EY703135

Overview
NameEY703135
Unique NameEY703135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length438
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.638e-17
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 2
Query:   35 KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKSATVKKN 178
            +IIYGGSVNGANCKEL   PDVDGFLVGGASLKPEFIDIIK+A VK+N
Sbjct:  206 RIIYGGSVNGANCKELGGQPDVDGFLVGGASLKPEFIDIIKAAEVKRN 253          
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 4.501e-17
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 2
Query:   35 KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKSATVK 172
            +IIYGGSV GANCKELAA PDVDGFLVGGASLKPEFIDII SATVK
Sbjct:  206 RIIYGGSVTGANCKELAAKPDVDGFLVGGASLKPEFIDIINSATVK 251          
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.309e-16
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 2
Query:   35 KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKSATVKKN 178
            +IIYGGSVNGAN KELA  PD+DGFLVGGASLKPEF+DIIKSATVK +
Sbjct:  206 RIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPEFVDIIKSATVKSS 253          
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 3.810e-16
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 2
Query:   35 KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKSATVK 172
            +IIYGGSV GA+CKELAA PDVDGFLVGGASLKPEFIDII +ATVK
Sbjct:  206 RIIYGGSVTGASCKELAAQPDVDGFLVGGASLKPEFIDIINAATVK 251          
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 4.976e-16
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 2
Query:   35 KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKSATVK 172
            +IIYGGSV  ANCKELAA PDVDGFLVGGASLKPEFIDII +ATVK
Sbjct:  206 RIIYGGSVTAANCKELAAQPDVDGFLVGGASLKPEFIDIINAATVK 251          
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.109e-15
Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = 2
Query:   35 KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKSATVKKN 178
            +IIYGGSVNG NCKEL    DVDGFLVGGASLKPEFIDIIK+A VKK+
Sbjct:  206 RIIYGGSVNGGNCKELGGQADVDGFLVGGASLKPEFIDIIKAAEVKKS 253          
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.891e-15
Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 2
Query:    5 DNASGSCS*H-KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKSATVKKN 178
            DN S   S   +IIYGGSV+G+NCKEL    DVDGFLVGGASLKPEFIDIIK+A VKK+
Sbjct:  136 DNVSAEVSASTRIIYGGSVSGSNCKELGGQTDVDGFLVGGASLKPEFIDIIKAAEVKKS 194          
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 1.226e-14
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 2
Query:   35 KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKSATVK 172
            +IIYGGSV GA+CKELAA  DVDGFLVGGASLKPEFIDII +A VK
Sbjct:  206 RIIYGGSVTGASCKELAAQADVDGFLVGGASLKPEFIDIINAAAVK 251          
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_RAT (Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.770e-13
Identity = 34/42 (80.95%), Postives = 38/42 (90.48%), Query Frame = 2
Query:   35 KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKS 160
            +IIYGGSV GA CKELA+ PDVDGFLVGGASLKPEF+DII +
Sbjct:  206 RIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247          
BLAST of EY703135 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.770e-13
Identity = 34/42 (80.95%), Postives = 38/42 (90.48%), Query Frame = 2
Query:   35 KIIYGGSVNGANCKELAAPPDVDGFLVGGASLKPEFIDIIKS 160
            +IIYGGSV GA CKELA+ PDVDGFLVGGASLKPEF+DII +
Sbjct:  205 RIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 246          
The following BLAST results are available for this feature:
BLAST of EY703135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
TPIS_PETHY2.638e-1785.42Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_ORYSJ4.501e-1791.30Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_COPJA1.309e-1683.33Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_SECCE3.810e-1686.96Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_MAIZE4.976e-1686.96Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_ARATH1.109e-1581.25Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_LACSA1.891e-1571.19Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_HORVU1.226e-1482.61Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_RAT1.770e-1380.95Triosephosphate isomerase OS=Rattus norvegicus GN=... [more]
TPIS_RABIT1.770e-1380.95Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-016-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703135 ID=EY703135; Name=EY703135; organism=Citrus sinensis; type=EST; length=438bp
TCCAGACAACGCGTCCGGAAGTTGCAGCTGACATAAAATCATCTACGGAG
GTTCTGTAAATGGAGCAAATTGCAAAGAATTGGCTGCACCACCTGATGTG
GATGGATTTTTGGTTGGTGGAGCTTCTCTAAAGCCGGAGTTCATCGATAT
TATCAAGTCTGCCACAGTGAAGAAGAATTGAAGTTAAAGACCAAGCTACT
CGGCTTGCTGATGCCTGCAGTTTTCTCTGTTATGCGTTCTGGAAACTAGC
GTTGTAATTTTTGTGGTCTGTTAAGTGTTACCAACGCCTTTCCTGTATAA
TAAGTTAAATCTTCAGAATTCTTAAGAATCTCTTTCCTATTTCAGTGGGG
ATTTGAAACTNGNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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