EY703125

Overview
NameEY703125
Unique NameEY703125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2446 contig Csv1_Contig2446:41..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY703125 vs. ExPASy Swiss-Prot
Match: Y5957_ARATH (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana GN=At5g39570 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.266e-38
Identity = 92/191 (48.17%), Postives = 106/191 (55.50%), Query Frame = 2 
Query:   98 ITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKXXXXXXXXXXXXXXXXXXXXXXXAYGIQPGMGRXXXXXXXXXXXXXXXXXAKRPDSQEYGSGYGKRPESE-EYGSGYGRKPDSEVYGSGYGRRPESG-ESGFGGRTESEYGGS-AYGRKPEYESGYGQKPEY 661
            IT+ YGRP+PPSDETCYP SS  D DF+Y RP+F+   EPSAY DEALN EYSSY+RPK                        YG + G GR                   R   Q YGSGYG R E+E EYGSG G + + E     YGRRPESG  SG+GGR+ESEY    +YGR  E E GY +KP Y
Sbjct:   28 ITVIYGRPIPPSDETCYPLSSGVDDDFEYERPEFTQIHEPSAYGDEALNTEYSSYSRPK-PRPAFRPDSGGGGHVQGERPNPGYGSESGYGRKPESEYGSGYGGQTEVEYGRRPEQSYGSGYGGRTETESEYGSGGGGRTEVE-----YGRRPESGLGSGYGGRSESEYERKPSYGRSEEQEEGY-RKPSY 211

HSP 2 Score: 28.4906 bits (62), Expect = 1.266e-38
Identity = 16/31 (51.61%), Postives = 16/31 (51.61%), Query Frame = 3 
Query:  729 YGRKPEYESGYGSKPEFESRYGRKPEYESGY 821
            YGR  E E GY  KP     YGR  E E GY
Sbjct:  211 YGRSEEQEEGY-RKPS----YGRSEEQEEGY 236
The following BLAST results are available for this feature:
BLAST of EY703125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5957_ARATH1.266e-3848.17Uncharacterized protein At5g39570 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-016-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703125 ID=EY703125; Name=EY703125; organism=Citrus sinensis; type=EST; length=867bp
ATCGGAACATTTCACAATGCCGTACTACGCTGACAATGACGATGACGTTA
CTGATTTCGACGATTACGATCCAACACCCTACGATGGTGGATACGACATC
ACTTTGACTTACGGCCGTCCTCTGCCACCGTCCGATGAGACTTGTTACCC
ATCATCGTCGGCGTCAGATGGGGACTTCGACTACGCTCGTCCCAAGTTCT
CGTCGCACTCGGAGCCTTCAGCCTACGCTGACGAAGCTCTCAATAACGAG
TACAGCTCCTACGCCCGACCAAAGCCTCGTCCCGGTTTCGTACCCGGGTC
AGGGGGTGGGTCGGGTTATGGAGGAAGGCCCCAGCCGCAGCCGGCGTATG
GGATTCAGCCTGGAATGGGAAGGCCCGAACCTTATGGGTCGGGGAGGTCT
GAATCTGAATATGGTTCTGGGTATGCGAAGAGGCCTGATTCGCAGGAATA
TGGATCTGGGTACGGAAAGAGACCCGAGTCGGAGGAATATGGATCTGGGT
ACGGCAGGAAACCTGATTCCGAGGTGTATGGCTCTGGATATGGGCGGAGA
CCCGAGTCGGGTGAATCCGGATTTGGTGGTAGGACTGAGTCCGAGTATGG
AGGATCAGCGTATGGACGAAAACCCGAATATGAGTCCGGTTATGGCCAGA
AACCGGAATATGAATCTGGCTTTGGTGGAAACCAGGGTACGAGTCTGGAT
ATGGAAGCAAACCCGAATTTGATCCGGATATGGTAGGAAACCCGAGTACG
AGTCTGGGTACGGCAGCAAGCCGGAATTTGAATCCCGCTATGGTAGGAAA
CCCGAGTATGAGTCCGGCTACGGGAGAAGCATGATGATAGGTCCCGCTAT
GGGAGTAGCCCCATGAA
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