EY703444

Overview
NameEY703444
Unique NameEY703444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY703444_ssr184 microsatellite EY703444_ssr184:184..193. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY703444 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.037e-32
Identity = 59/119 (49.58%), Postives = 67/119 (56.30%), Query Frame = 1
Query:   79 YPHVGPMRELNCALESCWDGNIIAYDLQTVYADLGLSLWKQMSHAGIKYITHDTFFYYQLMLYTLVMLCGEPSRYNGDRREKEYDVYLSMDTRNTDDGDIEMTKRLYANNHGTDPDSGP 435
            YP +GP REL  ALES WD    A DLQ V ADL  S+WKQM+ AGIKYI  +TF YY  +L T  ML   P RYN    E  +D Y SM   N     +EMTK    N H   P+ GP
Sbjct:    8 YPRMGPKRELKFALESFWDKKSSAEDLQKVAADLRSSIWKQMADAGIKYIPSNTFSYYDQVLDTATMLGAVPPRYNFAGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHYIVPELGP 126          

HSP 2 Score: 56.9954 bits (136), Expect = 1.037e-32
Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 3
Query:  420 P*LGTLMKDLVDHHRVATESQDAKVLVMETGPGLLG-----LRIPDAE*T*HGVAKTLPLFSVISRTRPIYNEIYGELDAACAYRMHCDEPSLVMDVDS 701
            P LG  +      H+   E ++AK L ++T P L+G     L    A+    GV KT PL S++ +  P+Y E+ GEL AA A  +  DEP+LV+D++S
Sbjct:  122 PELGPEVNFSYASHKAVNEYKEAKELGVDTVPVLVGPVTFLLLSKPAK----GVEKTFPLLSLLDKILPVYKEVIGELKAAGASWIQFDEPTLVLDLES 216          

HSP 3 Score: 20.7866 bits (42), Expect = 1.037e-32
Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 3
Query:   57 MASDIIGIPTRGP 95
            MAS I+G P  GP
Sbjct:    1 MASHIVGYPRMGP 13          
BLAST of EY703444 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.417e-31
Identity = 60/119 (50.42%), Postives = 69/119 (57.98%), Query Frame = 1
Query:   79 YPHVGPMRELNCALESCWDGNIIAYDLQTVYADLGLSLWKQMSHAGIKYITHDTFFYYQLMLYTLVMLCGEPSRYNGDRREKEYDVYLSMDTRNTDDGDIEMTKRLYANNHGTDPDSGP 435
            YP +GP REL  ALES WDG   A DL+ V ADL  S+WKQM+ AGIKYI  +TF YY  +L T  ML   P RY     E E+DVY SM   N     +EMTK    N H   P+ GP
Sbjct:    8 YPRMGPKRELKFALESFWDGKSTAEDLKKVSADLRSSIWKQMADAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYGWTGGEIEFDVYFSMARGNASVPAMEMTKWFDTNYHFIVPELGP 126          

HSP 2 Score: 48.521 bits (114), Expect = 1.417e-31
Identity = 35/99 (35.35%), Postives = 51/99 (51.52%), Query Frame = 3
Query:  420 P*LGTLMKDLVDHHRVATESQDAKVLVMETGPGLLG-----LRIPDAE*T*HGVAKTLPLFSVISRTRPIYNEIYGELDAACAYRMHCDEPSLVMDVDS 701
            P LG  +      H+   E ++AK L ++T P L+G     L    A+    GV K+  L S++ +  PIY E+  EL  A A  +  DEP LVMD++S
Sbjct:  122 PELGPEVNFSYASHKAVLEYKEAKALGVDTVPVLVGPVSYLLLSKQAK----GVDKSFDLLSLLPKILPIYKEVVAELKEAGASWIQFDEPLLVMDLES 216          

HSP 3 Score: 20.7866 bits (42), Expect = 1.417e-31
Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 3
Query:   57 MASDIIGIPTRGP 95
            MAS I+G P  GP
Sbjct:    1 MASHIVGYPRMGP 13          
BLAST of EY703444 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.270e-30
Identity = 58/119 (48.74%), Postives = 66/119 (55.46%), Query Frame = 1
Query:   79 YPHVGPMRELNCALESCWDGNIIAYDLQTVYADLGLSLWKQMSHAGIKYITHDTFFYYQLMLYTLVMLCGEPSRYNGDRREKEYDVYLSMDTRNTDDGDIEMTKRLYANNHGTDPDSGP 435
            YP +GP REL  ALES WDG   A DLQ V ADL  S+WKQMS AG K+I  +TF +Y  +L T  ML   P RY     E   DVY SM   N     +EMTK    N H   P+ GP
Sbjct:    8 YPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPPRYGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYIVPELGP 126          

HSP 2 Score: 50.0618 bits (118), Expect = 9.270e-30
Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 3
Query:  420 P*LGTLMKDLVDHHRVATESQDAKVLVMETGPGLLG----LRIPDAE*T*HGVAKTLPLFSVISRTRPIYNEIYGELDAACAYRMHCDEPSLVMDVDSR 704
            P LG  +      H+   E ++AK L ++T P L+G    L +  A     GV K+  L S++ +  PIY E+  EL AA A  +  DEP LVMD++ +
Sbjct:  122 PELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKAA---KGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQ 217          

HSP 3 Score: 20.7866 bits (42), Expect = 9.270e-30
Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 3
Query:   57 MASDIIGIPTRGP 95
            MAS I+G P  GP
Sbjct:    1 MASHIVGYPRMGP 13          
BLAST of EY703444 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.563e-29
Identity = 56/119 (47.06%), Postives = 64/119 (53.78%), Query Frame = 1
Query:   79 YPHVGPMRELNCALESCWDGNIIAYDLQTVYADLGLSLWKQMSHAGIKYITHDTFFYYQLMLYTLVMLCGEPSRYNGDRREKEYDVYLSMDTRNTDDGDIEMTKRLYANNHGTDPDSGP 435
            YP +GP REL  ALES WDG   A DL+     LG+ L KQMS AGIKYI  +TF YY  +L T  ML   P RYN    E  +  Y SM   N     +EMTK    N H   P+ GP
Sbjct:    8 YPRMGPKRELKFALESFWDGKSSAEDLEKCQLILGIHL-KQMSDAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWTGGEIGFSTYFSMARGNASVPAMEMTKWFDTNYHFIVPELGP 125          

HSP 2 Score: 56.9954 bits (136), Expect = 1.563e-29
Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 3
Query:  420 P*LGTLMKDLVDHHRVATESQDAKVLVMETGPGLLG------LRIPDAE*T*HGVAKTLPLFSVISRTRPIYNEIYGELDAACAYRMHCDEPSLVMDVDS 701
            P LG  +K     H+   E ++AK L ++T P L+G      L  P       GV KT PL S++ +  PIY E+  EL AA A  +  DEP+LV+D++S
Sbjct:  121 PELGPDVKFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLILSKPAK-----GVEKTFPLLSLLDKILPIYKEVIAELKAAGASWIQFDEPTLVLDLES 215          

HSP 3 Score: 20.7866 bits (42), Expect = 1.563e-29
Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 3
Query:   57 MASDIIGIPTRGP 95
            MAS I+G P  GP
Sbjct:    1 MASHIVGYPRMGP 13          
BLAST of EY703444 vs. ExPASy Swiss-Prot
Match: METE_RHOSR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodococcus sp. (strain RHA1) GN=metE PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.802e-13
Identity = 40/118 (33.90%), Postives = 54/118 (45.76%), Query Frame = 1
Query:   82 PHVGPMRELNCALESCWDGNIIAYDLQTVYADLGLSLWKQMSHAGIKYITHDTFFYYQLMLYTLVMLCGEPSRYNGDRREKEYDVYLSMDTRNTDDGDIEMTKRLYANNHGTDPDSGP 435
            P +GP REL  A+ES W G + A  L  +  DL    W  +  AG+  +  +TF YY  +L T  ML   P R  G   E + D Y +    N     +EMT+    N H   P+  P
Sbjct:   13 PRIGPNRELKKAVESYWAGRLDAEGLDALARDLRRRTWTSLRDAGLDSVPVNTFSYYDHVLDTAAMLGALPDRVAG--IESDLDRYFAAARGNDTVAPLEMTRWFDTNYHYLVPEISP 128          

HSP 2 Score: 31.5722 bits (70), Expect = 3.802e-13
Identity = 24/85 (28.24%), Postives = 39/85 (45.88%), Query Frame = 3
Query:  450 VDHHRVATESQDAKVLVMETGPGLLG----LRIPDAE*T*HGVAKTLPLFSVISRTRPIYNEIYGELDAACAYRMHCDEPSLVMD 692
            +D  +V  E ++A+ L +   P ++G    L +  A      V    PL   +    P+Y ++ G L  A A  +  DEP+LV D
Sbjct:  134 LDPSKVLRELEEARALDIPARPVVVGPVTFLLLSKA------VGSDAPLLDRLDELVPLYADLLGRLAGAGADWVQIDEPALVAD 212          
BLAST of EY703444 vs. ExPASy Swiss-Prot
Match: METE_STRCO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces coelicolor GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12
Identity = 41/119 (34.45%), Postives = 60/119 (50.42%), Query Frame = 1
Query:   79 YPHVGPMRELNCALESCWDGNIIAYDLQTVYADLGLSLWKQMSHAGIKYITHDTFFYYQLMLYTLVMLCGEPSRYNGDRREKEYDVYLSMDTRNTDDGDIEMTKRLYANNHGTDPDSGP 435
            YP  GP REL  A+E  W G + A +L+++ ADL  + W++++ AGI  +    F YY  +L T VM+   P R+         D Y +M     +   +EMTK    N H   P+ GP
Sbjct:   17 YPRQGPNRELKKAIEGYWKGRVSAPELRSLAADLRAANWRRLADAGIDEVPAGDFSYYDHVLDTTVMVGAIPERHRAAVAADALDGYFAMARGTQEVAPLEMTKWFDTNYHYLVPELGP 135          
BLAST of EY703444 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 41/119 (34.45%), Postives = 56/119 (47.06%), Query Frame = 1
Query:   79 YPHVGPMRELNCALESCWDGNIIAYDLQTVYADLGLSLWKQMSHAGIKYITHDTFFYYQLMLYTLVMLCGEPSRYNGDRREKEYDVYLSMDTRNTDDGDIEMTKRLYANNHGTDPDSGP 435
            YP  GP REL  A+E  W G + A  L+   A+L    W+Q++ AG+  +    F YY  +L T VM+   P R+         D Y +M     D   +EMTK    N H   P+ GP
Sbjct:   17 YPRQGPHRELKKAIEGYWKGRVDADALRETAAELRRGTWQQLAEAGVHEVPTGDFSYYDHVLDTSVMVGAVPERHRASVEADALDGYFAMARGTQDVAPLEMTKWFDTNYHYLVPELGP 135          
BLAST of EY703444 vs. ExPASy Swiss-Prot
Match: METE_STRAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces avermitilis GN=metE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 41/119 (34.45%), Postives = 55/119 (46.22%), Query Frame = 1
Query:   79 YPHVGPMRELNCALESCWDGNIIAYDLQTVYADLGLSLWKQMSHAGIKYITHDTFFYYQLMLYTLVMLCGEPSRYNGDRREKEYDVYLSMDTRNTDDGDIEMTKRLYANNHGTDPDSGP 435
            YP  G  REL  A+E  W G + A  L+T    L    W+Q++ AGI  +    F YY  +L T VM+   P+R+         D Y +M     D   +EMTK    N H   P+ GP
Sbjct:   17 YPRQGRGRELKKAIEGYWKGRLDADALRTTATGLRRDTWQQLAEAGIHEVPTGDFSYYDHVLDTSVMVGAIPARHRAAVEADALDGYFAMARGTQDVAPLEMTKWFDTNYHYLVPELGP 135          
The following BLAST results are available for this feature:
BLAST of EY703444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
METE_CATRO1.037e-3249.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR1.417e-3150.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ARATH9.270e-3048.745-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC1.563e-2947.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOSR3.802e-1333.905-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRCO1.292e-1234.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG2.204e-1234.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRAW7.090e-1134.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-019-F06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703444 ID=EY703444; Name=EY703444; organism=Citrus sinensis; type=EST; length=871bp
CTTTTATTTATACTCTTGACTCTCAATTCCTGTGCTATTCTTTGTCTGTT
AGCTAAATGGCATCTGACATAATTGGTATACCCACACGTGGGCCCCATGA
GGGAGCTCAACTGCGCGTTGGAATCCTGCTGGGATGGCAATATCATCGCT
TATGATTTGCAAACGGTGTACGCTGATCTCGGACTCTCTCTCTGGAAACA
GATGTCCCACGCCGGGATCAAGTACATTACACACGACACTTTTTTCTACT
ACCAGCTAATGCTCTACACCCTGGTGATGCTCTGTGGCGAGCCCTCGAGG
TATAACGGGGACAGGCGTGAGAAAGAATATGATGTTTACTTGTCCATGGA
CACAAGGAACACCGATGATGGCGATATCGAAATGACCAAGCGGCTCTACG
CCAACAATCATGGCACCGACCCTGACTCGGGACCCTGATGAAAGATCTTG
TCGATCACCACAGGGTTGCGACTGAGTCTCAAGACGCTAAAGTGCTTGTG
ATGGAAACTGGGCCAGGCTTATTGGGCCTGCGCATACCTGATGCTGAATA
AACCTGACATGGTGTTGCGAAGACCTTGCCTCTATTCTCTGTGATATCGA
GAACTCGCCCGATCTACAATGAAATATATGGTGAGCTTGATGCTGCTTGT
GCTTACCGAATGCACTGTGATGAACCATCGCTTGTGATGGATGTAGACTC
AAGAAATAGCATGCATTCAATGATGCTTAGTGCGAGCTAGAGTCATCTCT
GNATGCCTGGATGATCTCGGACATACTGACTTGCTGAAGTACCAGCTGAG
GCATTCCAAAACTGACTTCTTGGAAGATGGTCACGTTAACGTTTAGATCC
GAAAAGGCACCATGACCGGCA
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