EY703225

Overview
NameEY703225
Unique NameEY703225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.058e-27
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            ETASID FSWGVANRGCSIRVGR+TEK+GKGYLEDRRPASNMDPY+VTSLLAETT+LWEPT
Sbjct:  353 ETASIDQFSWGVANRGCSIRVGRDTEKKGKGYLEDRRPASNMDPYIVTSLLAETTLLWEPT 413          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA2_DAUCA (Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.584e-27
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            ETASIDSFSWGVA+RGCSIRVGR+TEK+GKGYLEDRRPASNMDPYVVT LLAETT+LWEPT
Sbjct:  357 ETASIDSFSWGVADRGCSIRVGRDTEKEGKGYLEDRRPASNMDPYVVTGLLAETTLLWEPT 417          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA2_ORYSJ (Glutamine synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=GLN2 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.820e-27
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            ETASID+FSWGVANRGCSIRVGR+TE +GKGYLEDRRPASNMDPYVVT+LLAETTILWEPT
Sbjct:  353 ETASIDNFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYVVTALLAETTILWEPT 413          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.021e-26
Identity = 55/61 (90.16%), Postives = 59/61 (96.72%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            ETASID FSWGVANRGCSIRVGR+TE +GKGYLEDRRPASNMDPY+VTSLLAETT+LWEPT
Sbjct:  355 ETASIDQFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYIVTSLLAETTLLWEPT 415          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA4_PHAVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.742e-26
Identity = 55/61 (90.16%), Postives = 60/61 (98.36%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            ETASI++FSWGVANRGCSIRVGR+TEK GKGYLEDRRPASNMDPYVVTSLLAE+T+LWEPT
Sbjct:  354 ETASINTFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTSLLAESTLLWEPT 414          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.881e-26
Identity = 54/61 (88.52%), Postives = 60/61 (98.36%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            ETASI++FSWGVANRGCSIRVGR+TEK GKGYLEDRRPASNMDPYVVT+LLAE+T+LWEPT
Sbjct:  353 ETASINTFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEPT 413          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.069e-26
Identity = 54/61 (88.52%), Postives = 59/61 (96.72%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            ETASI+ FSWGVANRGCSIRVGR+TEK GKGYLEDRRPASNMDPYVVT+LLAE+T+LWEPT
Sbjct:  355 ETASINDFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEPT 415          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA2_HORVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.475e-25
Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            ETASI  FSWGVANRGCSIRVGR+TE +GKGYLEDRRPASNMDPY VT+LLAETTILWEPT
Sbjct:  359 ETASISDFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYTVTALLAETTILWEPT 419          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNAC_MAIZE (Glutamine synthetase, chloroplastic OS=Zea mays GN=GLN2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.604e-25
Identity = 52/61 (85.25%), Postives = 58/61 (95.08%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            ETASI +FSWGVANRGCSIRVGR+TE +GKGYLEDRRPASNMDPY+VT LLAETTILW+P+
Sbjct:  348 ETASIGTFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYIVTGLLAETTILWQPS 408          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA2_PHAVU (Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.129e-24
Identity = 51/62 (82.26%), Postives = 58/62 (93.55%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            R ETA I++FSWGVANRG S+RVGR+TEKQGKGY EDRRPASNMDPYVVTS++AETTILW+P
Sbjct:  295 RHETADINTFSWGVANRGSSVRVGRDTEKQGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356          
The following BLAST results are available for this feature:
BLAST of EY703225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GLNAC_BRANA2.058e-2791.80Glutamine synthetase, chloroplastic OS=Brassica na... [more]
GLNA2_DAUCA4.584e-2791.80Glutamine synthetase, chloroplastic OS=Daucus caro... [more]
GLNA2_ORYSJ7.820e-2791.80Glutamine synthetase, chloroplastic OS=Oryza sativ... [more]
GLNA2_ARATH1.021e-2690.16Glutamine synthetase, chloroplastic/mitochondrial ... [more]
GLNA4_PHAVU1.742e-2690.16Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNA2_MEDSA3.881e-2688.52Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNA2_PEA5.069e-2688.52Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNA2_HORVU1.475e-2588.52Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNAC_MAIZE5.604e-2585.25Glutamine synthetase, chloroplastic OS=Zea mays GN... [more]
GLNA2_PHAVU2.129e-2482.26Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-C04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703225 ID=EY703225; Name=EY703225; organism=Citrus sinensis; type=EST; length=790bp
CCACGCGTCCGGAAACAGCTAGCATTGACTCATTTTCTTGGGGTGTGGCA
AATCGTGGTTGCTCAATCCGTGTGGGACGTGAAACTGAGAAGCAAGGCAA
AGGTTACTTGGAAGATAGGCGTCCAGCTTCAAACATGGACCCTTATGTAG
TGACCTCGTTACTGGCTGAAACTACAATATTGTGGGAACCCACACTTGAG
GCTGAAGCGCTAGCTGCTCAGAAGTTGGCATTGAATGTCTGAAGTTGATT
ATAGATCAACTGAAGAACTTGAGAAGCAGTCTCTTGGATTTAAATTGCCC
GTGCTTGGGGGAATACTTTTCCCTTTCCTTTTTAGTTCTTTAGGGAAGAA
CCTTGTAAATAAAAGGTCCCGAAGTTAATGTTCATGCCCAAGTTAATCGA
TCCTCAGATTGAAGATATATCCTTCAGATCAGATCAGTTCATAGTTGGTT
TCAGGTTTACGCATGTTTTACATGGATGCTTGGACCATTATTGTTCTTTT
GGACCATATCTTGAATGGCTTTTTATACCAGTTCATCAATGCTATCGCGT
GTTTTTTAGCCATAAAAGGAAAAAGTGTTGAGTAGAAAATTCTGAAGCTG
ACTTTTTTCTTCTGAAACATGTTTTGGTCAGAAGATGCTACATGTAGTGA
TTGTGTCCTAAGCTTTTTTATTTTGGCTTTTCCTTTTTTACTTTAACCTG
CCAAGAATGCAGAAAGAAATGGACTTNCCGGNNAATGGGGGTTTCGCCAA
AAGCAAATTCTGTCCCGTTACTGAAAAAAAAAAAAAGGGG
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