EY650296

Overview
NameEY650296
Unique NameEY650296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6968 contig Csv1_Contig6968:1..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY650296 vs. ExPASy Swiss-Prot
Match: HBP1C_WHEAT (Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.340e-34
Identity = 93/220 (42.27%), Postives = 128/220 (58.18%), Query Frame = 2
Query:   80 NTIYSSRILELRAQDQSFGIHMENAVDLSRNSVFYQMKTGNQAVGTD-VQFGTLSKTLASSDINLSSHI------VGSQSMPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTD---DTEDKNQRFERGQLTAVAAXXXXXXXXXXXGDQKTLRRLAHNREAARISRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIXHFQSGDQSHSMSGHG 709
            N +  SR+ +L A   S G  +E+  + S N++F  +K    A  +D +QFG   K+++ +D+  ++        V  Q++  QK  Q NL+++ + + +NWGES+MA+ SP TDTSTD   D +++NQ FE+GQL A  A            D K+LRRLA NREAAR SRLRKKAY+Q LESSRLKLT            GI    SGDQS S SG+G
Sbjct:   38 NVMQPSRVADLGALAHSAGFRIEDLANFSTNNLF-NLKPNTHAYTSDPLQFGNYGKSISPTDLATTAAAAAAVTAVDPQALLQQKGVQPNLVALRTHNNDNWGESSMADTSPRTDTSTDPDIDIDERNQMFEQGQLAAPTASDSSDKSRDKL-DHKSLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQELQRARQQGIFISSSGDQSQSASGNG 255          
BLAST of EY650296 vs. ExPASy Swiss-Prot
Match: TGA21_TOBAC (TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.528e-33
Identity = 92/213 (43.19%), Postives = 122/213 (57.28%), Query Frame = 2
Query:   74 EGNTIYSSRILELRAQDQSFGIHMENAVDLSRNSVFYQMKTGNQAVGTDVQFGTLSKTLASSDINLSSHIVGSQSMPLQKEPQSNLISVSSGHRENWGESNMAEASPITDTSTD-DTEDKNQRFERGQLTAVAAXXXXXXXXXXXGDQKTLRRLAHNREAARISRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIXHFQSGDQSHSMSGHG 709
            E N   +SR+ +    +Q  G  + +  +++R+ +F      N AVG +V  GT+++TLA S+ +L +    SQ+M LQ    SNL+S S  H ENWGESNMA++   TDTSTD D +DKNQ  E GQ +  +             DQKTLRRLA NREAAR SRLRKKAYVQQLE+SRLKL+            G       DQS+ +  +G
Sbjct:   33 EANNTNTSRMSDFGVLEQYLGFRIGDGANVNRSPLFNSTSATNPAVGFEVS-GTINRTLAPSNTSLPTATPRSQTMLLQ----SNLVSASGTHHENWGESNMADSGSRTDTSTDMDGDDKNQLIEAGQSSDKSKEKVL--------DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQDLQRARQQGKYISNIADQSNGVGANG 232          
BLAST of EY650296 vs. ExPASy Swiss-Prot
Match: HBP1B_WHEAT (Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.537e-22
Identity = 63/111 (56.76%), Postives = 68/111 (61.26%), Query Frame = 2
Query:  377 MAEASPITDTSTDDTEDKNQRFERGQLTAVAAXXXXXXXXXXXGDQKTLRRLAHNREAARISRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIXHFQSGDQSHSMSGHG 709
            MAEASP T+TSTDDT D+N   E G                  GDQKT+RRLA NREAAR SRLRKKAYVQQLE+SRLKLT            GI    S DQSHSMSG+G
Sbjct:    1 MAEASPRTETSTDDT-DENLMLEPGNAALAVVSDSSDRSRDKNGDQKTMRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGIFISSSADQSHSMSGNG 110          
BLAST of EY650296 vs. ExPASy Swiss-Prot
Match: TGA2_ARATH (Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.297e-18
Identity = 57/111 (51.35%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  377 MAEASPITDTSTDDTEDKNQRFERGQLTAVAAXXXXXXXXXXXGDQKTLRRLAHNREAARISRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIXHFQSGDQSHSMSGHG 709
            MA+ SP TD STDD  D       G L   AA            DQKTLRRLA NREAAR SRLRKKAYVQQLE+SRLKLT            G+    +GDQ+HS  G+G
Sbjct:    1 MADTSPRTDVSTDDDTDHPDLGSEGALVNTAASDSSDRSKGKM-DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISGTGDQAHSTGGNG 110          
BLAST of EY650296 vs. ExPASy Swiss-Prot
Match: TGA6_ARATH (Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 3.000e-18
Identity = 57/112 (50.89%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  377 MAEASPITDTSTD-DTEDKNQRFERGQLTAVAAXXXXXXXXXXXGDQKTLRRLAHNREAARISRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIXHFQSGDQSHSMSGHG 709
            MA+ S  TD STD DT+ ++   +RG + A A+            DQKTLRRLA NREAAR SRLRKKAYVQQLE+SRLKLT            G+    SGDQ+HS  G+G
Sbjct:    1 MADTSSRTDVSTDGDTDHRDLGSDRGHMHAAASDSSDRSKDKL--DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHSTGGNG 110          
BLAST of EY650296 vs. ExPASy Swiss-Prot
Match: TGA5_ARATH (Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 3.000e-18
Identity = 59/123 (47.97%), Postives = 70/123 (56.91%), Query Frame = 2
Query:  377 MAEASPITDTSTD-DTEDKNQRFERGQLTAVAAXXXXXXXXXXXGDQKTLRRLAHNREAARISRLRKKAYVQQLESSRLKLTXXXXXXXXXXXXGIXHFQSGDQSHSMSGHGI*NSLTFTIGY 742
            M + SP T  STD DT+  N  F+ G L   A+            DQKTLRRLA NREAAR SRLRKKAYVQQLE+SRLKLT            G+    SGDQ+HS +G G   ++ F + Y
Sbjct:    1 MGDTSPRTSVSTDGDTDHNNLMFDEGHLGIGASDSSDRSKSKM--DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHSTAGDG---AMAFDVEY 118          
The following BLAST results are available for this feature:
BLAST of EY650296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
HBP1C_WHEAT1.340e-3442.27Transcription factor HBP-1b(c1) (Fragment) OS=Trit... [more]
TGA21_TOBAC2.528e-3343.19TGACG-sequence-specific DNA-binding protein TGA-2.... [more]
HBP1B_WHEAT1.537e-2256.76Transcription factor HBP-1b(c38) OS=Triticum aesti... [more]
TGA2_ARATH2.297e-1851.35Transcription factor TGA2 OS=Arabidopsis thaliana ... [more]
TGA6_ARATH3.000e-1850.89Transcription factor TGA6 OS=Arabidopsis thaliana ... [more]
TGA5_ARATH3.000e-1847.97Transcription factor TGA5 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-009-E03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650296 ID=EY650296; Name=EY650296; organism=Citrus sinensis; type=EST; length=937bp
CCACGCGTCCGCTCGATTCATTCAGTGTTATTTTCCTTCATAATGATTTT
ACTGTCAGCTTAAGAGTGACCCAGAAGGAAACACTATTTACTCTTCTCGA
ATTCTGGAACTCAGAGCACAAGATCAATCTTTTGGAATTCACATGGAGAA
TGCTGTTGACCTTAGCAGAAATAGTGTATTTTATCAAATGAAGACAGGTA
ACCAGGCAGTAGGAACTGATGTCCAATTTGGCACCTTGAGTAAGACACTT
GCCTCCTCAGATATAAACCTTTCGTCACATATTGTGGGGTCCCAGTCAAT
GCCACTACAAAAAGAACCTCAATCGAATTTGATTTCTGTATCTAGTGGTC
ATCGAGAGAACTGGGGGGAGTCCAACATGGCAGAAGCCAGTCCAATAACT
GATACGTCAACAGATGATACAGAAGATAAAAATCAAAGGTTTGAAAGAGG
TCAATTGACAGCTGTTGCAGCTTCTGATTCTAGTGACAAATCAAAAGATA
AATCAGGGGATCAGAAGACGTTACGCCGGCTTGCTCATAATCGTGAGGCT
GCCAGGATAAGCCGGTTACGGAAAAAGGCATATGTNCAACAACTGGAGAG
CAGTCGGCTTAAACTTACTCAACTAGAGCAAGAGCTCCAGCGTGCTCGCC
AGCAGGGTATATTNCATTTCCAGTCAGGAGATCAATCCCATTCAATGAGC
GGGCATGGTATTTAAAACTCACTTACCTTTACTATTGGTTATAATNNTGT
TAACAGTCTGGAAACTGATCAAGGCGATGATCTGTGACTTTTTAATGGTC
TGCCGATATGTTCTGTGAGATCTGTGAGATCCAAGGAAGCCTTTAAAGTC
TGCTGCACATCAAAGTGCTTGGTATATTATATGGATCAAATTCTGCTGCT
GAGCTAATTACTGGCAGCACATTGATGAAATATTCTC
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