EY673008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: GGPPS_CATRO (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.184e-64 Identity = 124/182 (68.13%), Postives = 146/182 (80.22%), Query Frame = 3 Query: 3 DALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQVIDINSEGQKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 548 DALLA+AFEHIA TKGVS RIVR + ELAK IG++GLVAGQV+D+ SEG D+G+EHLEFIH HKT D ++ KLR FARCIGLLFQVVDDILD+TKSS+ELGKTAGKDLVADK+TYPKLLGI++S++ A+KLN++AQ+QL+EFD EKA PLIALANYIAYR N Sbjct: 176 DALLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 357
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.877e-64 Identity = 128/182 (70.33%), Postives = 147/182 (80.77%), Query Frame = 3 Query: 3 DALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQVIDINSEGQKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 548 DALLA+AFEHIAV T VS ARIVRA+ ELAK IGA+GLVAGQV+DINSEG ++ +E LEFIH HKT TD EVEKLR +AR IGLLFQVVDDILD+TKSS+ELGKTAGKDLVADK+TYPKLLGIE+S++ A+KLNK+AQ+QL+ FD EKA PLIALANYIA+RQN Sbjct: 189 DALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAHRQN 370
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: GGPP1_ARATH (Geranylgeranyl pyrophosphate synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=GGPS1 PE=2 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 1.355e-60 Identity = 118/186 (63.44%), Postives = 146/186 (78.49%), Query Frame = 3 Query: 3 DALLAYAFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQVIDINSEGQ--KDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 548 DALL++AFEH+A T VSP R+VRA+ ELAK IG +GLVAGQV+DI+SEG D+G+EHLEFIH HKT +D+E+E+LR FARCIGLLFQVVDDILD+TKSSKELGKTAGKDL+ADKLTYPK++G+E+S++ A+KLN++A+ QL FD +K PL+ALANYIAYRQN Sbjct: 186 DALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthetase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.163e-58 Identity = 116/185 (62.70%), Postives = 144/185 (77.84%), Query Frame = 3 Query: 3 DALLAYAFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQVIDINSEGQ--KDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 548 DALL++AFEH+A T VSPAR+VRA+ ELAK IG +GLVAGQV+DI+SEG ++G+EHL+FIH HKT +D E+E+LR FARCIGLLFQVVDDILD+TKSS+ELGKTAGKDL+ADKLTYPKL+G+E+S++ A+KLN +A+ QL FD +K PL+ALANYIA RQN Sbjct: 182 DALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 366
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.123e-57 Identity = 116/182 (63.74%), Postives = 136/182 (74.73%), Query Frame = 3 Query: 3 DALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQVIDINSEGQKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 548 D+LLA+AFEHI T GV+P+RIV A+AELAK IG +GLVAGQV DI G + +E LEFIH HKT T+ EVEKLR FARCIGLLFQVVDDILD+TKSS+ELGKTAGKDLV DK TYPKLLG+E++K+ A +LN++A+QQL FD KA PLIALA+YIAYR N Sbjct: 188 DSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYIAYRDN 369
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: GGPP3_ARATH (Geranylgeranyl pyrophosphate synthetase 3, chloroplastic OS=Arabidopsis thaliana GN=GGPP3 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.358e-52 Identity = 107/185 (57.84%), Postives = 138/185 (74.59%), Query Frame = 3 Query: 3 DALLAYAFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQVIDINSE--GQKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 548 DALLA AFEH+ V + G V+P R++RA+ ELA+ IG GLVAGQ+ID+ SE +G+EHLEFIH HKT T+ E+EKLR +ARCIGLLFQVVDDILD+TKS++ELGKTAGKD++A KLTYP+L+G+E SK++A+KL ++A++QL FD KA PL+ALA+YIA R N Sbjct: 176 DALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: GGPP4_ARATH (Geranylgeranyl pyrophosphate synthetase 4 OS=Arabidopsis thaliana GN=GGPP4 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 9.108e-49 Identity = 104/183 (56.83%), Postives = 129/183 (70.49%), Query Frame = 3 Query: 6 ALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQVIDINSEG--QKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 548 ALLA AFEH+ VS ++VRA+ ELAK IG GLVAGQ D++SEG Q D+G+E LE+IH HKT T+ E+EK+R FARCIGLLFQVVDDILD TKSS+ELGKTAGKD VA KLTYPK++G+E+SK+ +KL +DA++ L FD +K PLIAL N+IA R + Sbjct: 192 ALLALAFEHLTEAD--VSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: GGPP2_ARATH (Geranylgeranyl pyrophosphate synthetase 2 OS=Arabidopsis thaliana GN=GGPP2 PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 1.113e-46 Identity = 101/181 (55.80%), Postives = 125/181 (69.06%), Query Frame = 3 Query: 6 ALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQVIDINSEGQ--KDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 542 ALL+ AFEH+ T +S R+V A+ ELA+ IG GLVAGQ +DI+SEG ++G+EHLEFIH HKT +D E+E +R FARCIGLLFQVVDDILD TKSS+ELGKTAGKD +A KLTYPKL+G+E+SK+ +L KDA+Q L F EK PL+AL +IA R Sbjct: 196 ALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANR 374
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: GGPP6_ARATH (Geranylgeranyl pyrophosphate synthetase 6, mitochondrial OS=Arabidopsis thaliana GN=GGPP6 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 6.990e-41 Identity = 80/176 (45.45%), Postives = 122/176 (69.32%), Query Frame = 3 Query: 33 IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQVIDINSEGQ----KDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 548 +A + GV+ R++RA+ E+A+ +G +GLVAGQ D+ E +D + +LE +H HKT +D E+E+L+++ARC+GL+FQV+DD+LD TKSS+ELGKTAGKDL+ KLTYPK++G++ +++ A +LN++AQ+ L FD +K VPL++LA+YI RQN Sbjct: 161 LASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQN 336
BLAST of EY673008 vs. ExPASy Swiss-Prot
Match: CRTE_CYAPA (Geranylgeranyl pyrophosphate synthetase homolog OS=Cyanophora paradoxa GN=crtE PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.508e-35 Identity = 79/182 (43.41%), Postives = 114/182 (62.64%), Query Frame = 3 Query: 3 DALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQVIDINSEGQKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 548 DALLAYAFE IA TK V IV+ IA++A + GLV GQ+ID++SEG+ D +E L FIH HKT + ++ + +A+ IGL FQ++DD+LD+ + ++LGK+ GKDL K TYP G+EES K A+ L ++A++++ FD KA+PLIA+A++I R N Sbjct: 120 DALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFWGVEESIKQAELLVEEAKEEILYFD-NKAIPLIAIADFIVNRNN 300 The following BLAST results are available for this feature:
BLAST of EY673008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY673008 ID=EY673008; Name=EY673008; organism=Citrus sinensis; type=EST; length=906bpback to top |