EY650361
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1_SOLLC (DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.358e-30 Identity = 63/79 (79.75%), Postives = 70/79 (88.61%), Query Frame = 2 Query: 629 QGLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 Q LLATGGGHLVYLEIGDG+L EVK+A+L+Y+ISCLDINPIGENP Y I AVGMWTDI +I+SLPDLNLITKE LGG Sbjct: 500 QVLLATGGGHLVYLEIGDGVLNEVKYAKLDYDISCLDINPIGENPNYSNIAAVGMWTDISVRIYSLPDLNLITKEQLGG 578 HSP 2 Score: 98.5969 bits (244), Expect = 4.842e-20 Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 6 SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVV 176 SQ QTLFCHDA+YNQLVQVTS SVRLVSSTSR+L+NEW +P GYSVNVATANA+QV+ Sbjct: 446 SQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLKNEWFAPVGYSVNVATANATQVL 502
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1_SOLCE (DNA damage-binding protein 1 OS=Solanum cheesmanii GN=DDB1 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.358e-30 Identity = 63/79 (79.75%), Postives = 70/79 (88.61%), Query Frame = 2 Query: 629 QGLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 Q LLATGGGHLVYLEIGDG+L EVK+A+L+Y+ISCLDINPIGENP Y I AVGMWTDI +I+SLPDLNLITKE LGG Sbjct: 505 QVLLATGGGHLVYLEIGDGVLNEVKYAKLDYDISCLDINPIGENPNYSNIAAVGMWTDISVRIYSLPDLNLITKEQLGG 583 HSP 2 Score: 98.5969 bits (244), Expect = 4.842e-20 Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 6 SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVV 176 SQ QTLFCHDA+YNQLVQVTS SVRLVSSTSR+L+NEW +P GYSVNVATANA+QV+ Sbjct: 451 SQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLKNEWFAPVGYSVNVATANATQVL 507
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1B_ARATH (DNA damage-binding protein 1b OS=Arabidopsis thaliana GN=DDB1B PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.502e-29 Identity = 62/79 (78.48%), Postives = 66/79 (83.54%), Query Frame = 2 Query: 629 QGLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 Q LLATGGGHLVYLEIGDG LTEVKH LEYE+SCLDINPIG+NP Y + AVGMWTDI +IF LPDL LITKE LGG Sbjct: 500 QVLLATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDNPNYSQLAAVGMWTDISVRIFVLPDLTLITKEELGG 578 HSP 2 Score: 97.8265 bits (242), Expect = 8.260e-20 Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 6 SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVV 176 S+ QTLFCHDA+YNQLVQVTS SVRLVSST+RELRN+W +P G+SVNVATANASQV+ Sbjct: 446 SEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWDAPAGFSVNVATANASQVL 502
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1A_ARATH (DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.502e-29 Identity = 62/79 (78.48%), Postives = 68/79 (86.08%), Query Frame = 2 Query: 629 QGLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 Q LLATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPIG+NP Y + AVGMWTDI +IFSLP+L LITKE LGG Sbjct: 500 QVLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIGDNPNYSQLAAVGMWTDISVRIFSLPELTLITKEQLGG 578 HSP 2 Score: 97.4413 bits (241), Expect = 1.079e-19 Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 6 SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVV 176 SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR+EW +P G++VNVATANASQV+ Sbjct: 446 SQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWHAPAGFTVNVATANASQVL 502
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1_XENLA (DNA damage-binding protein 1 OS=Xenopus laevis GN=ddb1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.668e-12 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 629 QGLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 Q LLA G L YLEI G L + ++E+E++CLD+ P+G N T + A+G+WTDI +I SLP L+ KE LGG Sbjct: 507 QVLLAVGRV-LYYLEIHPGELRQTSCTEMEHEVACLDVTPLGGNDTLSSLCAIGLWTDISARILSLPGFQLLHKEMLGG 584
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1_PONAB (DNA damage-binding protein 1 OS=Pongo abelii GN=DDB1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11 Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 650 GGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 G L YL+I L ++ H ++E+E++CLDI P+G++ + A+G+WTDI +I LP L+ KE LGG Sbjct: 513 GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 584
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1_MOUSE (DNA damage-binding protein 1 OS=Mus musculus GN=Ddb1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11 Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 650 GGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 G L YL+I L ++ H ++E+E++CLDI P+G++ + A+G+WTDI +I LP L+ KE LGG Sbjct: 513 GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 584
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1_HUMAN (DNA damage-binding protein 1 OS=Homo sapiens GN=DDB1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11 Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 650 GGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 G L YL+I L ++ H ++E+E++CLDI P+G++ + A+G+WTDI +I LP L+ KE LGG Sbjct: 513 GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 584
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1_CERAE (DNA damage-binding protein 1 OS=Cercopithecus aethiops GN=DDB1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11 Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 650 GGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 G L YL+I L ++ H ++E+E++CLDI P+G++ + A+G+WTDI +I LP L+ KE LGG Sbjct: 513 GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 584
BLAST of EY650361 vs. ExPASy Swiss-Prot
Match: DDB1_RAT (DNA damage-binding protein 1 OS=Rattus norvegicus GN=Ddb1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.409e-11 Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 650 GGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPTYXXITAVGMWTDIXGKIFSLPDLNLITKEHLGG 865 G L YL+I L ++ H ++E+E++CLD+ P+G++ + A+G+WTDI +I LP L+ KE LGG Sbjct: 513 GRALYYLQIHPQELRQISHTEMEHEVACLDVTPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 584 The following BLAST results are available for this feature:
BLAST of EY650361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY650361 ID=EY650361; Name=EY650361; organism=Citrus sinensis; type=EST; length=866bpback to top |