EY736322

Overview
NameEY736322
Unique NameEY736322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY736322 vs. ExPASy Swiss-Prot
Match: LTRA_KLEPN (Probable HTH-type transcriptional regulator ltrA OS=Klebsiella pneumoniae GN=ltrA PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.339e-41
Identity = 43/69 (62.32%), Postives = 48/69 (69.57%), Query Frame = 3 
Query:   48 GRQLQPIEHLICATPHYLAEHGAPQDPHDLLEHSCIYLGETPGDARWKFRQCSKAVTVGVRGRYAANHS 254
            G+ L PI H+ICAT  YL +HG P  P DL  HSCI LGETP DARWKFR+  K  TV   GRYAANH+
Sbjct:  157 GKPLMPIRHVICATEAYLQQHGTPYTPQDLRAHSCISLGETPADARWKFRREGKTETVQTYGRYAANHT 225

HSP 2 Score: 88.1965 bits (217), Expect = 1.339e-41
Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 1 
Query:  265 LDAVLQHVGIGSLPYFTARHALEAGEVVQVSPGWDFIASYHGDAWLLHSPTRYLPPKLRVFIDYLVE 465
            LDAV QH+GIGSLP FTAR AL  G++VQV P W+FI+SY GD WLL +  +++P ++R  IDYL E
Sbjct:  229 LDAVRQHLGIGSLPLFTAREALANGDIVQVLPEWEFISSYSGDLWLLWAGDKHMPARMRAMIDYLSE 295

HSP 3 Score: 29.6462 bits (65), Expect = 1.339e-41
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 2 
Query:    2 DPSLRITDSPPPGLVGAPITTYR 70
            D +LRITD+P PGL G P+   R
Sbjct:  142 DLALRITDTPSPGLHGKPLMPIR 164
The following BLAST results are available for this feature:
BLAST of EY736322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LTRA_KLEPN1.339e-4162.32Probable HTH-type transcriptional regulator ltrA O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-G07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736322 ID=EY736322; Name=EY736322; organism=Citrus sinensis; type=EST; length=747bp
CGACCCGAGCCTCCGCATCACCGACAGCCCGCCGCCGGGCTTGGTTGGGG
CGCCAATTACAACCTATCGAACACTTGATCTGCGCCACGCCGCATTACCT
GGCGGAGCACGGTGCGCCGCAGGATCCCCATGATTTGTTGGAGCACAGTT
GCATCTACCTGGGCGAGACGCCTGGGGATGCGCGCTGGAAGTTTCGCCAG
TGCAGCAAGGCGGTGACGGTCGGGGTGCGCGGGCGGTATGCGGCGAATCA
CAGCGGGGTGCTCGCTGGATGCGGTGTTGCAGCATGTGGGAATTGGCAGC
TTGCCGTATTTCACGGCGCGGCATGCGCTGGAAGCGGGGGAGGTGGTGCA
GGTGTCGCCGGGGTGGGATTTTATTGCGTCGTACCACGGGGATGCCTGGT
TGCTGCATTCGCCGACGCGATATCTGCCGCCGAAGTTGCGGGTGTTTATT
GATTATCTGGTGGAGTGCATGGCCCAAGAGCCGACGCTGAAGAAACGGTA
GGAATGGGATCCAAATGTGGGGGTGGGCGCGGCAGGCCAGCGCGGGTCTC
GGCCGGGGGGGGGGGGGGGCGGCGGCGGCCTGCCGGGCAGGCGCCCGGTG
CGTCTGCGTGTGGGCGGGAAAAATGGTGTGCAATGCGAGCAGGGTGGCCG
GTTCGACGAGTTTCGCGGGCAGGGGGGGGGGGAGGGTGGGAGGGAAGGGC
GAGGGGGTGGGGGGGGGGTGGGCGGCTGGGAGGGGTTGGGGGGGGCG
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