EY650406

Overview
NameEY650406
Unique NameEY650406
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650406 vs. ExPASy Swiss-Prot
Match: YQJG_ECOLI (Uncharacterized protein yqjG OS=Escherichia coli (strain K12) GN=yqjG PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.301e-28
Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 3
Query:    6 RYICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLREYPNLFNYTKDIYQIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGPDIDYSSPHDRE 296
            RY+ GN+LTEADIRL+ TL+RFD VY  HFKC+K  + +Y NL+ + +DIYQ+P ++ TVN  HI+ HY+ SH +INP GII +GP  D   PH R+
Sbjct:  228 RYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRD 324          
BLAST of EY650406 vs. ExPASy Swiss-Prot
Match: GTO2_SCHPO (Glutathione S-transferase omega-like 2 OS=Schizosaccharomyces pombe GN=gto2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.224e-17
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 3
Query:    9 YICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLR-EYPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGP 263
            ++ G+ LTE D+RL+ T++RFD VY  HFKCN   +R  YP++  + K +Y + P+   T + +HIK HY  SH  INP GI PLGP
Sbjct:  220 FLLGDHLTETDVRLYTTIVRFDPVYVQHFKCNIGTIRHNYPHINQWLKRLYWKHPAFHETTDFKHIKCHYTQSHTQINPLGITPLGP 306          
BLAST of EY650406 vs. ExPASy Swiss-Prot
Match: GTO2_YEAST (Glutathione S-transferase omega-like 2 OS=Saccharomyces cerevisiae GN=ECM4 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.655e-16
Identity = 43/90 (47.78%), Postives = 56/90 (62.22%), Query Frame = 3
Query:    9 YICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLRE-YPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGPDID 272
            +  G++LTEADIRL+ T+IRFD VY  HFKCN   +R  YP +  + +++Y    +   T +  HIK HY  SH  INP GI PLGP  D
Sbjct:  277 FTVGDQLTEADIRLYTTVIRFDPVYVQHFKCNFTSIRAGYPFIHLWVRNLYWNYDAFRYTTDFDHIKLHYTRSHTRINPLGITPLGPKPD 366          
BLAST of EY650406 vs. ExPASy Swiss-Prot
Match: GTO3_YEAST (Glutathione S-transferase omega-like 3 OS=Saccharomyces cerevisiae GN=GTO3 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.941e-15
Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 3
Query:    9 YICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLR-EYPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGPDIDYSSP 284
            +  G+ LTEAD+RL+ T++RFD VY  HFKCN   +R +Y  +  + K+IY +  +   T +  HIK  Y  S P +NP GI PLGP  D   P
Sbjct:  273 FAIGDTLTEADVRLYPTIVRFDVVYHQHFKCNLATIRDDYSRIHTWLKNIYWRHEAFQRTTDFTHIKLGYTRSQPRVNPIGITPLGPKPDIRPP 366          
BLAST of EY650406 vs. ExPASy Swiss-Prot
Match: GTO1_YEAST (Glutathione S-transferase omega-like 1 OS=Saccharomyces cerevisiae GN=GTO1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13
Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 3
Query:    9 YICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLRE-YPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYG---SHPSINPYGIIPLGPDIDYS 278
            ++ G RLTEADIRL+ ++IRFD VY  HFKCN K +R+ +P L  +  ++Y        T +  HIK  Y     S   IN +GI+PLGP  D S
Sbjct:  260 FVLGQRLTEADIRLYPSIIRFDVVYVQHFKCNLKTIRDGFPYLHLWLINLYWNYAEFRFTTDFNHIKLFYIRMEVSRNKINQFGIVPLGPKPDIS 354          
The following BLAST results are available for this feature:
BLAST of EY650406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
YQJG_ECOLI5.301e-2854.64Uncharacterized protein yqjG OS=Escherichia coli (... [more]
GTO2_SCHPO3.224e-1747.13Glutathione S-transferase omega-like 2 OS=Schizosa... [more]
GTO2_YEAST4.655e-1647.78Glutathione S-transferase omega-like 2 OS=Saccharo... [more]
GTO3_YEAST3.941e-1543.62Glutathione S-transferase omega-like 3 OS=Saccharo... [more]
GTO1_YEAST2.162e-1344.21Glutathione S-transferase omega-like 1 OS=Saccharo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-F07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650406 ID=EY650406; Name=EY650406; organism=Citrus sinensis; type=EST; length=519bp
AGCAACGATACATTTGTGGAAACAGGCTGACTGAAGCAGATATTCGGTTG
TTTGTCACGCTTATAAGATTTGATGAGGTTTATGCAGTTCACTTCAAGTG
CAACAAGAAACTATTACGAGAATATCCAAATCTGTTCAACTACACCAAAG
ACATATATCAGATTCCCAGCATGTCTAGCACTGTGAATATGCAACACATC
AAGCGGCATTACTATGGGAGCCATCCTTCTATCAATCCATATGGGATCAT
CCCTCTTGGCCCTGATATCGATTATTCTTCACCCCATGACAGAGAAAAAT
TTTCTGCATAATTTCCATATTTCTACAGTGCCTAAGATGAGCTTGGTCAT
TGTTTATAAAAGCATTTTCTGTTTAGACTGTCAGCCGAGATGTGTATATA
TTCTGTGTGTGATGTTATTAAATAAATTTATTGTGAATGCTCTCTCTTGA
GAAACTTGGTAAATAAATTTCAGGGACTGGAGGCTTACTGGATTTAAAAA
AAAAAAAAAATAAAAAAAA
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