EY650404

Overview
NameEY650404
Unique NameEY650404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650404 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.550e-46
Identity = 106/176 (60.23%), Postives = 126/176 (71.59%), Query Frame = 1
Query:  154 RSGANQLSSVK--YLPSLRRNVNLSVRCTAEXXXXXXXXXXX-PTIPKAE---PQPP--KKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSYGGAAWFLGTCVLLTVASLVPLFKGVSVESKSDGFMTSDAELRNGMVAMLGLGALAFTESVNGGTL 657
            RS  NQ +++   Y+P+LRRNV+L VR  AE            PT P A    PQP   + P+MST FS++ AFSGPAPERINGRLAMIGFVAA+GVEI+KGQ +  QLS GG AWFLGT VLL++ASL+P F+GVSVESKS   M+SDAE  NG +AMLGL ALAFTE V G +L
Sbjct:   20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSL 195          
BLAST of EY650404 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.026e-31
Identity = 85/197 (43.15%), Postives = 117/197 (59.39%), Query Frame = 1
Query:   85 MAASLATQSMLASPVAARVTGIMRSGANQLSSVKY---LPSLRRNVNLSVRCTAEXXXXXXXXXXXP--TIPKAEPQPPKKPRMSTGFS-EVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSYGGAAWFLGTCVLLTVASLVPLFKGVSVESKSDGFMTSDAELRNGMVAMLGLGALAFTESVNGGTL 657
            MA+S    ++ A     + T I R G N L   K    LP +RRN   +VR   E              T        P +  ++T  + ++F+F G APERINGR AMIGFVAA+GVE++ G+DVF+Q+  GG  WFL T  +L +A+L+P+++G+S E+K++GF  SDAE+ NG  AM+GL ALAFTE V GG L
Sbjct:    1 MASSTCYATIPAMSCRGQST-ITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPL 196          
BLAST of EY650404 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28
Identity = 83/185 (44.86%), Postives = 107/185 (57.84%), Query Frame = 1
Query:   97 LATQSMLASPVAARVTGIMRSGANQLSSVKYLPSLRRNVNLSVRCTAEXXXXXXXXXXXPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSYG-GAAWFLGTCVLLTVASLVPLFKGVSVESKSDGFMTSDAELRNGMVAMLGLGALAFTESVNG 648
            +AT   ++S   A V  + RS A+   + + LP+L R   L VR   E           P+ P     PP KP+ ST   +  AFSGPAPERINGRLAM+GFV AL VE  +G  + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AEL NG  AMLGL ALA TE + G
Sbjct:    1 MATMMSMSSFAGAAV--VPRSSASSFGA-RSLPALGRRA-LVVRAQTEG----------PSAP-----PPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITG 166          
BLAST of EY650404 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.342e-28
Identity = 75/158 (47.47%), Postives = 93/158 (58.86%), Query Frame = 1
Query:  178 SVKYLPSLRRNVNLSVRCTAEXXXXXXXXXXXPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSYG-GAAWFLGTCVLLTVASLVPLFKGVSVESKSDGFMTSDAELRNGMVAMLGLGALAFTESVNG 648
            S + LP+L R   L VR   E           P  P     PP KP+ ST   +  AFSGPAPERINGRLAM+GFV AL VE  +G  + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AEL NG  AM+GL ALA TE + G
Sbjct:   20 SARSLPALGRRT-LVVRAQTEG----------PNAP-----PPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161          
BLAST of EY650404 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.462e-27
Identity = 69/127 (54.33%), Postives = 85/127 (66.93%), Query Frame = 1
Query:  274 PTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSY--GGAAWFLGTCVLLTVASLVPLFKGVSVESKSDGFMTSDAELRNGMVAMLGLGALAFTESVNG 648
            PT   A P+P  K + +    +  AFSGPAPERINGRLAM+GFVAAL VE ++G  +  Q+     G AWFL T  + +VASL+PL +G SVESKS G  ++DAEL NG  AMLGL ALA TE + G
Sbjct:  100 PTTIPAAPKPVTK-KANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITG 225          
BLAST of EY650404 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.591e-16
Identity = 58/128 (45.31%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  277 TIPKAEPQPPKKPRMSTG--FSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSYGGAAWFLGTCVLLTVASLVPLFKGVSVESKSD--GFMTSDAELRNGMVAMLGLGALAFTESVNG 648
            T P + P PP  P        +EV  FSG APE INGRLAM+GFVAALG E+S G+ V  QL        L T VL + ASL+P F       K D  G  T DAE+ NG  AM+G  A+   E + G
Sbjct:   47 TPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEMTNGRFAMIGFAAMLVYEGIQG 168          
The following BLAST results are available for this feature:
BLAST of EY650404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ELI_PEA2.550e-4660.23Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL3.026e-3143.15Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI9_HORVU1.076e-2844.86Low molecular mass early light-inducible protein H... [more]
ELI6_HORVU5.342e-2847.47Low molecular mass early light-inducible protein H... [more]
ELI5_HORVU3.462e-2754.33High molecular mass early light-inducible protein ... [more]
CBR_DUNBA3.591e-1645.31Carotene biosynthesis-related protein CBR, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-F05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650404 ID=EY650404; Name=EY650404; organism=Citrus sinensis; type=EST; length=782bp
CCACGCGTCCGCAAGGAACCCGCCGACCTGAAGCACCCAATTCCCGATTA
TACTTTGTTCTGTTTTCTACTTCATAAATTAAAAATGGCCGCATCACTTG
CTACTCAATCTATGCTGGCAAGTCCTGTAGCAGCTCGTGTGACTGGTATC
ATGAGATCCGGGGCAAACCAACTTTCCTCCGTCAAGTACTTGCCTAGTCT
GCGTAGAAATGTCAACTTATCCGTGCGCTGCACGGCAGAGGATGATCAGC
AGCAGCAGCAGAAAGATGATCAACCAACCATACCGAAAGCTGAGCCTCAG
CCACCAAAGAAGCCGCGGATGAGCACGGGGTTCTCTGAGGTGTTCGCGTT
CAGCGGGCCGGCACCGGAGAGGATAAACGGGAGGCTTGCGATGATTGGGT
TCGTGGCTGCATTGGGGGTGGAGATATCCAAGGGTCAGGATGTGTTTGCC
CAGTTATCATACGGCGGGGCTGCCTGGTTCTTGGGGACCTGTGTTTTGCT
CACGGTTGCGTCCCTGGTTCCTTTGTTTAAAGGTGTCAGCGTGGAGTCTA
AATCGGATGGGTTCATGACTTCNGATGCTGAGTTGCGGAATGGGATGGTT
GCTATGCTTGGCCTTGGTGCTTTGGCTTTCACCGAGTCTGTTAATGGCGG
CACCCTTGCTTAAGCGTAAATTTGCTTAGATCTGTAGATCTGTATTTTTT
TTGACTAATTAATGGATGAGATCCTACTGTGATGAAATCGCTATTTCTCC
TGCGGGGGNCCAATTGGGGAAACCAAAATCTT
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