG  AKD +GNDI+  DWL THGP DRTL +GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKF+CPCHGSQYNNQG+VVRGPAPLSLAL HA++++GKVVFVPW ET FRTG+ PWW
Sbjct:   16 CRTRASSLCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNAAENKFLCPCHGSQYNNQGKVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGDNPWW 221          
BLAST of EY703455 vs. ExPASy Swiss-Prot
Match: UCRI_MICAN (Cytochrome b6-f complex iron-sulfur subunit OS=Microcystis aeruginosa (strain NIES-843) GN=petC PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.239e-67
Identity = 115/170 (67.65%), Postives = 136/170 (80.00%), Query Frame = 2
Query:  146 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETRFRTGEAPWW 652
            VPD+G+RQ MNLL  G ++      L P   +F PP  G  GGG TAKDA+GND+I + +L +H  GDRTL +GLKGDPTYLVV++DKTLA+YGINAVCTHLGCVVPWN++E KF+CPCHGSQYN +G+VVRGPAPLSLALAHAN+ +N KVVF  WTET FRTGE PWW
Sbjct:    9 VPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQFLTSHNAGDRTLAQGLKGDPTYLVVQEDKTLANYGINAVCTHLGCVVPWNASEEKFMCPCHGSQYNAEGKVVRGPAPLSLALAHANVTDNDKVVFSTWTETDFRTGEEPWW 178          
The following BLAST results are available for this feature:
BLAST of EY703455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
UCRIA_PEA9.663e-9674.77Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_ARATH1.395e-9475.35Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_SPIOL1.822e-9474.31Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIB_TOBAC1.106e-9174.43Cytochrome b6-f complex iron-sulfur subunit 2, chl... [more]
UCRIA_FRIAG3.217e-9171.89Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_TOBAC2.085e-9073.52Cytochrome b6-f complex iron-sulfur subunit 1, chl... [more]
UCRIA_SOLTU4.645e-9072.40Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_ORYSJ6.278e-8773.21Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_WHEAT1.890e-8370.39Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRI_MICAN3.239e-6767.65Cytochrome b6-f complex iron-sulfur subunit OS=Mic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-019-G08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703455 ID=EY703455; Name=EY703455; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGTATGCTCAATCAAGAGTGGTATGTTCTGTCCATCGAGAG
CTTTTCTTGTGAAACCAGCAAGGACCCAGATGGTGACAAAGAATCCAATG
GGAATGAAGATCAAGTGCCAGGCTACAAGTATTCCAGCTGATAGAGTGCC
TGATATGGGCAAGAGGCAGCTCATGAATTTGCTTCTCTTGGGTGCTGTTT
CTCTTCCCACTGGATTTATGTTGGTTCCTTATGCGACCTTCTTTGCCCCA
CCTGGTTTAGGAAGTGCTGGTGGTGGTACTACTGCCAAGGATGCCATTGG
CAATGACATCATTGCCGCTGATTGGCTTAACACGCACGGCCCTGGGGACC
GAACCCTCACCGAAGGATTGAAGGGAGATCCAACCTACCTTGTTGTGGAA
AAAGACAAAACACTTGCATCATATGGAATCAATGCTGTCTGCACTCACCT
TGGATGTGTGGTGCCATGGAATTCAGCTGAGAACAAGTTCATCTGTCCCT
GCCACGGATCCCAATACAATAACCAAGGAAGAGTTGTGAGAGGGCCTGCT
CCATTGTCATTGGCATTGGCTCATGCCAACATTGAAAATGGTAAGGTAGT
CTTCGTTCCATGGACGGAAACCAGATTCAGAACTGGTGAAGCTCCATGGT
GGGGCTTAAACTGNTCCAGTGCCTGTGCTTTCAATATTCAAGTTTGCCGG
TCGGTTNGCTTTGCCGTACTGCATAACATACTGTACGGAACATGCTTATC
ANAATGAAGCTTACACATGTAAAGCTACTTGGCCTGATCATGCTATCTTG
TAATCTTGGCATCTTGACATTTTCTCTATCATTCTTCTTTGTTCTCAAAA
TCAACGCTCACATGGATGCTACAGTTCACGTGGGATTAG
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