EY703414

Overview
NameEY703414
Unique NameEY703414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703414 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.301e-15
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 1
Query:  283 RLSSSKEGFIHFYLGDLLRATAELVGKGIVGTSHKALLDNGTTVHLKMLT*VAVSKR*YIMRMERPGKIKRDHVQALMAHHYPKHEK*LVYDHM 564
            +L  ++ G   F L DLLRA+AE++GKG VGTS+KA+L+ GTTV +K L  V  SK+ +  +ME  GKIK  +V  L A++Y K EK LV+D M
Sbjct:  333 KLVFTEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVMASKKEFETQMEVVGKIKHPNVIPLRAYYYSKDEKLLVFDFM 426          

HSP 2 Score: 20.7866 bits (42), Expect = 3.301e-15
Identity = 13/31 (41.94%), Postives = 16/31 (51.61%), Query Frame = 2
Query:  575 SLSTLLHGSASSCH*WPFVSTSFLIWRSRLR 667
            SLS LLHGS  S         + L W +R+R
Sbjct:  430 SLSALLHGSRGS-------GRTPLDWDNRMR 453          
BLAST of EY703414 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.697e-13
Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 1
Query:  274 IGTRLSSSKEGFIHFYLGDLLRATAELVGKGIVGTSHKALLDNGTTVHLKMLT*VAVSKR*YIMRMERPGKIKRDHVQALMAHHYPKHEK*LVYDH 561
            +  RLS  +     F L DLLRA+AE++GKG  GT++KA+L++ T+V +K L  VA  KR +  +ME  G IK ++V  L A++Y K EK +VYD+
Sbjct:  316 VNNRLSFFEGCNYSFDLEDLLRASAEVLGKGTFGTTYKAVLEDATSVAVKRLKDVAAGKRDFEQQMEIIGGIKHENVVELKAYYYSKDEKLMVYDY 411          
BLAST of EY703414 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.339e-12
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 1
Query:  313 HFYLGDLLRATAELVGKGIVGTSHKALLDNGTTVHLKMLT*VAVSKR*YIMRMERPGKIK-RDHVQALMAHHYPKHEK*LVYDH 561
            +F L DLLRA+AE++GKG  GT++KA+L+ GTTV +K L  VA  KR +  +ME  G+I    +V  L A+++ K EK LVYD+
Sbjct:  333 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVAAGKREFEQQMEAVGRISPHVNVAPLRAYYFSKDEKLLVYDY 416          
The following BLAST results are available for this feature:
BLAST of EY703414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y2267_ARATH3.301e-1550.00Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y4374_ARATH3.697e-1344.79Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y3868_ARATH5.339e-1248.81Probable inactive receptor kinase At3g08680 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-019-C08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703414 ID=EY703414; Name=EY703414; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGCGACAATACCACCACCAGCAGCTCCATGCCATAAAAAT
CCAATAAACTCTCAACAGCCGCCATTGTCAGCATTGCGGCTGGAGGCGCA
TTCTTTATTGAGCGTATTACTGTGATTACTGGTATTTTGTCTTAAAAAAC
CACCACGACATCGGCCAGAGAAGGCCCCTAAACCCCCTGCGGCAGCAACG
GCGCGGGCTGTGACCATAGAGGCGGGGACTTCCTCATCCAACGATGATCT
CACTGGCGGCGCAGCCGAGGCTGATAGGAACACGCTTGTCATCCTCTAAA
GAGGGGTTTATACACTTCTATTTGGGGGATTTGCTGAGGGCTACAGCCGA
GCTGGTGGGTAAAGGAATCGTTGGGACGAGTCACAAAGCCCTGCTAGACA
ATGGAACCACTGTTCATCTGAAGATGCTTACTTAAGTGGCCGTTAGCAAA
CGATAGTACATCATGCGAATGGAACGTCCTGGCAAGATTAAGCGCGATCA
TGTACAGGCTTTGATGGCTCACCACTATCCGAAACATGAAAAGTAGCTTG
TTTATGATCACATGCTCTGCCGCCAGCTTATCCACTCTACTTCACGGTAG
TGCCTCCTCATGCCACTAATGGCCTTTCGTATCCACAAGCTTCCTGATCT
GGCGCTCACGATTGCGGTGATGCGCATTGTATCATTTTTCTACAAATGTG
CTGACCTCACTAGACAGTGCTGCATCATCGTCGACGACTTCTATTTTCAC
GTGCCTACACCATAATGGCTTACGGCCTGTCCTGGCTCCTTGTAAATATA
AACAAGAGCACCTTCCTAGATGACTACTATTAATTCGCGATTAACGGTGG
CTTGATCTAATTGTAACGGATTTTTCGGTTGGGCATGTTTGGGTTACGGG
GGGAAATTTTGGACTTTAACTGC
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