EY702956

Overview
NameEY702956
Unique NameEY702956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702956 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.515e-24
Identity = 56/89 (62.92%), Postives = 64/89 (71.91%), Query Frame = 3
Query:   12 VSVVLRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGXQPGXVLXWMTRVRXAXDXXRGLEXLXEKGXXXLYPEISH 278
            VS+V RLKH+N V+LLGYCV+GN R+L+YEFA  GSLHDILHGRKGV+G QPG VL W  RV+ A    RGLE L EK      P I H
Sbjct:  117 VSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKAN----PHIIH 201          
BLAST of EY702956 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23
Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 3
Query:    3 TRPVSVVLRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGXQPGXVLXWMTRVRXAXDXXRGLEXLXEKGXXXLYPEISH 278
            T  +SVV RLKH++ VELLGYC+E N R+L Y+FAT GSLHD+LHGRKGVQG +PG VL W  RV+ A    +GLE L EK    + P I H
Sbjct:  115 TSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEK----VQPPIVH 202          
BLAST of EY702956 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23
Identity = 56/89 (62.92%), Postives = 63/89 (70.79%), Query Frame = 3
Query:   12 VSVVLRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGXQPGXVLXWMTRVRXAXDXXRGLEXLXEKGXXXLYPEISH 278
            VS+V RLK EN+VELLGYCV+G  RVLAYE+A  GSLHDILHGRKGV+G QPG VL W  RV+ A    +GLE L EK      P I H
Sbjct:  112 VSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKA----QPHIIH 196          
BLAST of EY702956 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 4.755e-15
Identity = 34/89 (38.20%), Postives = 46/89 (51.69%), Query Frame = 3
Query:   12 VSVVLRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGXQPGXVLXWMTRVRXAXDXXRGLEXLXEKGXXXLYPEISH 278
            V V+ R++H+NLV LLGYCVEG  R+L Y+F   G+L   +HG  G         L W  R+       +GL  L E     L P++ H
Sbjct:  199 VEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSP-----LTWDIRMNIILGMAKGLAYLHE----GLEPKVVH 278          

HSP 2 Score: 45.0542 bits (105), Expect = 4.755e-15
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 1
Query:  388 TLGHPAPQYRMTGQLTHKRDAHSSGAVLQELFTGRKPVD 504
            T G+ AP+Y  TG L  K D +S G ++ E+ TGR PVD
Sbjct:  319 TFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVD 357          
BLAST of EY702956 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 4.060e-13
Identity = 30/89 (33.71%), Postives = 44/89 (49.44%), Query Frame = 3
Query:   12 VSVVLRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGXQPGXVLXWMTRVRXAXDXXRGLEXLXEKGXXXLYPEISH 278
            V  +  ++H+NLV LLGYC+EG  R+L YE+   G+L   LHG     G      L W  R++      + L  L E     + P++ H
Sbjct:  228 VEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGN-----LTWEARMKIITGTAQALAYLHE----AIEPKVVH 307          

HSP 2 Score: 42.743 bits (99), Expect = 4.060e-13
Identity = 20/39 (51.28%), Postives = 24/39 (61.54%), Query Frame = 1
Query:  388 TLGHPAPQYRMTGQLTHKRDAHSSGAVLQELFTGRKPVD 504
            T G+ AP+Y  TG L  K D +S G +L E  TGR PVD
Sbjct:  348 TFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVD 386          
BLAST of EY702956 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.138e-12
Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 3
Query:   12 VSVVLRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGXQPGXVLXWMTRVRXAXDXXRGLEXL 236
            V ++LR+ H+NLV L+GYC EG+   L YE+   G L + + G++G      G +L W TR++ A +  +GLE L
Sbjct:  622 VELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRG------GSILNWGTRLKIALEAAQGLEYL 690          

HSP 2 Score: 33.8834 bits (76), Expect = 1.138e-12
Identity = 20/60 (33.33%), Postives = 28/60 (46.67%), Query Frame = 1
Query:  334 SHSRP*DGTPLYFIPAPRTLGHPAPQYRMTGQLTHKRDAHSSGAVLQELFTGRKPVDPLR 513
            S S P +G          T+G+  P+Y  T  LT K D +S G VL  + T +  +D  R
Sbjct:  724 SRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNR 783          
BLAST of EY702956 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.163e-12
Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 3
Query:   27 RLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGXQPGXVLXWMTRVRXAXDXXRGLEXLXEKGXXXLYPEI 272
            +L H NLV+L+GYC+E   R+L YEF   GSL + L       G +    L W+ R++ A D  +GL  L       +Y +I
Sbjct:  121 QLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLF----ANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDI 198          

HSP 2 Score: 39.2762 bits (90), Expect = 1.163e-12
Identity = 18/39 (46.15%), Postives = 24/39 (61.54%), Query Frame = 1
Query:  388 TLGHPAPQYRMTGQLTHKRDAHSSGAVLQELFTGRKPVD 504
            T G+ AP+Y  TG L  + D +S G VL EL  GR+ +D
Sbjct:  237 TFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALD 275          
BLAST of EY702956 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 2.006e-11
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 3
Query:   12 VSVVLRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGXQPGXVLXWMTRVRXAXDXXRGLEXL 236
            ++++  ++HENLV LLGYC E + ++L Y F + GSL D L+G    +      +L W TR+  A    RGL  L
Sbjct:  640 LNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKR-----KILDWPTRLSIALGAARGLAYL 709          

HSP 2 Score: 37.7354 bits (86), Expect = 2.006e-11
Identity = 19/53 (35.85%), Postives = 29/53 (54.72%), Query Frame = 1
Query:  346 P*DGTPLYFIPAPRTLGHPAPQYRMTGQLTHKRDAHSSGAVLQELFTGRKPVD 504
            P +G     +    T G+  P+Y  T QL+ K D  S G VL E+ +GR+P++
Sbjct:  747 PQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLN 799          
BLAST of EY702956 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 52.373 bits (124), Expect = 2.006e-11
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 3
Query:   12 VSVVLRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGXQPGXVLXWMTRVRXAXDXXRGLEXL 236
            ++++  ++HENLV LLGYC E + ++L Y F + GSL D L+G    +      +L W TR+  A    RGL  L
Sbjct:  641 LNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKR-----KILDWPTRLSIALGAARGLAYL 710          

HSP 2 Score: 37.7354 bits (86), Expect = 2.006e-11
Identity = 19/53 (35.85%), Postives = 29/53 (54.72%), Query Frame = 1
Query:  346 P*DGTPLYFIPAPRTLGHPAPQYRMTGQLTHKRDAHSSGAVLQELFTGRKPVD 504
            P +G     +    T G+  P+Y  T QL+ K D  S G VL E+ +GR+P++
Sbjct:  748 PQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLN 800          
The following BLAST results are available for this feature:
BLAST of EY702956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
Y2706_ARATH3.515e-2462.92Probable receptor-like protein kinase At2g47060 OS... [more]
Y2197_ARATH3.886e-2358.70Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
PTI1_SOLLC3.886e-2362.92Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y1154_ARATH4.755e-1538.20Probable serine/threonine-protein kinase At1g01540... [more]
Y2296_ARATH4.060e-1333.71Probable receptor-like protein kinase At2g42960 OS... [more]
Y5181_ARATH1.138e-1240.00Probable LRR receptor-like serine/threonine-protei... [more]
Y3545_ARATH1.163e-1236.59Probable receptor-like protein kinase At3g55450 OS... [more]
NORK_PEA2.006e-1138.67Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR2.006e-1138.67Nodulation receptor kinase OS=Medicago truncatula ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702956 ID=EY702956; Name=EY702956; organism=Citrus sinensis; type=EST; length=666bp
CCACGCGTCCGGTTTCAGTTGTTCTCAGATTGAAGCATGAAAATCTTGTC
GAGTTGCTCGGTTATTGTGTTGAAGGAAATCTCCGTGTTCTTGCTTATGA
ATTTGCTACAATGGGATCTCTTCATGACATATTGCATGGCAGAAAAGGAG
TTCAGGGAGNACAACCAGGTNCAGTGCTTGANTGGATGACACGGGTTAGA
ATNGCAGNTGATGNAGNAAGGGGGTTGGAGNANTTGNNTGAGAAGGGNCA
NNNTNNNTTATACCCAGAGATCTCCCACCTAGCTCTGCTCTTCTCTCCTA
GGAGTCTCCCGCTCCCATTGCCCATCTTTCCCTTCCCACTCCCGCCCCTG
AGATGGCACTCCCCTTTATTTCATTCCAGCTCCGCGGACCCTTGGTCATC
CCGCTCCACAATATCGCATGACGGGACAATTGACCCACAAAAGAGACGCG
CATAGCTCTGGGGCTGTCCTTCAAGAGCTCTTTACTGGGAGGAAACCTGT
TGATCCACTACGCCTCGTGGAACAAGACTTTTGTTACCGGCGCTACTTCT
AGATTGAGCGAACACCATTCCAGTCATGTGTAGACTAAATCCTTATGGCG
AATATTCCTCAAAAGGAGTGGTGAAGTTGGGCGCGCAATAGCATTACGTG
TGCACCCTGAAGGGTA
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