EY650307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 9.320e-79 Identity = 133/177 (75.14%), Postives = 152/177 (85.88%), Query Frame = 1 Query: 40 ISSATVATANRASLAHASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPGV 570 ISS+ +AT NR + AS+ APFTGLKS+ AFP TKK NND +S+ SNGGR QCMKVWPP GLKK+ETLSYLPPLSDEAL KEI+YLIR+ WIPCLEF LE G+VYREHH SPGYYDGRYWTMWKLPM+GCTD+ V+K+VGE KEYP++F+R+IGFDN RQVQCISFI AKPPGV Sbjct: 4 ISSSAIATVNRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPGV 180
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 6.041e-78 Identity = 138/180 (76.67%), Postives = 157/180 (87.22%), Query Frame = 1 Query: 25 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 564 MASSMISSATVAT +RA+ A A+MVAPFTGLKS++AFPAT+K+NNDITS+ASNGGR QCMKVWPP GL+KFETLSYLPPLS E+L K+I YLI GWIPCLEF LE +VYRE+++SPGYYDGRYW MWKLPM+GCTDAT VL ++ E K YP S +RIIGFDNKRQVQCISFIA KPP Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.758e-77 Identity = 138/182 (75.82%), Postives = 156/182 (85.71%), Query Frame = 1 Query: 25 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPGV 570 MA SMISSATVA +RAS A +SMVAPFT LKS+SAFP T+KTNNDITSIASNGGR QCM+VWPP GLKKFETLSYLPPLS E L KE++YL+R IPCLEF LE G+VYREH++SPGYYDGRYWTMWKLPM+GC D++ VLK++ E K YP +F+RIIGFDNKRQVQ ISFIA KPPGV Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPGV 182
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 4.329e-76 Identity = 137/183 (74.86%), Postives = 156/183 (85.25%), Query Frame = 1 Query: 25 MASSMISSATVAT--ANRASLAHASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 567 MASSMISS TVAT A+R + A A MVAPF GLKSSSAFP T+K+N DITSIASNGGR QCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEF LE G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTD++ VLK++ E K YP SF+RIIGFDN RQVQCISFIA KP G Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.260e-75 Identity = 137/183 (74.86%), Postives = 156/183 (85.25%), Query Frame = 1 Query: 25 MASSMISSATVAT--ANRASLAHASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 567 MASSMISS TVAT A+R + A A MVAPFTGLKSSSA P T+K+N DITSIASNGGR QCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEF LE G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTD++ VLK++ E K YP SF+RIIGFDN RQVQCISFIA KP G Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.806e-75 Identity = 129/176 (73.30%), Postives = 150/176 (85.23%), Query Frame = 1 Query: 34 SMISSATVATANRASLAHASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKP 561 ++ISSA V T NRAS A A++VAPFTGLKSS+ FP TKKTNNDITSIASNGGR CM+VWPP G KKFETLSYLPPL++E L KE+ YLIR GWIPCLEF LEKG+VYRE+H+SPGYYDGRYWTMW+LP++G TD++ VLK++ + EYP SF+RIIGFDN RQVQCISFIA P Sbjct: 2 ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 3.665e-75 Identity = 130/181 (71.82%), Postives = 150/181 (82.87%), Query Frame = 1 Query: 25 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 567 MASSM+S+ATVA+ NR S A A+MVAPFTGLKS+ FP T+KTN+DITSI SNGG+ QCMKVWP G+KKFETLSYLPPL+ E L E+ YL+RSGWIPCLEF LE G VYREH + PGYYDGRYWTMWKLPM+GCTDA VLK++ E+ K +P + RIIGFDN RQVQCISF+A KPPG Sbjct: 1 MASSMLSTATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 1.066e-74 Identity = 131/181 (72.38%), Postives = 150/181 (82.87%), Query Frame = 1 Query: 25 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 567 MASSM+S+A VA NRAS A ASMVAPFTGLKS+SAFP T+KT DITSIASNGGR QCM+VWPP G K +ETLSYLPPL+ E L KE+ YL+R GW+PCLEF LE G VYRE+H+SPGYYDGRYWTMWKLPM+GCTDA VL+++ E+ K YP + RIIGFDN RQVQCISF+A KP G Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 2.376e-74 Identity = 131/182 (71.98%), Postives = 156/182 (85.71%), Query Frame = 1 Query: 25 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 567 MASS++SSA VAT R+++A ASMVAPFTGLKS+++FP TKK NN DITS+ASNGGR +CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEF E G+VYRE+HKSPGYYDGRYWTMWKLPM+GCTDAT VL +V E K YP +++RIIGFDN RQVQCISFIA KP G Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY650307 vs. ExPASy Swiss-Prot
Match: RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 1.540e-73 Identity = 132/180 (73.33%), Postives = 149/180 (82.78%), Query Frame = 1 Query: 25 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRFQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFXLEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATHVLKDVGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 564 MASSM+SSA V T S A A+MVAPFTGLKSS+AFP T+KTN DITSIASNGGR CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EF LE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ VLK+V E KEYP +F+RIIGFDN RQVQCISFIA KPP Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176 The following BLAST results are available for this feature:
BLAST of EY650307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650307 ID=EY650307; Name=EY650307; organism=Citrus sinensis; type=EST; length=967bpback to top |