EY702988

Overview
NameEY702988
Unique NameEY702988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.179e-17
Identity = 55/172 (31.98%), Postives = 86/172 (50.00%), Query Frame = 1
Query:  223 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGK--CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEML--KTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGR 726
            + + +DVF+  ++ + N   LG R+        Y W +YK+V DL   + +A+   G +       GI+  N PEW+I  +AC A  +  VPLYDTLGA A+ +I+  + +S+ F ++ +   +L      K T  LK IV       E  E+ +K G+ V S      LGR
Sbjct:   89 VRTLYDVFQRGIQVSNNGPCLGSRK----PDQPYEWLSYKQVEDLSECIGSALLQKGFQASPDQFIGIFAQNRPEWVIIEQACFAYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKARILLESVENKLTPGLKIIVVMDSYGSELVEQGKKCGVEVISLKAMEGLGR 256          

HSP 2 Score: 31.5722 bits (70), Expect = 5.179e-17
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  759 NDICTIMYTSGTTGDPKGVM 818
            +D+  I +TSGTTG+PKG M
Sbjct:  268 DDLAVICFTSGTTGNPKGAM 287          
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.475e-16
Identity = 57/188 (30.32%), Postives = 103/188 (54.79%), Query Frame = 1
Query:  235 WDVFRMAVERNPNNRMLGQREIV-DGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEI-EKYGLAVYSWDEFLQLGRDKQFDLPVKKKMTSVQ-LCILV 789
            +DV+R  + ++ ++  LG RE++ DGK G Y W +YK+       + +A+   G+ +  + GI+ +N PEW++   A     L  V LY TLGA A+E+++ HS +S+   E K + ++L + P TT  +KTIVS+  +     ++  +   + +Y   +F +LG       P + ++ S + LC L+
Sbjct:   57 YDVYR--INKDSDSNFLGIRELLADGKRGDYKWISYKQACIRANNIGSALVQLGLNKGDRIGIFSINRPEWVLSDMAAMNHSLVPVALYATLGANAIEYVVNHSEISVLLCEGKNVEKIL-SMPGTT--IKTIVSYDPLPQATLDKFKDNENVKLYLLSDFEKLGEQN----PAQHEVPSPEDLCTLL 235          
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: FCSB_DICDI (Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.463e-15
Identity = 35/142 (24.65%), Postives = 70/142 (49.30%), Query Frame = 1
Query:  304 DGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGRD 729
            +G  GK+ W +Y    +    +   +   G++ + K GI+  N  EW+I   A        V  Y+TLG  ++ ++  H+ + +AF   + + + L    K  + LKTI+ F  +  E     ++ G+ +Y++DE ++ G++
Sbjct:   90 NGNLGKFEWISYNTYLERCEYIQQGLCELGLKPKSKVGIFSKNRLEWLIVHSASFIQSYCVVSFYETLGVESLSYVTEHAEIGLAFCSAETLQKTL-DIAKGVKVLKTIICFDSIDKEHYNIAKELGVTLYTYDEIMKKGKE 230          

HSP 2 Score: 35.039 bits (79), Expect = 4.463e-15
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  765 ICTIMYTSGTTGDPKGVM 818
            + TIMYTSGTTG PKGVM
Sbjct:  245 LSTIMYTSGTTGPPKGVM 262          
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: ACSL3_PONAB (Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abelii GN=ACSL3 PE=2 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 2.143e-14
Identity = 51/198 (25.76%), Postives = 87/198 (43.94%), Query Frame = 1
Query:  175 YRSLFAKDGFPAPI-PGMESCWDVFRMAVERNPNNRMLGQREIVD--------GKA------GKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLG 723
            YRS+ + DG  + + PG ++   VF  A  +  N R+LG RE+++        GK       G+Y W +Y++V+       N ++  G + +    I+     EW+I  +AC       V LY TLG  A+   +  + V+     ++ +   LK        L+ I++    KP    E  K G+ V++      LG
Sbjct:   68 YRSVNSLDGLASVLYPGCDTLDKVFTYAKNKFKNKRLLGTREVLNEEDEVQPNGKIFKKVILGQYNWLSYEDVFVRAFNFGNGLQMLGQKPKTNIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHALNETEVTNIITSKELLQTKLKDIVSLVPRLRHIITVDG-KPPTWSEFPK-GIIVHTMAAVEALG 263          

HSP 2 Score: 36.5798 bits (83), Expect = 2.143e-14
Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = 3
Query:  759 NDICTIMYTSGTTGDPKGVMFQMRHCYFIAG 851
            +DI  IMYTSG+TG PKGVM  + H   IAG
Sbjct:  279 SDIAVIMYTSGSTGLPKGVM--ISHSNIIAG 307          
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: ACSL3_HUMAN (Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapiens GN=ACSL3 PE=1 SV=3)

HSP 1 Score: 63.5438 bits (153), Expect = 2.143e-14
Identity = 51/198 (25.76%), Postives = 87/198 (43.94%), Query Frame = 1
Query:  175 YRSLFAKDGFPAPI-PGMESCWDVFRMAVERNPNNRMLGQREIVD--------GKA------GKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLG 723
            YRS+ + DG  + + PG ++   VF  A  +  N R+LG RE+++        GK       G+Y W +Y++V+       N ++  G + +    I+     EW+I  +AC       V LY TLG  A+   +  + V+     ++ +   LK        L+ I++    KP    E  K G+ V++      LG
Sbjct:   68 YRSVNSLDGLASVLYPGCDTLDKVFTYAKNKFKNKRLLGTREVLNEEDEVQPNGKIFKKVILGQYNWLSYEDVFVRAFNFGNGLQMLGQKPKTNIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHALNETEVTNIITSKELLQTKLKDIVSLVPRLRHIITVDG-KPPTWSEFPK-GIIVHTMAAVEALG 263          

HSP 2 Score: 36.5798 bits (83), Expect = 2.143e-14
Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = 3
Query:  759 NDICTIMYTSGTTGDPKGVMFQMRHCYFIAG 851
            +DI  IMYTSG+TG PKGVM  + H   IAG
Sbjct:  279 SDIAVIMYTSGSTGLPKGVM--ISHSNIIAG 307          
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: ACBG2_RAT (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus norvegicus GN=Acsbg2 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.789e-14
Identity = 44/165 (26.67%), Postives = 79/165 (47.88%), Query Frame = 1
Query:  238 DVFRMAVERNPNNRMLGQREIVDGKAGKYVWKT--YKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVE-EKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLG 723
            ++F+ +VER       G    +  K GK  W T  + + YD+  K   ++   G++     GI G N  EW++        G  CV +Y T  A A +++I  + V++  VE ++++ ++L   P   E +K IV +       R  + +    +YSW +F++LG
Sbjct:   51 ELFQESVER------FGAYPALASKNGKK-WDTLTFSQYYDVCRKAARSLIKLGLQRFHGVGILGFNSVEWVVAALGAILAGGLCVGIYATNSAEACQYVIKQANVNVLIVENDQQLQKILSIPPDKMETVKAIVQY-------RLPLMENSTNLYSWQDFMELG 201          

HSP 2 Score: 38.1206 bits (87), Expect = 2.789e-14
Identity = 18/37 (48.65%), Postives = 22/37 (59.46%), Query Frame = 3
Query:  750 EKENDICTIMYTSGTTGDPKGVMFQMRHCYFIAGGNA 860
            +K N    I+YTSGTTG PKGVM    +  + AG  A
Sbjct:  216 QKANQCAVIIYTSGTTGSPKGVMLSHDNITWTAGAMA 252          
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: ACSL3_MOUSE (Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus GN=Acsl3 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.699e-14
Identity = 57/213 (26.76%), Postives = 92/213 (43.19%), Query Frame = 1
Query:  130 KAKEASGGRPSIGPVYRSLFAKDGFPAPI-PGMESCWDVFRMAVERNPNNRMLGQREIVD--------GKA------GKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLG 723
            KAK  S    S    YRS+ + DG  + + PG ++   VF  A  +  N R+LG REI++        GK       G Y W +Y++V+   +   N ++  G + +    I+     EW+I  +AC       V LY TLG  A+   +  + V+     ++ +   LK        L+ I++    KP    E  K G+ V++      LG
Sbjct:   56 KAKPVSSKPDS---AYRSINSVDGLASVLYPGCDTLDKVFMYAKNKFKNKRLLGTREILNEEDEIQPNGKIFKKVILGHYNWLSYEDVFIRALDFGNGLQMLGQKPKANIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHGLNETEVTNIITSKELLQTKLKEIVSLVPRLRHIITVDG-KPPTWSEFPK-GVIVHTMAAVQALG 263          

HSP 2 Score: 34.6538 bits (78), Expect = 4.699e-14
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:  759 NDICTIMYTSGTTGDPKGVM 818
            +DI  IMYTSG+TG PKGVM
Sbjct:  279 SDIAVIMYTSGSTGIPKGVM 298          
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.702e-14
Identity = 48/172 (27.91%), Postives = 84/172 (48.84%), Query Frame = 1
Query:  223 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGK--CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEML--KTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGR 726
            + + +D F+  ++ + N   LG R+        Y W +YKEV +L   + + +   G +   +   G++  N PEW+I  + C +  +  VPLYDTLGA A+ +I+  + +S+ F ++ +  ++L      K T  LK IV       +  E  +K G+ + S      LGR
Sbjct:   90 VRTMYDGFQRGIQVSNNGPCLGSRK----PNQPYEWISYKEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPCLKIIVIMDSYGSDLVERGKKCGVEIISLKALEDLGR 257          

HSP 2 Score: 30.8018 bits (68), Expect = 4.702e-14
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  762 DICTIMYTSGTTGDPKGVM 818
            D+  I +TSGTTG+PKG M
Sbjct:  270 DLAIICFTSGTTGNPKGAM 288          
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.031e-13
Identity = 46/172 (26.74%), Postives = 80/172 (46.51%), Query Frame = 1
Query:  226 ESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGK--CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEML--KTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGRD 729
            ++ ++VF+  +  + N   LG R+        Y W +YK+V D    + + +   G +       GI+  N PEW+I   AC    +  VPLYDTLGA A+ ++I  + +S+   +  +   ML        T  LKT++       +  +  EK G+ + S  +   LG++
Sbjct:   75 KTLYEVFQRGLAVSDNGPCLGYRK----PNQPYKWISYKQVSDRAEYLGSCLLHKGYKPSQDQFIGIFAQNRPEWVISELACYTYSMVAVPLYDTLGAEAIIYVINRADISVVICDTPQKATMLIENVEKDLTPGLKTVILMDPFDDDLMKRGEKCGIEMLSLHDAENLGKE 242          

HSP 2 Score: 32.7278 bits (73), Expect = 1.031e-13
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  762 DICTIMYTSGTTGDPKGVM 818
            D+  I +TSGTTGDPKG M
Sbjct:  254 DLSVICFTSGTTGDPKGAM 272          
BLAST of EY702988 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.339e-13
Identity = 51/171 (29.82%), Postives = 82/171 (47.95%), Query Frame = 1
Query:  235 WDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGK--CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEH-----LKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGR 726
            ++ F+  ++ + N   LG R+        Y W +YK+V +L   + +A+   G +       GI+  N PEW+I  + C A  +  VPLYDTLG  A+ +I+  + +S+ FV++   PE  K   +  E+     LK IV       E  E  ++ G+ V S      LGR
Sbjct:   93 YEGFQRGIQVSNNGPCLGSRK----PDQPYEWLSYKQVAELSECIGSALIQKGFKTAPDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDK---PEKAKLLLEGVENKLIPGLKIIVVMDAYGSELVERGQRCGVEVTSMKAMEDLGR 256          

HSP 2 Score: 31.9574 bits (71), Expect = 1.339e-13
Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  762 DICTIMYTSGTTGDPKGVMFQMRH 833
            D+  I +TSGTTG+PKG M   R+
Sbjct:  269 DLAVICFTSGTTGNPKGAMVTHRN 292          
The following BLAST results are available for this feature:
BLAST of EY702988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ACSL1_CAVPO5.179e-1731.98Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
FCSA_DICDI1.475e-1630.32Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]
FCSB_DICDI4.463e-1524.65Fatty acyl-CoA synthetase B OS=Dictyostelium disco... [more]
ACSL3_PONAB2.143e-1425.76Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abeli... [more]
ACSL3_HUMAN2.143e-1425.76Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapien... [more]
ACBG2_RAT2.789e-1426.67Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus... [more]
ACSL3_MOUSE4.699e-1426.76Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculu... [more]
ACSL1_MOUSE4.702e-1427.91Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
ACSL5_RAT1.031e-1326.74Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norv... [more]
ACSL1_HUMAN1.339e-1329.82Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-E10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702988 ID=EY702988; Name=EY702988; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGATTATTTAATGCCCGAGAGTCGAAAGAGCTGAAAATAAA
TTGAAAGAAAAAAAAATTAGAAAGAGGAGTTTTTGTGCGATCGAACATGA
GTAACATGAAATATGTTGTTGAAGTGGAGAAGGCGAAGGAGGCGAGCGGC
GGAAGGCCTTCGATAGGTCCGGTGTATCGGAGTCTTTTTGCTAAGGATGG
ATTTCCGGCTCCGATTCCGGGAATGGAGAGTTGTTGGGACGTTTTCCGCA
TGGCGGTGGAGAGAAATCCAAACAATCGGATGCTTGGTCAACGCGAGATT
GTAGATGGAAAGGCTGGTAAATATGTGTGGAAAACTTATAAAGAAGTATA
CGACTTGGTGATCAAAGTTGTAAATGCCATCCGCACTTGTGGTGTTGAGG
AAAGAGGAAAATGTGGTATTTACGGTGTCAATTGCCCAGAGTGGATTATC
GGCATGGAGGCTTGCAATGCTCTCGGCCTCCATTGTGTCCCTCTGTACGA
CACTTTAGGTGCTGGTGCTGTGGAGTTTATTATATGCCATTCAGGGGTTT
CAATTGCTTTTGTAGAGGAAAAAAAGATTCCTGAGATGCTTAAAACATTT
CCCAAGACCACAGAGCATTTAAAAACAATTGTGAGCTTTAGCAAGGTTAA
ACCTGAGCAGAGGGAAGAGATTGAGAAGTATGGTTTGGCTGTATATTCGT
GGGACGAATTTTTGCAACTGGGGAGAGATAAACAATTTGATCTACCTGTG
AAAAAGAAAATGACATCTGTACAATTATGTATACTAGTGGAACCACTGGT
GATCCAAAGGGAGTGATGTTTCAAATGAGACATTGTTACTTTATAGCTGG
AGGGAATGCCTTTGGAAGTGT
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