EY650230

Overview
NameEY650230
Unique NameEY650230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY650230 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 60/145 (41.38%), Postives = 78/145 (53.79%), Query Frame = 1 
Query:  394 MTLTLESIPGSS*YLDLFPDRRMSVFSNMYVLGLTVLAGIGGLLFRYDTGVYHDPFCF-KRYFEA*IKY--FSGGNIRTMASAGQ*LGLLR-GVAHDAYGPKNPHLLPLLCLTVGPF*GVCSQS--IGLISAVFIGAGSGLDSLT 810
            MTLT+ + PGSS YLD+FP+RRMS F N Y+LGLTV AGIGGLLF YDTGV      + K  FE  +K   F    I +MA  G  +G    G  +D YG K   L   +    G      +    + +   + +G G G+ S+T
Sbjct:    1 MTLTIPNAPGSSGYLDMFPERRMSYFGNSYILGLTVTAGIGGLLFGYDTGVISGALLYIKDDFEV-VKQSSFLQETIVSMALVGAMIGAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVT 144
The following BLAST results are available for this feature:
BLAST of EY650230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
INT1_ARATH4.439e-1641.38Probable inositol transporter 1 OS=Arabidopsis tha... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-G03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650230 ID=EY650230; Name=EY650230; organism=Citrus sinensis; type=EST; length=890bp
CAGGTTTTCGTCCGGATTAAAAGCCCGACCCAGCGTCCGCCCACGCTTTC
TGGAAGAAAAATTTCCCCCACCCTTCCCGAGAAAATTTTTACGAACCAAA
TCAAATCTTTTCCTGCTCGCTTTACAAAGTTTTAAAGCCTACAATTCAGC
TCCCACTTAACGGAAAACAAAAACAGAAAACCTTCGTCTCGGTTTAAATC
GTTTAAAATTTTTCTATTCCTTGACATGGGCACTGTATCACCACCTTCTC
ATCTCAGCATTTCAAAATTTTACTGAGTTTTTAATAATCTCCTTGAGATT
TTTTTCATCAAACGGCAGAAGTTCAATCCAATTCACTTGGCCTTCGGCCC
ATTTTGAATTAATCAATCTCGTCCGTACGATTCGAGAGCAAAGATGACGT
TGACGTTAGAGTCAATACCGGGAAGCTCATGATACTTGGACTTGTTTCCC
GATAGGAGGATGTCGGTTTTCAGTAATATGTATGTTCTTGGATTGACTGT
TCTCGCAGGCATTGGCGGTTTGCTCTTCCGGTATGACACTGGTGTCTATC
ATGACCCCTTCTGTTTTAAAAGATATTTTGAGGCATAAATCAAGTACTTT
TCTGGAGGAAACATTCGTACCATGGCCTCGGCTGGGCAATAGTTGGGGCT
GCTCCGGGGGGTGGCTCATGATGCTTATGGACCTAAAAATCCTCACCTCC
TGCCGCTGTTGTGTTTAACTGTGGGACCCTTTTAAGGGGTGTGCTCCCAA
TCCATTGGTCTCATCTCGGCCGTTTTTATAGGTGCCGGGAGTGGGCTAGA
TTCGCTTACTGTCCGGTCTCTTTTCCTTGTCTTCCGCTTCCTATTAAGGG
GTGGCTCTTGGCCCATTTGTCTTTTTATACCGTGGGGAAC
back to top