EY720472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLMI_AERS4 (Ribosomal RNA large subunit methyltransferase I OS=Aeromonas salmonicida (strain A449) GN=rlmI PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.354e-12 Identity = 40/120 (33.33%), Postives = 69/120 (57.50%), Query Frame = -2 Query: 17 FLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGQLNP-QLPTMEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQRQYDLVLLDPPAWAKS 373 +LD R+ R V +++ K VLN F+YT G G+ A GGA+EV N+D ++ L + R+N +LN + +F++ D F +R+ + +G+K +D+++LDPP +A+S Sbjct: 205 YLDQRDNRQAVSKYTSAKRVLNCFSYTGGFGIYALKGGAKEVVNVDLSQTALDMARQNAELNGLDISNTQFIRHDVFKLLREY------REKGEK-----------FDVIVLDPPKFAES 307
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLMI_AERHH (Ribosomal RNA large subunit methyltransferase I OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rlmI PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.016e-12 Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = -2 Query: 17 FLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGQLNP-QLPTMEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQRQYDLVLLDPPAWAKS 373 +LD R+ R ++ GK VLN F YT G G+ A GGA+EV N+D ++ L + R+N +LN +FV+ D F +R+ + +G K +D+++LDPP +A+S Sbjct: 206 YLDQRDNRQAAAKYTEGKRVLNCFCYTGGFGVYALKGGAKEVVNVDLSQNALDIARQNAELNGLDTSNTQFVRHDVFKLLREY------REKGDK-----------FDVIVLDPPKFAES 308
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLML_PSYCK (Ribosomal RNA large subunit methyltransferase L OS=Psychrobacter cryohalolentis (strain K5) GN=rlmL PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.720e-12 Identity = 42/126 (33.33%), Postives = 64/126 (50.79%), Query Frame = -2 Query: 17 DPLLFLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGREN---GQLNPQLPTMEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQRQYDLVLLDPPAWAKS 385 D LF+D RN R +K +S KSVLNLFAYTC + AA GA++V ++D ++ L G++N LN +FV +D F I+ + Q+D++ +DPP ++ S Sbjct: 590 DTGLFIDHRNMRARIKDNSRNKSVLNLFAYTCTASVHAALAGAKKVTSVDLSQNYLDWGKQNFALNGLNVSSNKYQFVAADIFEWIKD--------------------NTEQFDIIFIDPPTFSNS 695
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLML_PSYWF (Ribosomal RNA large subunit methyltransferase L OS=Psychrobacter sp. (strain PRwf-1) GN=rlmL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.776e-12 Identity = 42/126 (33.33%), Postives = 64/126 (50.79%), Query Frame = -2 Query: 17 DPLLFLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGQLNPQLPT---MEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQRQYDLVLLDPPAWAKS 385 D LF+D RN R +++ S G VLNLFAYTC + AA GGA+ V ++D ++ L G++N LN T +F+ SD F I+ + Q+D++ +DPP ++ S Sbjct: 623 DTGLFIDHRNMRSMIRSASRGADVLNLFAYTCTASVHAALGGAKSVTSVDLSQNYLDWGKQNFALNGLDVTTSRYQFIASDIFDWIKD--------------------NTDQFDVIFIDPPTFSNS 728
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLML_PSYA2 (Ribosomal RNA large subunit methyltransferase L OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=rlmL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.146e-11 Identity = 42/126 (33.33%), Postives = 64/126 (50.79%), Query Frame = -2 Query: 17 DPLLFLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGREN---GQLNPQLPTMEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQRQYDLVLLDPPAWAKS 385 D LF+D RN R +K +S KSVLNLFAYTC + AA GA++V ++D ++ L G++N LN +FV +D F I+ + Q+D++ +DPP ++ S Sbjct: 582 DTGLFIDHRNMRARIKDNSRNKSVLNLFAYTCTASVHAALAGAKKVTSVDLSQNYLDWGKQNFALNGLNVSGNKYQFVAADIFEWIKD--------------------NTEQFDIIFIDPPTFSNS 687
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLML_HAHCH (Ribosomal RNA large subunit methyltransferase L OS=Hahella chejuensis (strain KCTC 2396) GN=rlmL PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.553e-11 Identity = 40/123 (32.52%), Postives = 58/123 (47.15%), Query Frame = -2 Query: 17 DPLLFLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGQLNPQLPTMEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQRQYDLVLLDPPAWAKS 385 D LFLD R TR W++ HS+GK LNLF YT + AAAGGA ++D ++ L+ N LN FV+++ + + + YDL+ LDPP ++ S Sbjct: 536 DSGLFLDHRPTRYWIQKHSSGKRFLNLFCYTGAASVHAAAGGAATTTSVDMSQTYLSWAERNFHLNKLSGPHRFVRANVL--------------------DWLKAEHNSYDLIFLDPPTFSNS 638
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLML_ALTMD (Ribosomal RNA large subunit methyltransferase L OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=rlmL PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.553e-11 Identity = 44/123 (35.77%), Postives = 62/123 (50.41%), Query Frame = -2 Query: 17 DPLLFLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGQLNPQLPTMEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQRQYDLVLLDPPAWAKS 385 D LFLD RNTR VKA S GK VLNLF+YT V + AA GGA+ V +D + L ++N LN F+Q+D ++ + +YDL+ +DPP+++ S Sbjct: 518 DTGLFLDHRNTRQKVKALSQGKDVLNLFSYTGSVSVFAAMGGAKSVTTVDMSNTYLDWAKKNVALNKLSGPHAFIQAD--------------------CTTWLGTHKGKYDLIFIDPPSFSNS 620
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLML_SHESR (Ribosomal RNA large subunit methyltransferase L OS=Shewanella sp. (strain MR-7) GN=rlmL PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.355e-11 Identity = 49/125 (39.20%), Postives = 62/125 (49.60%), Query Frame = -2 Query: 17 DPLLFLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGQLNP-QLPTMEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQ-RQYDLVLLDPPAWAKS 385 D LFLD R TR V S G+ VLNLF+YT + AA GGA+ V +D + LA +EN LN EFVQ+D IR A LD+ QYDL+ +DPP ++ S Sbjct: 526 DTGLFLDHRLTRRLVGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFALNDLSGKQYEFVQADCLQWIRDSA-----------------LDKSAQYDLIFIDPPTFSNS 633
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLML_SHESM (Ribosomal RNA large subunit methyltransferase L OS=Shewanella sp. (strain MR-4) GN=rlmL PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.355e-11 Identity = 49/125 (39.20%), Postives = 62/125 (49.60%), Query Frame = -2 Query: 17 DPLLFLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGQLNP-QLPTMEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQ-RQYDLVLLDPPAWAKS 385 D LFLD R TR V S G+ VLNLF+YT + AA GGA+ V +D + LA +EN LN EFVQ+D IR A LD+ QYDL+ +DPP ++ S Sbjct: 526 DTGLFLDHRLTRRLVGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFALNDLSGKQYEFVQADCLQWIRDSA-----------------LDKSAQYDLIFIDPPTFSNS 633
BLAST of EY720472 vs. ExPASy Swiss-Prot
Match: RLML_SHEB9 (Ribosomal RNA large subunit methyltransferase L OS=Shewanella baltica (strain OS195) GN=rlmL PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.429e-11 Identity = 46/124 (37.10%), Postives = 59/124 (47.58%), Query Frame = -2 Query: 17 DPLLFLDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGQLNP-QLPTMEFVQSDYFPAIRQLAGLPISQRRGQKLPSYPRLDQRQYDLVLLDPPAWAKS 385 D LFLD R TR V S G+ VLNLF+YT + AA GGA+ V +D + +A ++N LN Q EFVQSD IR QYDL+ +DPP ++ S Sbjct: 526 DTGLFLDHRLTRRLVGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYIAWAKDNFALNGLQGKQYEFVQSDCMQWIRDC--------------------NEQYDLIFIDPPTFSNS 629 The following BLAST results are available for this feature:
BLAST of EY720472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720472 ID=EY720472; Name=EY720472; organism=Citrus sinensis; type=EST; length=395bpback to top |