EY703451

Overview
NameEY703451
Unique NameEY703451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703451 vs. ExPASy Swiss-Prot
Match: NED1_SCHPO (Nuclear elongation and deformation protein 1 OS=Schizosaccharomyces pombe GN=ned1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.046e-18
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 3
Query:   27 LLNL*QDGYAVPSGPVVISPDGLFLLLFRGVILRPPHEFKIVCL*DIKILF--PYHYHPFYAGFGNSHSDELNYTKIGIPKGKIFMINPKGEVAI------SHRIDVNSYTCLHTLDNDMFPP 371
            L N+ Q+GY++P GPV++SPD     L R VILR P  FK+ CL D+  +F  P    PFYAGFGN  +D ++Y  + +P  +IF IN  GEV I       HR   +SY  ++ L +  FPP
Sbjct:  442 LRNIEQNGYSLPDGPVILSPDRTMAALHREVILRKPEVFKMACLRDLCNIFALPVPRTPFYAGFGNRITDAISYNHVRVPPTRIFTINSAGEVHIELLQRSGHR---SSYVYMNELVDHFFPP 561          
BLAST of EY703451 vs. ExPASy Swiss-Prot
Match: LPIN1_MOUSE (Phosphatidate phosphatase LPIN1 OS=Mus musculus GN=Lpin1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 3
Query:   48 GYAVPSGPVVISPDGLFLLLFRGVILRPPHEFKIVCL*DIKILFPYHYHPFYAGFGNSHSDELNYTKIGIPKGKIFMINPKGEVAISH-RIDVNSYTCLHTLDNDMFP 368
            G  +P GP+++SP  LF  L R VI + P +FK+ CL DIK LF  +  PFYA FGN  +D  +Y ++G+   +IF +NPKGE+   H + +++SY  L  + + +FP
Sbjct:  778 GTVLPQGPLLLSPSSLFSALHREVIEKKPEKFKVQCLTDIKNLFFPNTEPFYAAFGNRPADVYSYKQVGVSLNRIFTVNPKGELVQEHAKTNISSYVRLCEVVDHVFP 885          
BLAST of EY703451 vs. ExPASy Swiss-Prot
Match: LPIN1_HUMAN (Phosphatidate phosphatase LPIN1 OS=Homo sapiens GN=LPIN1 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 3
Query:   48 GYAVPSGPVVISPDGLFLLLFRGVILRPPHEFKIVCL*DIKILFPYHYHPFYAGFGNSHSDELNYTKIGIPKGKIFMINPKGEVAISH-RIDVNSYTCLHTLDNDMFP 368
            G  +P GP+++SP  LF  L R VI + P +FK+ CL DIK LF  +  PFYA FGN  +D  +Y ++G+   +IF +NPKGE+   H + +++SY  L  + + +FP
Sbjct:  744 GTVLPQGPLLLSPSSLFSALHREVIEKKPEKFKVQCLTDIKNLFFPNTEPFYAAFGNRPADVYSYKQVGVSLNRIFTVNPKGELVQEHAKTNISSYVRLCEVVDHVFP 851          
BLAST of EY703451 vs. ExPASy Swiss-Prot
Match: LPIN2_MOUSE (Phosphatidate phosphatase LPIN2 OS=Mus musculus GN=Lpin2 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 3
Query:   48 GYAVPSGPVVISPDGLFLLLFRGVILRPPHEFKIVCL*DIKILFPYHYHPFYAGFGNSHSDELNYTKIGIPKGKIFMINPKGEVAISHRIDVN--SYTCLHTLDNDMFP 368
            G  +P GP+++SP  LF    R VI + P +FKI CL DIK LF     PFYA FGN  +D   YT++G+P  +IF +NPKGE+ I  R   N  SY  L  L   +FP
Sbjct:  752 GTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSRQPFYAAFGNRPNDVYAYTQVGVPDCRIFTVNPKGEL-IQERTKGNKSSYHRLSELVEHVFP 859          
BLAST of EY703451 vs. ExPASy Swiss-Prot
Match: LPIN2_HUMAN (Phosphatidate phosphatase LPIN2 OS=Homo sapiens GN=LPIN2 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 3
Query:   48 GYAVPSGPVVISPDGLFLLLFRGVILRPPHEFKIVCL*DIKILFPYHYHPFYAGFGNSHSDELNYTKIGIPKGKIFMINPKGEVAISHRIDVN--SYTCLHTLDNDMFP 368
            G  +P GP+++SP  LF    R VI + P +FKI CL DIK LF     PFYA FGN  +D   YT++G+P  +IF +NPKGE+ I  R   N  SY  L  L   +FP
Sbjct:  755 GTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGNRPNDVYAYTQVGVPDCRIFTVNPKGEL-IQERTKGNKSSYHRLSELVEHVFP 862          
BLAST of EY703451 vs. ExPASy Swiss-Prot
Match: LPIN3_HUMAN (Phosphatidate phosphatase LPIN3 OS=Homo sapiens GN=LPIN3 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 3
Query:   42 QDGYAVPSGPVVISPDGLFLLLFRGVILRPPHEFKIVCL*DIKILFPYHYHPFYAGFGNSHSDELNYTKIGIPKGKIFMINPKGEV 299
            + G ++P GP+++SP  LF  L R VI + P  FK+ CL DI+ LF  H  PFYA FGN  +D   Y ++G+P+ +IF +NP+GE+
Sbjct:  708 EGGCSLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPHGQPFYAAFGNRPNDVFAYRQVGLPESRIFTVNPRGEL 793          
BLAST of EY703451 vs. ExPASy Swiss-Prot
Match: SMP2_YEAST (Protein SMP2 OS=Saccharomyces cerevisiae GN=SMP2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.847e-16
Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 3
Query:   15 T*SKLLNL*QDGYAVPSGPVVISPDGLFLLLFRGVILRPPHEFKIVCL*DIKILF----------PYHYHPFYAGFGNSHSDELNYTKIGIPKGKIFMINPKGEVAI------SHRIDVNSYTCLHTLDNDMFPPTLL 380
            T S L ++ Q+G  +P+GPV++SPD     L R VIL+ P  FKI CL DI+ L+               PF+AGFGN  +D L+Y  +GIP  +IF IN +GEV +       +R   +SY  ++ L +  FPP  L
Sbjct:  453 TRSYLRSIEQNGSKLPNGPVILSPDRTMAALRREVILKKPEVFKIACLNDIRSLYFEDSDNEVDTEEKSTPFFAGFGNRITDALSYRTVGIPSSRIFTINTEGEVHMELLELAGYR---SSYIHINELVDHFFPPVSL 587          
BLAST of EY703451 vs. ExPASy Swiss-Prot
Match: LPIN3_MUSSP (Phosphatidate phosphatase LPIN3 OS=Mus spretus GN=Lpin3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16
Identity = 44/116 (37.93%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   42 QDGYAVPSGPVVISPDGLFLLLFRGVILRPPHEFKIVCL*DIKILFPYHYHPFYAGFGNSHSDELNYTKIGIPKGKIFMINPKG----EVAISHRIDVNSYTCLHTLDNDMFPPTL 377
            + G  +P GP+++SP  LF  L R VI + P  FK+ CL DI+ LF     PF+A FGN  +D   Y ++G+P+ +IF +NP+G    E+  SH+   ++Y  L  +   +FPP +
Sbjct:  704 EHGCGLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPQRQPFHAAFGNRPNDVFAYRQVGLPESRIFTVNPRGELIQELIKSHK---STYQRLGEVVELLFPPVV 816          
BLAST of EY703451 vs. ExPASy Swiss-Prot
Match: LPIN3_MOUSE (Phosphatidate phosphatase LPIN3 OS=Mus musculus GN=Lpin3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16
Identity = 44/116 (37.93%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   42 QDGYAVPSGPVVISPDGLFLLLFRGVILRPPHEFKIVCL*DIKILFPYHYHPFYAGFGNSHSDELNYTKIGIPKGKIFMINPKG----EVAISHRIDVNSYTCLHTLDNDMFPPTL 377
            + G  +P GP+++SP  LF  L R VI + P  FK+ CL DI+ LF     PF+A FGN  +D   Y ++G+P+ +IF +NP+G    E+  SH+   ++Y  L  +   +FPP +
Sbjct:  705 EHGCGLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPQRQPFHAAFGNRPNDVFAYRQVGLPESRIFTVNPRGELIQELIKSHK---STYQRLGEVVELLFPPVV 817          
The following BLAST results are available for this feature:
BLAST of EY703451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
NED1_SCHPO1.046e-1843.09Nuclear elongation and deformation protein 1 OS=Sc... [more]
LPIN1_MOUSE5.189e-1841.67Phosphatidate phosphatase LPIN1 OS=Mus musculus GN... [more]
LPIN1_HUMAN5.189e-1841.67Phosphatidate phosphatase LPIN1 OS=Homo sapiens GN... [more]
LPIN2_MOUSE3.363e-1745.87Phosphatidate phosphatase LPIN2 OS=Mus musculus GN... [more]
LPIN2_HUMAN3.363e-1745.87Phosphatidate phosphatase LPIN2 OS=Homo sapiens GN... [more]
LPIN3_HUMAN4.393e-1745.35Phosphatidate phosphatase LPIN3 OS=Homo sapiens GN... [more]
SMP2_YEAST2.847e-1639.13Protein SMP2 OS=Saccharomyces cerevisiae GN=SMP2 P... [more]
LPIN3_MUSSP4.857e-1637.93Phosphatidate phosphatase LPIN3 OS=Mus spretus GN=... [more]
LPIN3_MOUSE4.857e-1637.93Phosphatidate phosphatase LPIN3 OS=Mus musculus GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-019-G04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703451 ID=EY703451; Name=EY703451; organism=Citrus sinensis; type=EST; length=684bp
CCACGCGTCCGCTCACCTAAAGTAAATTGCTCAACCTGTGACAGGATGGT
TACGCTGTGCCCAGTGGACCTGTGGTCATTTCACCGGATGGATTATTCCT
CTTGTTGTTCCGTGGAGTAATTCTAAGACCACCTCATGAATTCAAGATAG
TTTGTTTATAGGATATTAAAATACTCTTCCCATATCACTACCATCCATTC
TATGCTGGCTTTGGAAATTCACATTCTGATGAGCTCAACTACACGAAGAT
TGGGATCCCAAAGGGAAAAATTTTTATGATTAACCCAAAGGGAGAGGTGG
CCATTAGTCACCGTATTGATGTTAATTCTTATACATGTCTACACACTCTC
GACAATGACATGTTTCCACCAACACTCTTGGTTGAGCACAGAGGATTATA
ACTCATGGAACTTTCTGCAGATTCCATTACCCGAAATTGAGATATATCGG
GTGGTTTGTTGACACGGATCCTTTATACCAACATAAGACAAGGTGATCAA
TGGCCTGGAGTTCCCGGAAAAATGTGATAAGCTTGACATTCGACATTTCT
ATCCCAAATGCGGGCCAGATACGATCCGATGATAGAGTCATGTGTGCATC
TGGCTCCTGTATATGATTTGCCAACNGTTCATCTTGAACTGAAAGTGCAC
TGCCGTCTATAGATTACAGCTCTCCTACACAAAA
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