EY650922

Overview
NameEY650922
Unique NameEY650922
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length505
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_ORYSI (Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. indica GN=ETFB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 8.217e-31
Identity = 64/77 (83.12%), Postives = 75/77 (97.40%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARVI 233
            VITTDLRLNQPRYATLPNIMKAKSK IKK TP++L+VD++SD+EV++VTEPPKRKAGVILSSV+ELID+LKNEARV+
Sbjct:  177 VITTDLRLNQPRYATLPNIMKAKSKVIKKVTPEDLDVDIRSDMEVVEVTEPPKRKAGVILSSVDELIDRLKNEARVL 253          
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_ORYSJ (Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=ETFB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.073e-30
Identity = 63/77 (81.82%), Postives = 75/77 (97.40%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARVI 233
            VITTDLRLNQPRYATLPNIMKAKSK IKK TP++L+VD++SD+EV++VTEPPKRKAGVILSSV+EL+D+LKNEARV+
Sbjct:  177 VITTDLRLNQPRYATLPNIMKAKSKVIKKVTPEDLDVDIRSDMEVVEVTEPPKRKAGVILSSVDELVDRLKNEARVL 253          
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_ARATH (Electron transfer flavoprotein subunit beta, mitochondrial OS=Arabidopsis thaliana GN=ETFB PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.550e-29
Identity = 61/77 (79.22%), Postives = 73/77 (94.81%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARVI 233
            VITTDLRLNQPRYA+LPNIMKAKSKPIKK T Q+L VD+KSD+E+++VTEPPKRK+GV++SSV+ELIDKLKNEA V+
Sbjct:  175 VITTDLRLNQPRYASLPNIMKAKSKPIKKMTVQDLKVDIKSDIEILEVTEPPKRKSGVMVSSVDELIDKLKNEAHVV 251          
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_BRAJA (Electron transfer flavoprotein subunit beta OS=Bradyrhizobium japonicum GN=etfB PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.454e-19
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARVI 233
            ++TTDLRLN+PRYA+LPNIMKAK KPI + T  +  VDV + LEV++ TEP  RKAGV +  V EL+ KLKNEA V+
Sbjct:  173 IVTTDLRLNEPRYASLPNIMKAKKKPIAEKTVADYGVDVTARLEVLKTTEPAGRKAGVKVKDVAELVSKLKNEAGVL 249          
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_PSEAE (Electron transfer flavoprotein subunit beta OS=Pseudomonas aeruginosa GN=etfB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.099e-18
Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARVI 233
            ++TTDLRLN+PRYA+LPNIMKAK KP+   TP  L V   S ++ ++V  P  R AG+ + SV EL++KLKNEA+VI
Sbjct:  173 IVTTDLRLNEPRYASLPNIMKAKKKPLDVVTPDALGVSTASTVKTLKVEAPAARSAGIKVKSVAELVEKLKNEAKVI 249          
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_PONAB (Electron transfer flavoprotein subunit beta OS=Pongo abelii GN=ETFB PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 3.031e-17
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARV 230
            V+T DLRLN+PRYATLPNIMKAK K I+   P +L VD+ S L VI V +PP+R AGV + + E+L+ KLK   R+
Sbjct:  180 VVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255          
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_PARDE (Electron transfer flavoprotein subunit beta OS=Paracoccus denitrificans GN=etfB PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.031e-17
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARVI 233
            V+T DLRLN+PRYA+LPNIMKAK KP+ + T  +  VDV   LEV+ V EP  RKAG+ + SV+EL+ KLK EA VI
Sbjct:  177 VVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKVGSVDELVGKLK-EAGVI 252          
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_HUMAN (Electron transfer flavoprotein subunit beta OS=Homo sapiens GN=ETFB PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 3.031e-17
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARV 230
            V+T DLRLN+PRYATLPNIMKAK K I+   P +L VD+ S L VI V +PP+R AGV + + E+L+ KLK   R+
Sbjct:  180 VVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255          
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_MOUSE (Electron transfer flavoprotein subunit beta OS=Mus musculus GN=Etfb PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 1.504e-16
Identity = 42/76 (55.26%), Postives = 54/76 (71.05%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARV 230
            V+T DLRLN+PRYATLPNIMKAK K I+     +L VD+ S + VI V EPP+R AGV + + E+L+ KLK   R+
Sbjct:  180 VVTADLRLNEPRYATLPNIMKAKKKKIEVVKAGDLGVDLTSKVSVISVEEPPQRSAGVKVETTEDLVAKLKEVGRI 255          
BLAST of EY650922 vs. ExPASy Swiss-Prot
Match: ETFB_RAT (Electron transfer flavoprotein subunit beta OS=Rattus norvegicus GN=Etfb PE=2 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 2.566e-16
Identity = 42/76 (55.26%), Postives = 54/76 (71.05%), Query Frame = 3
Query:    3 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEELIDKLKNEARV 230
            V+T DLRLN+PRYATLPNIMKAK K I+     +L VD+ S + VI V EPP+R AGV + + E+L+ KLK   R+
Sbjct:  180 VVTADLRLNEPRYATLPNIMKAKKKKIEVIKAGDLGVDLTSKVSVISVEEPPQRLAGVKVETTEDLVAKLKEVGRI 255          
The following BLAST results are available for this feature:
BLAST of EY650922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ETFB_ORYSI8.217e-3183.12Electron transfer flavoprotein subunit beta, mitoc... [more]
ETFB_ORYSJ1.073e-3081.82Electron transfer flavoprotein subunit beta, mitoc... [more]
ETFB_ARATH1.550e-2979.22Electron transfer flavoprotein subunit beta, mitoc... [more]
ETFB_BRAJA1.454e-1961.04Electron transfer flavoprotein subunit beta OS=Bra... [more]
ETFB_PSEAE2.099e-1855.84Electron transfer flavoprotein subunit beta OS=Pse... [more]
ETFB_PONAB3.031e-1756.58Electron transfer flavoprotein subunit beta OS=Pon... [more]
ETFB_PARDE3.031e-1759.74Electron transfer flavoprotein subunit beta OS=Par... [more]
ETFB_HUMAN3.031e-1756.58Electron transfer flavoprotein subunit beta OS=Hom... [more]
ETFB_MOUSE1.504e-1655.26Electron transfer flavoprotein subunit beta OS=Mus... [more]
ETFB_RAT2.566e-1655.26Electron transfer flavoprotein subunit beta OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-016-C01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650922 ID=EY650922; Name=EY650922; organism=Citrus sinensis; type=EST; length=505bp
CTGTAATCACCACTGATTTGAGACTCAACCAACCGAGGTACGCGACACTC
CCCAACATAATGAAGGCAAAATCGAAACCAATAAAGAAATATACTCCCCA
GGAGCTAAACGTGGATGTCAAATCTGATTTGGAGGTGATTCAAGTAACAG
AACCTCCCAAGAGAAAAGCTGGGGTTATATTATCTTCTGTGGAAGAGCTC
ATTGACAAGCTAAAAAATGAAGCCCGCGTCATTCAAAACTTTCTTTGTAA
ACTGTTATTCCCCATCGAAATCACTAGAACAAAAATTTAAAGAACTTCAG
GCGTCCAAATAAATTATCCTTTAGTTCAAATAACAGTTATGGCCTCAGAA
ATGCACATTTGGCCTGCCATTGCTGTTTTTCACGAAATTTCTGTGAACAA
AAGTGGCTGTCATTCCACGGGATTCTCGGCTTGACAATACATTTGTGCCA
AATTATTTTATAATCCATATTAAATGCTTCGTTCGGTAAAAAAAAAAAAA
AAACG
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