EY702980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 286.574 bits (732), Expect = 1.225e-76 Identity = 143/203 (70.44%), Postives = 156/203 (76.85%), Query Frame = 3 Query: 57 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 MATSAIQQSAFAGQTAL+QSNE V K+G GGR++MRRTVKSAP SIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEILSKNG KFGE VWFKAG+QIFS+GGLDYLGNPN ++ Q+ L G + P G F+P GL + P Sbjct: 1 MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDP 203
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.728e-76 Identity = 137/170 (80.59%), Postives = 148/170 (87.06%), Query Frame = 3 Query: 57 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGL 566 MATSAI+QSAFAGQTAL+ NE VRK+G +GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNG KFGE VWFKAG+QIFS+GGLDYLGNPN ++ +Q+ L GL Sbjct: 1 MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGL 170
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.354e-75 Identity = 137/169 (81.07%), Postives = 145/169 (85.80%), Query Frame = 3 Query: 57 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWG 563 MATSAIQQSAFAGQTAL+ NE VRK+G GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNG FGE VWFKAG+QIFS+GGLDYLGNPN ++ AQ+ L G Sbjct: 1 MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMG 169
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.553e-74 Identity = 141/203 (69.46%), Postives = 157/203 (77.34%), Query Frame = 3 Query: 57 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 MA SAIQ SAFAGQTAL+Q +E VRKVGV+DG R +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+FPE+LSKNG +FGE VWFKAGAQIFS+GGLDYLGNPN ++ Q+ L GL + P G F+P GL + P Sbjct: 1 MAASAIQSSAFAGQTALKQRDELVRKVGVSDG-RFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDP 202
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 276.944 bits (707), Expect = 9.703e-74 Identity = 132/169 (78.11%), Postives = 145/169 (85.80%), Query Frame = 3 Query: 57 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWG 563 MATS IQQSAFAGQT L+ NE VRKVG +GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNG KFGE VWFKAG+QIF +GGLDYLGNPN ++ Q+ L G Sbjct: 1 MATSTIQQSAFAGQTLLKPQNELVRKVG-GNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMG 168
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.823e-73 Identity = 137/203 (67.49%), Postives = 151/203 (74.38%), Query Frame = 3 Query: 57 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 MATSAIQQSAF G+T LRQ NEF+RK G R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+L KNG KFGE VWFKAG+QIF++GGLDYLGNPN ++ Q+ L G + P G F+P GL + P Sbjct: 1 MATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDP 203
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 6.289e-73 Identity = 133/169 (78.70%), Postives = 141/169 (83.43%), Query Frame = 3 Query: 57 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWG 563 MAT AIQQSAF GQ + NEF+RKVG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNG KFGE VWFKAG+QIFS+GGLDYLGNPN ++ Q+ L G Sbjct: 1 MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 169
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.237e-70 Identity = 149/240 (62.08%), Postives = 167/240 (69.58%), Query Frame = 3 Query: 57 MAT-SAIQQSAFAGQTALR-QSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYPIIC--LN*REGAQKRLHG*SSMF*LFH*VLLLGRG 761 MAT SAIQ S+ AGQT LR Q NE V+KVG A RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNG KFGE VWFKAGAQIFS+GGLDY GNPN ++ Q+ L GL + P G F+P GL + P C L +E RL SMF F ++ G+G Sbjct: 1 MATASAIQSSSLAGQTLLRPQQNELVKKVGTAQA-RITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRL-AMFSMFGFFVQAIVTGKG 238
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 9.398e-69 Identity = 131/169 (77.51%), Postives = 142/169 (84.02%), Query Frame = 3 Query: 57 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWG 563 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNG KFGE VWFKAGAQIFS+GGLDYLGNPN ++ Q+ L G Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMG 167
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 9.398e-69 Identity = 131/169 (77.51%), Postives = 142/169 (84.02%), Query Frame = 3 Query: 57 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWG 563 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNG KFGE VWFKAGAQIFS+GGLDYLGNPN ++ Q+ L G Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMG 167 The following BLAST results are available for this feature:
BLAST of EY702980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702980 ID=EY702980; Name=EY702980; organism=Citrus sinensis; type=EST; length=856bpback to top |