EY650408

Overview
NameEY650408
Unique NameEY650408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY650408 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.396e-83
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 2 
Query:    2 LKVTKLGVGAWSWGDTSYWNNFQWDDRKMKAAKAAFDTSLDNGITFFDTAEVYGSRASFGAINSETLLGRFIKERKQRDPEVEVTVATKFAALPWRLGRQSVLAALKDSLFRLGLSSVELYQLHW 376
            LKVTKLG+G WSWGD SYWN+FQWDDRK+KAAK AFDTSLDNGI FFDTAEVYGS+ S GAI+SETLLGRFI+ERK+R P  EV+VATKFAALPWR GR+SV+ ALKDSL RL LSSV+LYQLHW
Sbjct:   56 LKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKGAFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERKERYPGAEVSVATKFAALPWRFGRESVVTALKDSLSRLELSSVDLYQLHW 180

HSP 2 Score: 113.235 bits (282), Expect = 3.396e-83
Identity = 61/86 (70.93%), Postives = 67/86 (77.91%), Query Frame = 2 
Query:  614 GFIDGLGDAVEQGLVKAVGVSNYSEKRLRNAYEKLKKRGIPLASNQVNYSLIYRNXXRNGVKLPVMNLG-SL*CILSYCSSALTGK 868
            G++DGLGDAVEQGLVKAVGVSNYSEKRLR+AYE+LKKRGIPLASNQVNYSLIYR   + GVK     LG +L         ALTGK
Sbjct:  188 GYLDGLGDAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPIAQGALTGK 273

HSP 3 Score: 25.0238 bits (53), Expect = 3.396e-83
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 3 
Query:  471 GIWGNEGYL 497
            G+WGNEGYL
Sbjct:  182 GLWGNEGYL 190
The following BLAST results are available for this feature:
BLAST of EY650408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1669_ARATH3.396e-8380.80Uncharacterized oxidoreductase At1g06690, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-F09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650408 ID=EY650408; Name=EY650408; organism=Citrus sinensis; type=EST; length=875bp
TTTGAAGGTGACAAAGCTTGGCGTTGGGGCTTGGTCATGGGGTGACACTA
GCTACTGGAATAACTTCCAATGGGATGACAGGAAGATGAAGGCTGCTAAA
GCTGCTTTTGATACCAGTCTGGATAATGGAATAACTTTTTTCGATACTGC
TGAAGTATATGGTTCTAGGGCCTCATTCGGTGCCATAAATTCCGAAACAC
TACTGGGAAGATTTATAAAGGAAAGGAAACAAAGGGATCCGGAAGTGGAG
GTTACTGTTGCAACCAAGTTTGCAGCTTTGCCATGGAGGCTGGGCCGTCA
GAGTGTCCTCGCTGCTCTTAAGGATTCCCTTTTCCGGCTTGGCCTTTCTT
CTGTTGAACTTTATCAGCTGCACTGGTCTGCGTCTCATGAATCTGTTTTT
TGTTTTTTTTTTTCTGAATTTCCTTGACAAACAGTTGCTAATCAATTGCT
TGCCATGGATTTTCAGGGCTGGAATTTGGGGAAATGAAGGTTACTTATTC
TTAATGCAATTGTTTCGTTGAACAACTGAAATTGTAAAGCTAGTAGAATT
GTCTGTTTGTAGAACCCAATTATGTTCATATTCAAAAGAATTACTATTGA
AAATCATTTTTCAGGGTTTATTGATGGTCTTGGAGATGCTGTGGAGCAGG
GCCTTGTGAAGGCTGTTGGTGTTTCAAATTACAGTGAGAAACGACTTCGC
AATGCTTACGAAAAGCTTAAAAAGAGAGGAATTCCATTAGCTTCAAACCA
AGTGAACTATAGCCTCATATACAGAAACCANAANAGAAATGGTGTGAAGC
TGCCTGTGATGAACTTGGGATCACTTTAATGCATATTGTCCTATTGCTCA
AGTGCTCTCACTGGAAAGTTACACC
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