EY650360

Overview
NameEY650360
Unique NameEY650360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY650360 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.553e-13
Identity = 51/176 (28.98%), Postives = 78/176 (44.32%), Query Frame = 3 
Query:  135 VVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKAPA--XXXXXXXXXXXXXXXVLPCTHPLCKPRIVDFTLPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDT-----SEDKGILGMNLGRLSFASQAKISKFSYCVPTRVSRVGYTPTGSFYLGENPNS 641
            +++L IGTP Q    ++DTGS L W +C                        LPC+  LC+       L +    N  C Y+Y Y DG+  +G++  E  TF +  S   +  GC ++          G++GM  G LS  SQ  ++KFSYC    ++ +G +   +  LG   NS
Sbjct:   96 LMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQ------ALSSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGSV-SIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLDVTKFSYC----MTPIGSSTPSNLLLGSLANS 260
[Close]
BLAST of EY650360 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13
Identity = 45/153 (29.41%), Postives = 70/153 (45.75%), Query Frame = 3 
Query:  135 VVSLPIGTPPQTQEMVLDTGSQLSWIKCHK--KAPAXXXXXXXXXXXXXXXVLPCTHPLCKPRIVDFTLPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDT-----SEDKGILGMNLGRLSFASQAKISKFSYCV 572
            ++++ IGTP  +   ++DTGS L W +C    +  +                LPC    C+       LP++   N  C Y+Y Y DG+  +G +  E FTF  + S   +  GC +D          G++GM  G LS  SQ  + +FSYC+
Sbjct:   97 LMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQD------LPSETCNNNECQYTYGYGDGSTTQGYMATETFTFETS-SVPNIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQLGVGQFSYCM 242
The following BLAST results are available for this feature:
BLAST of EY650360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR1.553e-1328.98Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR2.648e-1329.41Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-B09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650360 ID=EY650360; Name=EY650360; organism=Citrus sinensis; type=EST; length=881bp
CCCACGCGTCCGCCCATGACGATTTGTCTCCGTCATATTACTCCTCTTTC
GTTTCGCAGACGAAACAAAACCGCAAAGTAGCGAGAGCTCCGTCTCTACG
CTATAGATCCAAGTTTAAATATTCAATGGCTCTTGTGGTGTCTCTCCCCA
TAGGGACTCCACCTCAGACTCAAGAGATGGTCTTAGACACCGGCAGCCAG
CTCTCCTGGATTAAGTGTCACAAGAAAGCCCCTGCTCCTCCCACGACGTC
CTTTGATCCTTCTCGTTCTTCTTCTTTCTCTGTTCTCCCCTGTACTCACC
CGCTTTGTAAGCCTCGGATCGTCGATTTTACCCTCCCCACCGATTGCGAC
CAGAACCGTTTGTGCCATTACTCTTACTTCTACGCAGATGGTACGTTCGC
CGAGGGTAATCTCGTCAAAGAAAAATTCACCTTCTCTGCTGCCCAGAGCA
CCCTTCCTTTGATTCTCGGCTGCGCTAAGGATACGAGCGAGGACAAGGGT
ATTCTGGGAATGAACCTTGGACGGTTGTCTTTCGCTTCCCAAGCGAAAAT
ATCCAAGTTCTCCTATTGTGTCCCGACCCGAGTGTCTCGAGTCGGGTACA
CACCAACCGGGTCGTTTTACCTTGGTGAGAACCCGAACTCAGCCGGGTTC
CGCTACGTCAGCTTCTTGACTTTCCCTCAAGTCAACGCTCTCCAAATTTG
GATCCTCTGGCGTACAGTGTTCCCATGCAAGGGGTTCGAATTCAGGCAAA
AGACTGGATATTCCACCACGGCTTTCCACCCGATGCTANCGGGTCCGGTC
ANACCATCGTCGATTCGGGATCCGATTCACTTACTTGGGGGACGTGGCTA
TATAAAATNAAGAGNAATCGTGAGCTCGCGG
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