EY672550

Overview
NameEY672550
Unique NameEY672550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY672550 vs. ExPASy Swiss-Prot
Match: YAB9_SCHPO (Uncharacterized membrane protein C2G11.09 OS=Schizosaccharomyces pombe GN=SPAC2G11.09 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.100e-18
Identity = 53/179 (29.61%), Postives = 93/179 (51.96%), Query Frame = 1
Query:   16 FTVLNVFIGVTVGGTLFKTFKSIEKDPNSIVDVLANSLPGNATFFLTYVALQFFVGYGLELSRIVPLIIYHLKRKYLCKTEAELKEAWFPGDLGYGTRVPSDMLIVTIVFCYSCIAPLIIPFGVVYFALGWLILRNQALKVYVPAYESYGRMWPHMFLRLVAALLLDQITMLGYFGSKK 552
            +  +N F+   + G+   +   + KD  S    LAN LP  A FF+  + LQ    + L+L ++  L  Y ++R ++  + A  K+   P     G  +P  M I+ I  CYS I+PLI+ FG++YF +G+L+ + + +        S G +W  +FLR++   ++ Q+TM+G    +K
Sbjct:  540 YLFVNFFLVYVIAGST--SIWELAKDTTSFAHFLANRLPHQAQFFIDLIVLQGIGMFPLKLIQLGKLSSYFVRRSFVPYSIAS-KKFETPDSFSVGIFLPQPMFIMLICLCYSIISPLILVFGLIYFIIGFLVYKYELIYQMEHPQHSTGELWSTIFLRMIFGCVIMQLTMMGLMSLRK 715          
BLAST of EY672550 vs. ExPASy Swiss-Prot
Match: RSN1_YEAST (Uncharacterized protein RSN1 OS=Saccharomyces cerevisiae GN=RSN1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.675e-16
Identity = 55/183 (30.05%), Postives = 92/183 (50.27%), Query Frame = 1
Query:   16 FTVLNVFIGVTVGGTLFKTFKSIEKDPNSIVDVLANSLPGNATFFLTYVALQFFVGYGLELSRIVPLIIYHLKRKYLCKTEAELKEAW--FPG--DLGYGTRVPSDMLIVTIVFCYSCIAPLIIPFGVVYFALGWLILRNQALKVYVPAYESYGRMWPHMFLRLVAALLLDQITMLGYFGSKK 552
            F V+ VF+  T+      T   I K+P   +D+LA++LP  + FF++YV LQ        L +IVPLI++++   +L   +  +++ W  F G   + +GT  P    +  I F YS I+PLI+ F  V F L ++        VY  + ++ G  +P    + +  + + QI +LG F   K
Sbjct:  485 FQVIQVFLVTTLSSAATSTVTEIVKEPTKAMDLLASNLPKASNFFMSYVILQGLSISSGALLQIVPLILFYVLGAFL---DGTVRKKWNRFCGLSSMQWGTAFPVYTNLAVITFSYSIISPLILLFAAVAFFLLYIAYLYNLTYVYQESPDARGIYYPRALFQTIVGIYIGQICLLGLFAVGK 664          
BLAST of EY672550 vs. ExPASy Swiss-Prot
Match: YL241_YEAST (Uncharacterized membrane protein YLR241W OS=Saccharomyces cerevisiae GN=YLR241W PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 48/174 (27.59%), Postives = 87/174 (50.00%), Query Frame = 1
Query:   13 YFTVLNVFIGVTVGGTLFKTFKSIEKDPNSIVDVLANSLPGNATFFLTYVALQFFVGYGLELSRIVPLIIYHLKRKYLCKTEAELKEAWFPGDLGYGTRVPSDMLIVTIVFCYSCIAPLIIPFGVVYFALGWLILRNQALKVYVPAYESYGRMWPHMFLRLVAALLLDQITMLG 534
            ++  +N+F+  T+ GT    + +   D   I   LA S+   + F++  + LQ    +  +L  +  LI + L  K   KT  +  E + P    +G ++P  +LI+ I   YS ++  I+  G+ YF +G+ + + Q +        S G++WP +F R++  LLL Q+TM G
Sbjct:  532 FYIFVNLFLVFTLAGTA-SNYWAYLSDTTKIAYQLATSVKEFSLFYVDLIILQGIGMFPFKLLLVGSLIGFPLV-KIKAKTPRQRNELYNPPIFNFGLQLPQPILILIITLIYSVMSTKILTSGLAYFIIGFYVYKYQLIFATDHLPHSTGKVWPLIFRRIIVGLLLFQLTMTG 703          
BLAST of EY672550 vs. ExPASy Swiss-Prot
Match: YA7D_SCHPO (Uncharacterized membrane protein C24H6.13 OS=Schizosaccharomyces pombe GN=SPAC24H6.13 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 50/176 (28.41%), Postives = 84/176 (47.73%), Query Frame = 1
Query:   16 FTVLNVFIGVTVGGTLFKTFKSIEKDPNSIVDVLANSLPGNATFFLTYVALQFFVGYGLELSRIVPLIIYHLKRKYLCKTEAELKEAWFPGDL-GYGTRVPSDMLIVTIVFCYSCIAPLIIPFGVVYFALGWLILRNQALKVYVPAYESYGRMWPHMFLRLVAALLLDQITMLGYF 540
            F V+ VF+  T+          + K+P S + +LA++LP  + F+++Y  LQ     G  L +IV L++  +  +    T  +    W       +GT  P   L+VTI+ CYS IAP+II F  V F L +       + V     ++ GR +P    ++   L L ++ ++G F
Sbjct:  472 FQVVQVFLVTTMTSAATSAVVQVIKEPASSMTLLASNLPKASNFYISYFLLQGLSIPGGALLQIVTLLLSKVLGRIFDNTPRKKWNRWNQLSAPSWGTVYPVYSLLVTIMICYSIIAPIIIGFAAVAFVLIYFAYSYNLIYVLGHNADAKGRNYPRALFQVFVGLYLAEVCLIGLF 647          
The following BLAST results are available for this feature:
BLAST of EY672550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YAB9_SCHPO1.100e-1829.61Uncharacterized membrane protein C2G11.09 OS=Schiz... [more]
RSN1_YEAST6.675e-1630.05Uncharacterized protein RSN1 OS=Saccharomyces cere... [more]
YL241_YEAST6.907e-1327.59Uncharacterized membrane protein YLR241W OS=Saccha... [more]
YA7D_SCHPO6.907e-1328.41Uncharacterized membrane protein C24H6.13 OS=Schiz... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-101-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY672550 ID=EY672550; Name=EY672550; organism=Citrus sinensis; type=EST; length=821bp
CCACGCGTCCGCTATTTCACTGTGTTGAATGTTTTTATTGGAGTCACAGT
GGGTGGAACATTGTTCAAGACATTCAAGTCCATTGAGAAGGATCCAAACT
CAATTGTTGACGTACTAGCAAATAGCCTACCTGGAAATGCAACTTTCTTC
CTGACATATGTGGCTCTGCAGTTCTTTGTTGGCTATGGACTTGAGTTATC
TCGAATAGTTCCTCTGATTATATATCATCTAAAGAGGAAGTATCTTTGCA
AGACTGAAGCTGAACTAAAAGAAGCTTGGTTTCCTGGAGATCTTGGCTAT
GGAACTAGAGTTCCCAGTGATATGCTTATTGTCACAATTGTCTTCTGCTA
CTCTTGCATAGCTCCTTTGATCATCCCATTTGGTGTTGTATACTTTGCCC
TTGGATGGCTTATCCTTAGGAATCAGGCACTTAAAGTTTATGTTCCAGCA
TATGAGAGCTATGGAAGAATGTGGCCACACATGTTTCTCCGCCTTGTCGC
TGCCCTGCTACTGGACCAAATTACTATGCTTGGTTACTTTGGGTCCAAGA
AATTCATTTATGTTGGATTCCTACCTCCACTTCCTATCTTGTCCTTGATC
TTTGACTATATTTGTCGAAAAAGAATCGAGAAAGCTTTCTCTGACCCGGC
TCTTTGAAATGCCTCCACCTGAACTTGAAGGAACCCCTAGGATGGAGTAG
AACCTCTAATCTTACATACGACCAAGATGAACACCCAGCAAGGCATGACG
TACAGTAGAAGAAACAGAACTAAGCAAGCGAGCAGGGGCATTGGTGACGC
TACGAGGAGGAATAACAACCA
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