EY650304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650304 vs. ExPASy Swiss-Prot
Match: COG5_MOUSE (Conserved oligomeric Golgi complex subunit 5 OS=Mus musculus GN=Cog5 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.141e-25 Identity = 59/177 (33.33%), Postives = 93/177 (52.54%), Query Frame = 2 Query: 2 TRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMDAAM-DNNASPYMEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIF 529 T++ + + A + + +L TI+ + +++ L ++ D +E+ I+ +H ++FS + D S YM+ELQ I +++ + TE I A R + FIR+ASL+RPL E GKLR+A D A++ELAVG V LG YR LR+FRPL+F Sbjct: 561 TKVVASQSSFSATAEQTIMSALKTIHDLMGNAIQPLLTSVADAIEAIIITMHQEDFSGASSSSGKPDVPCSLYMKELQGFIARVMNDYFKHF--ECMDFVFDNTEAI--------AQRAIELFIRNASLIRPLGEGGKLRLAADFAQMELAVGPLCRRVSDLGKSYRMLRSFRPLLF 727 HSP 2 Score: 45.8246 bits (107), Expect = 1.141e-25 Identity = 28/94 (29.79%), Postives = 47/94 (50.00%), Query Frame = 1 Query: 526 FLGTSQLGASPLLQDLPP-SVILHHLYSRGPDELQSPLQKNKLTPLQYSLWLDSQ-GEDXIWKGIKATLDDYXXXXXXXXXXXVXPVYSLMLQL 801 F + + SP + D+ P S+I+ L++R P EL+SP Q+ + + ++S WLD E ++ L+ Y PVY +M+QL Sbjct: 727 FQTSEHVADSPAVGDIIPFSIIIQFLFTRAPAELKSPFQRAEWSHARFSQWLDDHPSEKDRLLLLRGALEAYVQSVRSRDGKEFAPVYPIMVQL 820
BLAST of EY650304 vs. ExPASy Swiss-Prot
Match: COG5_HUMAN (Conserved oligomeric Golgi complex subunit 5 OS=Homo sapiens GN=COG5 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17 Identity = 63/176 (35.80%), Postives = 90/176 (51.14%), Query Frame = 2 Query: 74 IYGVACDSVTSLFQAMIDGLESCILQIHDQNFS-VLGMDAAMDNNASPYMEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLEHLSWEHLLFFKIFHQVLYFTI 598 I+ + ++V L ++ D +E+ I+ +H ++FS L D S YM+ELQ I S++ + TE I R V FIRHASL+RPL E GK+R+A D A++ELAVG V LG YR LR+FRPL+F + EH+ V+ F+I Sbjct: 595 IHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVPCSLYMKELQGFIARVMSDYFKHF--ECLDFVFDNTEAIAQRAVE--------LFIRHASLIRPLGEGGKMRLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLF---QASEHVASSPALGDVIPFSI 757 The following BLAST results are available for this feature:
BLAST of EY650304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY650304 ID=EY650304; Name=EY650304; organism=Citrus sinensis; type=EST; length=925bpback to top |