EY673036

Overview
NameEY673036
Unique NameEY673036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY673036 vs. ExPASy Swiss-Prot
Match: YZR3_ARATH (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.019e-63
Identity = 128/243 (52.67%), Postives = 146/243 (60.08%), Query Frame = 3 
Query:   81 QNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNSKPAAKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYGSRLSAGSPYRPLHXXXXXXXXXXXXXXXXXXXXXPPPLMDRY---XXXXXXXXXXXXXXXXXXXDDKSQRKGADATRG**LDMPKMWKYHFSFRTGCNMKKWNYPKAGXXXXXXXXXXXNKNAP-GYWK 797
            +NSSAAKRARTDG RREDDW CPSCGNVNFSFR TCNMRNCTQPRPADHN K A KP+Q  Q +SS   Y+GSG P  +Y+G  PYGS LFNGSS+PPYDVPFSGGS YH+NY SR+ AG+ YRPLH                     PPP+ DRY                      D+KSQ++  D+TR      P     +FSFRT CNM+K N PK G            +NAP G WK
Sbjct:    7 RNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSAPKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYNSRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPI-DRYGLGMAMGPGSAAAMMPRPRFYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQNAPEGSWK 246
The following BLAST results are available for this feature:
BLAST of EY673036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YZR3_ARATH1.019e-6352.67RanBP2-type zinc finger protein At1g67325 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-089-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY673036 ID=EY673036; Name=EY673036; organism=Citrus sinensis; type=EST; length=915bp
CTCTTTTCGAACCCAAGACATTAAGCTCTCGCATCGCCNGTTTCTCCNGT
TGCTTGTAGCCGCTATGTCACAGGTTGATACAGAACTCTTCTGCTGCCAA
GCGTGCTAGAACTGATGGTAGTCGGAGGGAAGATGATTGGACCTGTCCAA
GCTGTGGCAATGTCAACTTTTCATTCAGGATGACTTGCAATATGCGTAAT
TGCACTCAACCCAGACCAGCGGATCATAATTCCAAACCTGCAGCAAAGCC
CTTGCAAGCCCCACAGAATTACTCATCATCTGCTCCTTATGTTGGTTCTG
GTGCACCCTCTTCTATGTACCTGGGCATGCCGCCGTATGGTTCTTCCCTC
TTCAATGGGTCATCTATTCCTCCATACGATGTTCCATTTTCTGGGGGATC
AGCCTATCATTACAACTATGGAAGTCGTCTTTCTGCTGGAAGCCCTTACC
GACCGCTACATATGTCTGGACCACCTCCTTATTCTGGTGGTTCTATGATG
GGAAATGGTGGAATTTATGGCATGCCACCTCCCTTGATGGACCGATATGG
CTTAGGTCTGCCAATGGGCCCTGCTGCTATGGGTCCAAGACCTGGATTTT
TCCCAGATGACAAATCTCAGAGAAAGGGTGCAGATGCCACACGTGGATAA
TGATTGGACATGCCCAAAATGTGGAAATATCACTTTTCTTTTAGGACTGG
TTGTAACATGAAGAAATGGAATTACCCAAAAGCCGGGATTCCCAGGCGGC
GAATTTTGAAAAAAATCAAAAACAAAAATGCCCCAGGGTACTGGAAGGGG
GGAAAATGGTAACCACATAAATTACCCATTTTAGAACCATTGGCAACAAA
AAAAATTGGGGGAGTTGAAAACCCTGTTGGAACCCAAAAAGTTCCTCCTC
CCCCACCTAAAGAAA
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