EY650306

Overview
NameEY650306
Unique NameEY650306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2BB_DICDI (Translation initiation factor eIF-2B subunit beta OS=Dictyostelium discoideum GN=eif2b2 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.886e-27
Identity = 69/141 (48.94%), Postives = 86/141 (60.99%), Query Frame = 1
Query:  337 QGHLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLNXVRSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAG 759
            +G   A  L    + TTLITDSAVFAM+SRVN VI+G HAVMANGG+IA  G + +A+AA  H+VP VV  G +KLCPLY ++ ++  N   SP E L F E     +          H  NP FDYV P L S+FIT+ G
Sbjct:  234 EGQKTAISLSKASIDTTLITDSAVFAMMSRVNKVIIGTHAVMANGGLIATSGTHTLAVAAKYHSVPIVVCTGLYKLCPLYAYDQDT-FNNFGSPGEYLKFEEAEFLEN---------VHSYNPTFDYVAPDLVSLFITNIG 364          

HSP 2 Score: 21.9422 bits (45), Expect = 4.886e-27
Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  756 GMHNPSYMVSVMADY 800
            G HNPSY+  ++ +Y
Sbjct:  364 GGHNPSYIYRLLQEY 378          
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2BB_SCHPO (Probable translation initiation factor eIF-2B subunit beta OS=Schizosaccharomyces pombe GN=tif222 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.573e-24
Identity = 57/139 (41.01%), Postives = 87/139 (62.59%), Query Frame = 1
Query:  343 HLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLNXVRSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAG 759
            H +AK L    + TT+I+D+ +FA++SRVN VI+G HA++ NGG++   G  LVA AA  HA P VV +G +KL P+YP++ ES++  + SP +++ F E         G       ++NP +DY+PP L  +FIT+ G
Sbjct:  243 HAMAKRLAQAGIDTTVISDATIFAIMSRVNKVILGTHAILGNGGLVTYSGAQLVAQAARHHATPVVVCSGIYKLSPVYPYDLESIIQ-LSSPDKIMSFNE---------GDLISRAEILNPYYDYIPPDLVDLFITNLG 371          
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2BB_TAKRU (Translation initiation factor eIF-2B subunit beta OS=Takifugu rubripes GN=eif2b2 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.079e-21
Identity = 59/141 (41.84%), Postives = 82/141 (58.16%), Query Frame = 1
Query:  337 QGHLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLNXVRSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAG 759
            QGH +A  L    + TT+I D+A+FA++SRVN VI+G   V+ANGG+ A  G + +ALAA  H+ P +V A   KL P +P N E   +   SP E+L F E         G      +V  P FDYVPP+L ++FI++ G
Sbjct:  203 QGHKMATSLSTAGIETTVIADAAIFAVMSRVNKVIIGTQTVLANGGLRAVNGTHTLALAAKHHSTPLIVCAPMFKLSPQFP-NEEDTFHKFVSPHEVLPFTE---------GEILSKVNVHCPVFDYVPPELITLFISNIG 333          
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2BB_HUMAN (Translation initiation factor eIF-2B subunit beta OS=Homo sapiens GN=EIF2B2 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 6.839e-20
Identity = 58/150 (38.67%), Postives = 84/150 (56.00%), Query Frame = 1
Query:  337 QGHLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLNXVRSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAGCTIXHTWYR 786
            QGH +A  L    + TT++TD+A+FA++SRVN VI+G   ++ANG + A  G + +ALAA  H+ P +V A   KL P +P+  +S    V +P E+L F E         G       V  P FDYVPP+L ++FI++ G       YR
Sbjct:  199 QGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFV-APEEVLPFTE---------GDILEKVSVHCPVFDYVPPELITLFISNIGGNAPSYIYR 338          
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2BB_BOVIN (Translation initiation factor eIF-2B subunit beta OS=Bos taurus GN=EIF2B2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.839e-20
Identity = 58/150 (38.67%), Postives = 84/150 (56.00%), Query Frame = 1
Query:  337 QGHLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLNXVRSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAGCTIXHTWYR 786
            QGH +A  L    + TT++TD+A+FA++SRVN VI+G   ++ANG + A  G + +ALAA  H+ P +V A   KL P +P+  +S    V +P E+L F E         G       V  P FDYVPP+L ++FI++ G       YR
Sbjct:  199 QGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVAGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFV-APEEVLPFTE---------GDILEKVSVHCPVFDYVPPELITLFISNIGGNAPSYIYR 338          
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2BB_RABIT (Translation initiation factor eIF-2B subunit beta OS=Oryctolagus cuniculus GN=EIF2B2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.932e-20
Identity = 57/150 (38.00%), Postives = 83/150 (55.33%), Query Frame = 1
Query:  337 QGHLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLNXVRSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAGCTIXHTWYR 786
            QGH +A  L    + TT++TD+A+FA++SRVN VI+G   ++ANG + A  G + +ALAA  H+ P +V A   KL P +P+  +S    V +P E+L F E       G            P FDYVPP+L ++FI++ G       YR
Sbjct:  199 QGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFV-APEEVLPFTEGDILDKVGCHC---------PVFDYVPPELITLFISNIGGNAPSYIYR 338          
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2BB_MOUSE (Translation initiation factor eIF-2B subunit beta OS=Mus musculus GN=Eif2b2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.524e-19
Identity = 58/150 (38.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  337 QGHLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLNXVRSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAGCTIXHTWYR 786
            QGH +A  L    + TT++TD+A+FA++SRVN VI+G   ++ANG + A  G + +ALAA  H+ P +V A   KL P +P   +S    V +P E+L F E         G       V  P FDYVPP L ++FI++ G       YR
Sbjct:  199 QGHEMAVNLSKEGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGSLRAVAGTHTLALAAKHHSTPLIVCAPMFKLSPQFPSEEDSFHKFV-APEEVLPFTE---------GDILEKVSVHCPVFDYVPPDLITLFISNIGGNAPSYIYR 338          
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2BB_RAT (Translation initiation factor eIF-2B subunit beta OS=Rattus norvegicus GN=Eif2b2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.990e-19
Identity = 58/150 (38.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  337 QGHLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLNXVRSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAGCTIXHTWYR 786
            QGH +A  L    + TT++TD+A+FA++SRVN VI+G   ++ANG + A  G + +ALAA  H+ P +V A   KL P +P   +S    V +P E+L F E         G       V  P FDYVPP L ++FI++ G       YR
Sbjct:  199 QGHEMAVNLSEAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGSLRAVAGTHTLALAAKHHSTPLIVCAPMFKLSPQFPSEEDSFHKFV-APEEVLPFTE---------GDILEKVSVHCPVFDYVPPDLITLFISNIGGNAPSYVYR 338          
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2B2_METJA (Putative translation initiation factor eIF-2B subunit 2 OS=Methanocaldococcus jannaschii GN=MJ0122 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.570e-14
Identity = 52/156 (33.33%), Postives = 79/156 (50.64%), Query Frame = 1
Query:  307 LFCYFLFYRYQGHLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLNXV-----RSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAG 759
            +FC     R QG+L AK L    +  TLI DSAV   I  +++V+VGA A+ ANG ++  +G + +AL A++  VPF+  A ++K       +P++++  +     RSP E+  F       D   G       + NPAFD  P K     IT+ G
Sbjct:  150 VFCTETRPRNQGYLTAKTLYDYGIDVTLIVDSAVRYFIKEIDIVVVGADAITANGCLVNKIGTSQIALIANESRVPFLTAAETYKF------HPKTIVGELIEIEERSPEEVAVF------EDKYKG-----IKIRNPAFDVTPAKYIDAIITEVG 288          

HSP 2 Score: 25.0238 bits (53), Expect = 8.570e-14
Identity = 11/36 (30.56%), Postives = 18/36 (50.00%), Query Frame = 3
Query:   84 EVILTLCSSRTVLEFLFAAKGKKRSFRVFVAEGAPR 191
            + ILT C+S   +  +  A  + +  +VF  E  PR
Sbjct:  123 DTILTHCNSEAAISVIKTAYDEGKDIKVFCTETRPR 158          
BLAST of EY650306 vs. ExPASy Swiss-Prot
Match: EI2B2_ARCFU (Putative translation initiation factor eIF-2B subunit 2 OS=Archaeoglobus fulgidus GN=AF_2037 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.116e-13
Identity = 51/147 (34.69%), Postives = 71/147 (48.30%), Query Frame = 1
Query:  331 RYQGHLLAKELVARCLHTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGMNLVALAAHKHAVPFVVLAGSHKLCPLYPHNPESLLN----XVRSPSELLDFGEFSXCMDFGSGSGSPLXHVVNPAFDYVPPKLXSVFITDAG 759
            R+QGHL  K+L    +  TLI DSAV   I+ V+ V+VGA  + ANG +I  +G + +ALAA +  VPF+V A ++K  P        ++        +P E+L  G                  V NPAFD  P     V IT+ G
Sbjct:  150 RWQGHLTVKQLREAGIEVTLIVDSAVRYFINEVDCVVVGADTITANGALINKIGTSQIALAAKEARVPFMVAAETYKFSPKTLFGELVVIEERDAREVAPEEILKLG----------------VKVRNPAFDVTPRDYIDVIITEIG 280          

HSP 2 Score: 20.7866 bits (42), Expect = 4.116e-13
Identity = 10/41 (24.39%), Postives = 17/41 (41.46%), Query Frame = 3
Query:   90 ILTLCSSRTVLEFLFAAKGKKRSFRVFVAEGAPRFVQWLAI 212
            ++T C+S   L  +  A    +   V   E  PR+   L +
Sbjct:  117 VMTHCNSSAALSVIKKAHENGKRVEVIATESRPRWQGHLTV 157          
The following BLAST results are available for this feature:
BLAST of EY650306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
EI2BB_DICDI4.886e-2748.94Translation initiation factor eIF-2B subunit beta ... [more]
EI2BB_SCHPO1.573e-2441.01Probable translation initiation factor eIF-2B subu... [more]
EI2BB_TAKRU8.079e-2141.84Translation initiation factor eIF-2B subunit beta ... [more]
EI2BB_HUMAN6.839e-2038.67Translation initiation factor eIF-2B subunit beta ... [more]
EI2BB_BOVIN6.839e-2038.67Translation initiation factor eIF-2B subunit beta ... [more]
EI2BB_RABIT8.932e-2038.00Translation initiation factor eIF-2B subunit beta ... [more]
EI2BB_MOUSE1.524e-1938.67Translation initiation factor eIF-2B subunit beta ... [more]
EI2BB_RAT1.990e-1938.67Translation initiation factor eIF-2B subunit beta ... [more]
EI2B2_METJA8.570e-1433.33Putative translation initiation factor eIF-2B subu... [more]
EI2B2_ARCFU4.116e-1334.69Putative translation initiation factor eIF-2B subu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-009-F01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650306 ID=EY650306; Name=EY650306; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGAAATTCTTCATCTATGTTTCTTCCTACCATTTGCTACTT
CCATTAATTTTATCTATTAAATGTATTTTCAGTGAGGTAATATTAACTTT
ATGCAGTTCAAGGACGGTGTTGGAATTTCTTTTTGCTGCAAAGGGGAAAA
AAAGATCATTCCGGGTATTTGTTGCAGAGGGTGCTCCAAGGTTTGTGCAA
TGGCTTGCTATTTGTTGATTGCAAAGAAATATTTCACTGGCTACTTTGGC
TCTGATGTTCTCTCTCTCTCTCTCTCTCTCTCTCTATCACATTCTCTGTT
TGGTTGCTGTTCTGCTACTTCTTGTTTTATAGGTATCAGGGGCATCTGCT
TGCAAAAGAATTGGTAGCAAGATGTTTACACACCACACTGATTACTGATT
CTGCAGTTTTTGCCATGATTTCCCGAGTAAACATGGTTATAGTTGGAGCT
CATGCTGTCATGGCCAATGGTGGGGTTATAGCACCTGTTGGGATGAATTT
GGTTGCACTTGCAGCTCATAAGCATGCTGTCCCTTTTGTTGTACTTGCCG
GAAGTCACAAGTTATGCCCCCTCTATCCGCACAATCCTGAAAGTTTACTG
AATGANGTGAGATCCCCATCAGAGCTGCTGGACTTTGGAGAATTCTCANA
CTGCATGGATTTTGGGAGTGGCAGTGGTTCCCCTCTTNCTCATGTGGTCA
ATCCAGCATTTGACTATGTTCCACCGAAACTTNGTAGTGTTTTTATTACT
GACGCGGGATGCACAATCCNTCATACATGGTATCGGTGATGGCTGATTAT
ACTCGGCTGATGATTGGGTGTGCACCGAAAACTACTGCTGGGAATTNCTN
CTTTGTTGGGGTGNATGTGTNCTCACTTTTCGATTGATTAATGTTTATCA
TGCAAACC
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