FC922168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC922168 vs. ExPASy Swiss-Prot
Match: DME_ARATH (Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2) HSP 1 Score: 408.683 bits (1049), Expect = 2.018e-113 Identity = 201/277 (72.56%), Postives = 228/277 (82.31%), Query Frame = 2 Query: 2 ALPGPEEKSIVSSTMPTMAERNPSVVINPMPLPSPEKSSLAE---VRREIGKCEPIIEEPATPEQECTEITESDIEDAFY-EDPDEIPTIKLNIEEFTVNLQSYMQEKMELQECDMSKALVALNPDAASIPAPKLKNVSRLRTEHQVYELPDSHPLLEGMDRREPDDPSPYLLAIWTPGETANSIQLPESRCRSKESGKLCDEKTCFSCNSMRETNSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPIDVPREWLWNLPRRMVYFG 820 ALP PEE+S+ S+T+P E P V I + LP P + SLA RE CEPIIEEPA+P QECTEITESDIEDA+Y EDPDEIPTIKLNIE+F + L+ +M+ MELQE DMSKALVAL+P SIP PKLKN+SRLRTEHQVYELPDSH LL+GMD+REPDDPSPYLLAIWTPGETANS Q PE +C K SGK+C ++TC CNS+RE NSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNE+FADH+SSL PIDVPR+W+W+LPRR VYFG Sbjct: 1658 ALPAPEERSLTSATIPVPPESYPPVAIPMIELPLPLEKSLASGAPSNRE--NCEPIIEEPASPGQECTEITESDIEDAYYNEDPDEIPTIKLNIEQFGMTLREHMERNMELQEGDMSKALVALHPTTTSIPTPKLKNISRLRTEHQVYELPDSHRLLDGMDKREPDDPSPYLLAIWTPGETANSAQPPEQKCGGKASGKMCFDETCSECNSLREANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNELFADHESSLKPIDVPRDWIWDLPRRTVYFG 1932
BLAST of FC922168 vs. ExPASy Swiss-Prot
Match: ROS1_ARATH (Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=2) HSP 1 Score: 339.732 bits (870), Expect = 1.151e-92 Identity = 164/255 (64.31%), Postives = 200/255 (78.43%), Query Frame = 2 Query: 83 NPMPLPSPEKSSL---------AEVRREIGKCEPIIEEPATPEQECTEITESDIEDAFYEDPDEIPTIKLNIEEFTVNLQSYMQEKMELQECDMSKALVALNPDAASIPAPKLKNVSRLRTEHQVYELPDSHPLLEGMDRREPDDPSPYLLAIWTPGETANSIQLPESRCRSKESGKLCDEKTCFSCNSMRETNSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPIDVPREWLWNLPRRMVYFG 820 NP+PL PE +E +++ CEPIIEEPA+PE E E++ +DIE+AF+EDP+EIPTI+LN++ FT NL+ M+ ELQ+ +MS ALVAL + AS+P PKLKN+S+LRTEH+VYELPD HPLL +++REPDDP YLLAIWTPGETA+SIQ S C + +G LCDE+TCFSCNS++ET SQ VRGT+LIPCRTAMRGSFPLNGTYFQVNEVFADH SSLNPI+VPRE +W LPRR VYFG Sbjct: 1081 NPLPLHLPEPFQREQGSEVVQHSEPAKKVTCCEPIIEEPASPEPETAEVSIADIEEAFFEDPEEIPTIRLNMDAFTSNLKKIMEHNKELQDGNMSSALVALTAETASLPMPKLKNISQLRTEHRVYELPDEHPLLAQLEKREPDDPCSYLLAIWTPGETADSIQPSVSTCIFQANGMLCDEETCFSCNSIKETRSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHASSLNPINVPRELIWELPRRTVYFG 1335
BLAST of FC922168 vs. ExPASy Swiss-Prot
Match: DML2_ARATH (DEMETER-like protein 2 OS=Arabidopsis thaliana GN=DML2 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.977e-68 Identity = 151/286 (52.80%), Postives = 175/286 (61.19%), Query Frame = 2 Query: 2 ALPGPEEKSIVSSTMPTMAERNPSVVINPMPLPSPEKSSLAEVRREIGKCEPIIEEPATPEQECTEITESDIED--------AFYEDP----DEIPTIKLNIEEFTVNLQSYMQEKMELQECDMSKALVALNPDAASIPAPKLKNVSRLRTEHQVYELPDSHPLLEGMDRREPDDPSPYLLAIWTPGETANSIQLPESRCRSKESGK-LCDEKTCFSCNSMRETNSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPIDVPREWLWNLPRRMVYFG 820 ALP PEE S + + VV+N P + E +R CEPIIEEPA+PE E E DIED EDP D IPTI LN E T + + + +E S LV L+ AA+IP KLK +LRTEH V+ELPD H +LEG +RRE +D PYLLAIWTPGET NSIQ P+ RC ES LC+E CF CN RE SQTVRGT+LIPCRTAMRG FPLNGTYFQ NEVFADHDSS+NPIDVP E +W+L RR+ Y G Sbjct: 976 ALPEPEESDRTSVMIHERRSKRKPVVVNFRPSLFLYQEKEQEAQRS-QNCEPIIEEPASPEPE---YIEHDIEDYPRDKNNVGTSEDPWENKDVIPTIILNKEAGTSH------DLVVNKEAGTSHDLVVLSTYAAAIPRRKLKIKEKLRTEHHVFELPDHHSILEGFERREAEDIVPYLLAIWTPGETVNSIQPPKQRCALFESNNTLCNENKCFQCNKTREEESQTVRGTILIPCRTAMRGGFPLNGTYFQTNEVFADHDSSINPIDVPTELIWDLKRRVAYLG 1251
BLAST of FC922168 vs. ExPASy Swiss-Prot
Match: DML3_ARATH (DEMETER-like protein 3 OS=Arabidopsis thaliana GN=DML3 PE=2 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 7.549e-52 Identity = 111/232 (47.84%), Postives = 148/232 (63.79%), Query Frame = 2 Query: 152 EPIIEEPATPEQECTEITESDIEDA----FYEDPDEIPTIKLNIEEFTVNLQSYM--QEKMELQECDMSKALVALNPDAASIPAP---KLKNVSRLRTEHQVYELPDSHPLLEGMDRREPDDPSPYLLAIWTPGETANSIQLPESRCRSKESGKLCDEKTCFSCNSMRETNSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPIDVPREWLWNLPRRMVYFG 820 +P++E P++P E E T DIED Y+ +P I +++ +++ + +M + ++SKALV P+ A IP K+K +RLRTEH VY LPD+H LL +RR+ DDPSPYLLAIW PGET++S P+ +C S + KLC K C C ++RE NS RGT+LIPCRTAMRG+FPLNGTYFQ NEVFADH++SLNPI RE L +R +Y G Sbjct: 756 KPLVEFPSSPRAEIPEST--DIEDVPFMNLYQSYASVPKIDFDLDALKKSVEDALVISGRMSSSDEEISKALVIPTPENACIPIKPPRKMKYYNRLRTEHVVYVLPDNHELLHDFERRKLDDPSPYLLAIWQPGETSSSFVPPKKKC-SSDGSKLCKIKNCSYCWTIREQNSNIFRGTILIPCRTAMRGAFPLNGTYFQTNEVFADHETSLNPIVFRRELCKGLEKRALYCG 984 The following BLAST results are available for this feature:
BLAST of FC922168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC922168 ID=FC922168; Name=FC922168; organism=Citrus sinensis; type=EST; length=821bpback to top |