EY650312

Overview
NameEY650312
Unique NameEY650312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: DNAJ1_ARATH (Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = -2
Query:  419 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSF-SFGDQYVHFNVSIPTNLTQRQRELIEEFAKE 634
            LGG + VPTL+G + L +  GTQP Q +VL+ KG+  +  F   GDQYV F V+ PT + +RQR ++EEFAKE
Sbjct:  314 LGGKVVVPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPTEVNERQRAILEEFAKE 386          
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = -2
Query:  407 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFAKEARGE 634
            LG  ++VPTLT  V +KV PGTQ G+ + L+ +G  +   ++ GDQ V   V +PT+LT RQ+EL+EEFAKE   E
Sbjct:  281 LGCELEVPTLTEKVNVKVTPGTQSGKVIKLQGQGFPSLQGYARGDQLVVLRVEVPTSLTDRQKELLEEFAKEGGEE 356          
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: MDJ1_SCHPO (DnaJ homolog 1, mitochondrial OS=Schizosaccharomyces pombe GN=mdj1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = -2
Query:  425 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFA 634
            LGGT++VPTLTG+V L+V PGT  G ++ +  KGI+  N+  +G+ YV+F V+IP  L+  +R L+E+ A
Sbjct:  382 LGGTLRVPTLTGNVDLRVSPGTSTGDRITMAGKGIRKVNTSRYGNFYVNFEVTIPKILSPHERSLLEQLA 451          
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMF (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = -2
Query:  410 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFAKEARG 634
            LGG ++VPTL G V L V   TQ G+++ +K KG+K+  S + GD Y H  V  P NLT RQ+EL+EEF + + G
Sbjct:  279 LGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNLTDRQKELLEEFERISTG 353          
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMB (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup B GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = -2
Query:  410 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFAKEARG 634
            LGG ++VPTL G V L V   TQ G+++ +K KG+K+  S + GD Y H  V  P NLT RQ+EL+EEF + + G
Sbjct:  279 LGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNLTDRQKELLEEFERISTG 353          
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMA (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup A GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = -2
Query:  410 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFAKEARG 634
            LGG ++VPTL G V L V   TQ G+++ +K KG+K+  S + GD Y H  V  P NLT RQ+EL+EEF + + G
Sbjct:  279 LGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNLTDRQKELLEEFERISTG 353          
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIM0 (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C (strain 053442) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = -2
Query:  410 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFAKEARG 634
            LGG ++VPTL G V L V   TQ G+++ +K KG+K+  S + GD Y H  V  P NLT RQ+EL+EEF + + G
Sbjct:  279 LGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNLTDRQKELLEEFERISTG 353          
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIG1 (Chaperone protein dnaJ OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = -2
Query:  410 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFAKEARG 634
            LGG ++VPTL G V L V   TQ G+++ +K KG+K+  S + GD Y H  V  P NLT RQ+EL+EEF + + G
Sbjct:  279 LGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNLTDRQKELLEEFERISTG 353          
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAW (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MW2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = -2
Query:  422 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFAK 634
            LG  I++PTL  +V+L +  GTQ G++  LK KGIK  + + +GD YV   V  PT LT RQ+EL++EFA+
Sbjct:  285 LGDEIKIPTLNNEVMLTIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQ 355          
BLAST of EY650312 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAU (Chaperone protein dnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = -2
Query:  422 LGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFAK 634
            LG  I++PTL  +V+L +  GTQ G++  LK KGIK  + + +GD YV   V  PT LT RQ+EL++EFA+
Sbjct:  285 LGDEIKIPTLNNEVMLTIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQ 355          
The following BLAST results are available for this feature:
BLAST of EY650312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
DNAJ1_ARATH2.062e-1350.68Chaperone protein dnaJ 1, mitochondrial OS=Arabido... [more]
DNAJ_PELCD1.023e-1248.68Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
MDJ1_SCHPO2.978e-1247.14DnaJ homolog 1, mitochondrial OS=Schizosaccharomyc... [more]
DNAJ_NEIMF2.978e-1248.00Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIMB2.978e-1248.00Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIMA2.978e-1248.00Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIM02.978e-1248.00Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIG12.978e-1248.00Chaperone protein dnaJ OS=Neisseria gonorrhoeae (s... [more]
DNAJ_STAAW5.079e-1247.89Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAU5.079e-1247.89Chaperone protein dnaJ OS=Staphylococcus aureus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-009-F07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650312 ID=EY650312; Name=EY650312; organism=Citrus sinensis; type=EST; length=890bp
CGAATAATGTTTTGTTTGCTTTCACTGGGCTTTGGAAGAAAATTTCACCA
AGTACACTCACATCTGTAATCTGTTCGTAAAAGATTAAATACAGCACAAT
TCACGTAAAGCATAAACAATAAAATAAATTTATATACAAAAGCTTCAATG
AGTTCAATGTCGTCGACTTTTGGCCTCAAATGATAAATACTGCTGTGATT
TTTGTGTAGAGATTCTACATAAGTTACAAATGAATAATAGGTCAAATGCA
ACTCAAAATTTCTCCTACAAAACTTCCGAAAGCAGGTAGGTTATTACTAA
CACCATCTCCTTTTCTTTCTACTTCCCTGCCACACCAAAGCAGGACCTAG
GATGATAGAATCCCAGTCTATCATCTTGATGCCCCTGCCGCAGCACGCTT
CTCATATTCACCTCGCGCTTCTTTAGCAAACTCTTCAATCAATTCCCGTT
GTCTCTGGGTCAGGTTCGTTGGAATGCTGACATTGAAGTGCACATATTGA
TCACCAAATGAGAAAGAGTTCCTTGTTTTAATCCCTTTGTTCTTCAGAAC
CACTTTCTGACCAGGTTGCGTTCCAGGGCGGACCTTGAGTACAACATCTC
CAGTGAGAGTTGGGACTTGAATAGTTCCTCCCAAATAGCCTGAGTGACAC
TTAAAACAGAATCACATGAATGTTAGCACCTTCTCTGCGGAAACTGGGTC
TTCCCTGACCTTGAGTGAACATAAAGATCNCAGGGTGATTTCATCAGGAT
CTGCTCCACACTTCTAAAACTTTATGTCTAATTGGTGGCACTNCTGGCAT
ATTATCAATTCACTGACCTTGATCCTTCATACTCTANCTCTTGNATGACT
GGCCCACTTCGGATAATTTGCCTGTTCCCCCATTGTCTGC
back to top