EY703259

Overview
NameEY703259
Unique NameEY703259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY703259_ssr217 microsatellite EY703259_ssr217:217..228. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3816 contig Csv1_Contig3816:132..842. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.841e-51
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 3
Query:   18 SGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCWS 434
            SGIRKILP S+ICDF+F+PCGYSMN++EG  +STIHVTPEDGFSYASFEA+GYDF+ V L  L++RVL+CF+PAEFSVALH D +G++    F LD+KGY+CGE+ YE LG  GS++Y  F+ T    SPRS L CCWS
Sbjct:  212 SGIRKILPGSDICDFDFEPCGYSMNAVEGGTISTIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFELDVKGYACGERSYEALGKGGSIMYCGFTSTGSCGSPRSTLLCCWS 350          
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.460e-50
Identity = 91/139 (65.47%), Postives = 111/139 (79.86%), Query Frame = 3
Query:   18 SGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCWS 434
            SGIRKILP SEICDF+F+PCGYSMN++EG A+S IHVTPEDGFSYASFEA+GYDF+ V L  L++RVL+CF+PAEFSVALH D +G++    F LD+KGY+CGE+ YE L   GS++Y  F+ T    SPRS L CCWS
Sbjct:  212 SGIRKILPGSEICDFDFEPCGYSMNAVEGGAISPIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFKLDVKGYACGERSYEGLNKGGSIMYCGFTSTGSCGSPRSTLLCCWS 350          
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.781e-48
Identity = 94/138 (68.12%), Postives = 104/138 (75.36%), Query Frame = 3
Query:   18 SGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 431
            SGIRKILP SEICDFEFDPCGYSMNSIE  A+STIHVTPEDGFSYASFEA GYD +   L  ++ERVLACF+P+EFSVA+H D+          L+LK YS  EKI EELG  GS+IY  F R D   SPRSILKCCW
Sbjct:  212 SGIRKILPDSEICDFEFDPCGYSMNSIEEAAISTIHVTPEDGFSYASFEAAGYDLKAQNLGMMIERVLACFQPSEFSVAVHCDVTCKSLEQICSLELKEYSLDEKINEELGLGGSIIYKKFLRIDACGSPRSILKCCW 349          
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.157e-47
Identity = 89/138 (64.49%), Postives = 108/138 (78.26%), Query Frame = 3
Query:   18 SGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 431
            SGIRKILP SEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD + ++L PL+ERVLACF+PAEFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F++T    SP+S+LK CW
Sbjct:  214 SGIRKILPNSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDLKTMELGPLVERVLACFEPAEFSIALHADVATKLLERVCCVDVKGYSLAEWSPEEFGKGGSIVYQKFTKTPYCASPKSVLKGCW 351          
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.511e-47
Identity = 90/138 (65.22%), Postives = 107/138 (77.54%), Query Frame = 3
Query:   18 SGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 431
            SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F+RT    SP+S+LK CW
Sbjct:  214 SGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351          
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.511e-47
Identity = 90/138 (65.22%), Postives = 107/138 (77.54%), Query Frame = 3
Query:   18 SGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 431
            SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F+RT    SP+S+LK CW
Sbjct:  214 SGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351          
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.365e-47
Identity = 90/138 (65.22%), Postives = 107/138 (77.54%), Query Frame = 3
Query:   18 SGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 431
            SGIRKILPK EICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD +  +L PL+ERVLACF+PAEFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F+RT    SP+S+LK CW
Sbjct:  212 SGIRKILPKFEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDPKTTELGPLVERVLACFEPAEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPYCESPKSVLKGCW 349          
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.395e-47
Identity = 90/138 (65.22%), Postives = 109/138 (78.99%), Query Frame = 3
Query:   18 SGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 431
            SGIRKILPKSEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGF+YASFE+VGY+ + ++L PL+ERVLACF+PAEFSVALH+D+          +D+KGYS  E   EE G  GS++Y  F+RT    SP+S+LK CW
Sbjct:  214 SGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADVATKLLERICSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCW 351          
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.721e-46
Identity = 94/145 (64.83%), Postives = 116/145 (80.00%), Query Frame = 3
Query:   12 EDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALH--SDIVGDEHGDTFMLDLKGYSCGEKIYEEL-GNNGSLIYYSFSRTDCST-SPRSILKCCWS 434
            EDSGIRKILP+S+ICDF+FDPCGYSMN+IEGDA+STIHVTPEDGFSYASFEAVGYDF+ + LT L+ERVLACF+P+EFSVALH   ++V D + +   +++KGY+  E  +E L G  GS++YY F+R   S  SPRS L  CWS
Sbjct:  210 EDSGIRKILPESQICDFDFDPCGYSMNAIEGDAISTIHVTPEDGFSYASFEAVGYDFKSMGLTVLIERVLACFEPSEFSVALHGNENVVKDLNLENNDVNVKGYNVEETKFEVLGGEGGSMVYYGFARGGSSCGSPRSTLHRCWS 354          
BLAST of EY703259 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.150e-45
Identity = 88/144 (61.11%), Postives = 112/144 (77.78%), Query Frame = 3
Query:   12 EDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRTD--CSTSPRSILKCCWS 434
            ++SGIRKILPKSEICDFEF+PCGYSMNSIEGDA+STIHVTPEDGFSYASFEAVGYDF  + L+ L+ RVL+CF+P +FSVA+HS +  + +     +DL+ Y C E+ +E LG  +G+++Y +F +    C  SPRS LKC WS
Sbjct:  209 DNSGIRKILPKSEICDFEFEPCGYSMNSIEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANSYKPEITVDLEDYGCRERTFESLGEESGTVMYQTFEKLGKYCG-SPRSTLKCEWS 351          
The following BLAST results are available for this feature:
BLAST of EY703259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
DCAM_IPONI3.841e-5165.47S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_IPOBA1.460e-5065.47S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_CATRO6.781e-4868.12S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_DATST1.157e-4764.49S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_TOBAC1.511e-4765.22S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_NICSY1.511e-4765.22S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_SOLCI3.365e-4765.22S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_SOLTU4.395e-4765.22S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_HELAN3.721e-4664.83S-adenosylmethionine decarboxylase proenzyme OS=He... [more]
DCAM1_ARATH3.150e-4561.11S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703259 ID=EY703259; Name=EY703259; organism=Citrus sinensis; type=EST; length=711bp
CCACGCGTCCGGAGGACTCTGGCATCAGAAAGATTCTTCCAAAATCTGAG
ATTTGTGATTTTGAGTTTGACCCTTGTGGTTACTCCATGAATAGTATTGA
AGGGGATGCAGTATCTACTATCCACGTCACACCTGAAGATGGTTTCAGTT
ATGCAAGTTTTGAGGCTGTGGGTTATGATTTTGAGGTTGTGAAGTTGACT
CCCTTGCTTGAGAGGGTGCTTGCTTGCTTCAAACCCGCTGAGTTTTCTGT
TGCTCTGCATTCTGACATTGTTGGCGATGAACATGGAGACACCTTCATGC
TGGACTTGAAGGGATATTCTTGTGGAGAAAAGATATATGAAGAGCTCGGT
AATAATGGTTCGCTGATCTACTACAGCTTTTCGAGGACTGATTGCTCCAC
ATCTCCTAGGTCAATCTTGAAATGCTGTTGGAGCGAGGACGAGAAGGACG
AGGAAGTTGAAGGGAAATAGTGTCCCGGATATAATATTGTGTTTGTTTTT
TTCATTTTAATCCTTCGCTTATATAATAAAATGTGGTGGGGTTATGTAAT
GGTANGGCTTGAGCAGCCTTTACCTTTCCGTTTTGCTGCATTTTTCCTGT
TATTGTGAACAAGGTCTTATGTTTTTGGATTTCCAGAGATGTAGATGTTA
AACCAGTATCTTCTTTTTATATAAGAGTCATATTATTATATCATAAAAAA
AAAAAAAAAAA
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