EY703408

Overview
NameEY703408
Unique NameEY703408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.874e-85
Identity = 156/183 (85.25%), Postives = 172/183 (93.99%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINVKDDSSVLKRIGCCS 585
            KNEFNLESKSTIGVEFAT++L +D KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF N  RWL+ELR+HTDPNI+VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVLTQIY+IVSKRAVEAG +G++S L SKG+TINVK+DSSVLKR GCCS
Sbjct:   35 KNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217          
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 7.368e-82
Identity = 150/184 (81.52%), Postives = 166/184 (90.22%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINVKDDSSVLKRIGCCSN 588
            +NEFNLESKSTIGVEFAT+SL ID KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TF   GRWL+ELR+HTDPNI+VMLIGNK+DLRHLV VSTEDGKAFAE+ESLYFMETSAL+ATNVENAF+EVLTQIY+IVSKRAVEAG   + S + S+G+TINV +DSSVL R  CCSN
Sbjct:   35 RNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218          
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 7.368e-82
Identity = 151/184 (82.07%), Postives = 167/184 (90.76%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINVKDDSSVLKRIGCCSN 588
            KNEFNLESKSTIGVEFAT++ +++ KVVKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATF N  RWLRELR HTDPNI+VMLIGNK DLRHLVAV TE+ KAFAE+ESLYFMETSALDATNVENAFTEVLTQI+KIVSKR+V+ G  G ++ L  KGETINVK+D SVLKR+GCCSN
Sbjct:   35 KNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216          
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.776e-81
Identity = 146/184 (79.35%), Postives = 164/184 (89.13%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINVKDDSSVLKRIGCCSN 588
            KNEFNLESKSTIGVEFAT+SL IDNKV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ NV RWL+ELR+HTDPNI+VMLIGNK+DLRHLVAVST++ K  AE+E LYFMETSAL+ATNVENAFTE LTQIY+IVSK+AVEAG  G  S+   KGETIN+KD+ S  K+ GCCS+
Sbjct:   35 KNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218          
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2)

HSP 1 Score: 293.893 bits (751), Expect = 7.625e-79
Identity = 145/183 (79.23%), Postives = 167/183 (91.26%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINVKDDSSVLKRIGCCS 585
            +NEF+LESKSTIGVEFATRSL++D KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF NV RWL+ELR+HTDPNI+VML+GNK+DLRHLVAV T++GKAFAE+ESLYFMETSAL++TNVENAF EVLTQIY+IVSKR+VEAG +  A +   KGE IN+KDD S +K+ GCCS
Sbjct:   36 RNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDD--AGSGPGKGEKINIKDDVSAVKKGGCCS 216          
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.218e-78
Identity = 145/184 (78.80%), Postives = 164/184 (89.13%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINVKDDSSVLKRIGCCSN 588
            KNEFNLESKSTIGVEFATR+L++D KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF NV RWL+EL+ HTDPNI+VML+GNK+DLRHL+AV TEDGK++AEQESL FMETSAL+ATNVE+AF EVLTQIY+I SK+ VEAG +G AS    KGE I VK+D S LK++GCCSN
Sbjct:   35 KNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASV--PKGEKIEVKNDVSALKKLGCCSN 216          
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.758e-75
Identity = 140/184 (76.09%), Postives = 163/184 (88.59%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINVKDDSSVLKRIGCCSN 588
            KNEF+LESKSTIGVEFATRSL +D+KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF NV  WL+ELR HTDPNI+VML+GNK+DLRHLVAV TED K+FAE+ESLYFMETSAL+ATNVENAF EVLTQI+ IVSK+A+EA S   ++ + SKG+ I++  D S +K+ GCCSN
Sbjct:   35 KNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASE--SANVPSKGDKIDIGKDVSAVKKGGCCSN 216          
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.315e-74
Identity = 135/185 (72.97%), Postives = 163/185 (88.11%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINV-KDDSSVLKRIGCCSN 588
            +NEFNLESKSTIGVEFATRS+R+D+K+VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRH TF NV RWL+ELR+HTD NI++ML+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVLT+IYK+V ++A+E G +  A     KG+TINV KDD S +K++GCCS+
Sbjct:   36 RNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAA---LPKGQTINVGKDDVSAVKKVGCCSS 217          
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.307e-62
Identity = 119/183 (65.03%), Postives = 146/183 (79.78%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINVKDDSSVLKRIGCCS 585
            +NEF LESKSTIGVEFATR+L+++ K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TF NV RWLRELR+H D NI++M+ GNK+DL HL AVS +DG A +E+E L F+ETSAL+ATN+E AF  +LT+IY IVSK+A+ A      +++  +G TINV D S   K+ GCCS
Sbjct:   34 RNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVADTSGNTKK-GCCS 215          
BLAST of EY703408 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.802e-62
Identity = 114/169 (67.46%), Postives = 145/169 (85.80%), Query Frame = 1
Query:   37 KNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFXNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLXSKGETINV 543
            +NEFN+ESKSTIGVEFATR++ +DNK +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ ++F NVGRWL+ELREH D NI++ML+GNKTDL HL AVSTE+ +AFA + +L F+ETSA+DA+NVE AF  VLT+I++IVS R++EAG +G   T    G+T+N+
Sbjct:   32 RNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGVHPT---AGQTLNI 197          
The following BLAST results are available for this feature:
BLAST of EY703408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 498
Match NameE-valueIdentityDescription
RB11D_LOTJA1.874e-8585.25Ras-related protein Rab11D OS=Lotus japonicus GN=R... [more]
RB11E_LOTJA7.368e-8281.52Ras-related protein Rab11E OS=Lotus japonicus GN=R... [more]
RAA1A_ARATH7.368e-8282.07Ras-related protein RABA1a OS=Arabidopsis thaliana... [more]
YPT3_NICPL4.776e-8179.35Ras-related protein YPT3 OS=Nicotiana plumbaginifo... [more]
RIC2_ORYSJ7.625e-7979.23Ras-related protein RIC2 OS=Oryza sativa subsp. ja... [more]
RAA1B_ARATH2.218e-7878.80Ras-related protein RABA1b OS=Arabidopsis thaliana... [more]
RAA1C_ARATH1.758e-7576.09Ras-related protein RABA1c OS=Arabidopsis thaliana... [more]
RB11B_TOBAC3.315e-7472.97Ras-related protein Rab11B OS=Nicotiana tabacum GN... [more]
RB11C_LOTJA1.307e-6265.03Ras-related protein Rab11C OS=Lotus japonicus GN=R... [more]
YPT3_SCHPO3.802e-6267.46GTP-binding protein ypt3 OS=Schizosaccharomyces po... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-019-C02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703408 ID=EY703408; Name=EY703408; organism=Citrus sinensis; type=EST; length=851bp
CCACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGCAAAAACGAGTTTAA
TTTGGAATCAAAGTCTACTATTGGTGTTGAGTTCGCTACCAGGAGTTTGA
GGATTGATAACAAGGTTGTCAAGGCTCAAATTTGGGACACTGCTGGCCAA
GAAAGGTACCGTGCAATTACAAGTGCTTACTACCGGGGTGCCGTTGGTGC
TTTGCTTGTATACGATGTAACACGACATGCTACATTTCANAATGTTGGAA
GGTGGTTGAGGGAGTTAAGAGAGCACACAGATCCGAACATTATTGTCATG
CTCATTGGCAATAAGACAGATCTTCGACACCTTGTGGCTGTCTCAACTGA
GGATGGGAAAGCTTTTGCTGAGCAGGAGTCTCTCTATTTCATGGAGACTT
CCGCATTGGATGCAACCAATGTGGAAAATGCTTTTACTGAGGTTCTTACT
CAGATATACAAGATCGTGAGCAAGAGAGCAGTTGAAGCAGGCAGCAATGG
AACTGCTTCCACACTTNCATCTAAAGGAGAGACGATAAATGTCAAAGACG
ATTCATCCGTTCTAAAGAGAATTGGATGCTGCTCAAACTANGGAGATATA
TTCGGTTACCAGATTTTACAGCATTGGGCATTTTACTTGTACATGATCAA
AGTAATCTTTGTGTAAAATGAAAACTACCGTCTGGNTAACTGTTTTGAAT
TTTTCTAAAAGCCTCTCTCAAAGACTCTAAATTGTCTGGTATAAACCAAC
ATTTGGGTATTCCATTTGATTACCTGAAACTATGTTTTGATTNCTCATCC
TGACAGATATGGCCTGTAAAAAAAAAAAAGAAGGCCGCCGTCTAAAGATC
C
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