EY650224

Overview
NameEY650224
Unique NameEY650224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6965 contig Csv1_Contig6965:1..921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB5_ORYSJ (Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.198e-17
Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 3
Query:  609 SNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDL-------KAYHLQPNECKNNTDSGPSMFI 911
            SN   K+Y+ +EV  HN +DDCW+II  KVY+V+ ++E+HPGG D +L+  G D+T+ F    H+T    M+D++Y+GD+       +  ++ P +   N D  P   I
Sbjct:    2 SNDNKKVYTLEEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMMDEYYVGDIDTSTIPARTKYVPPKQPHYNQDKTPEFII 110          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.929e-15
Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 3
Query:  621 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAILAHA-GDDSTEGFYGPQHATRVFDMIDDFYIGDL-------KAYHLQPNECKNNTDSGPSMFILPL 920
            +K+++  EV+ HN   DCW++I  KVYDVT ++++HPGGD +L  A G D+T+ F    H++    M+D++Y+GD+       K  +  PN+   N D   S F++ L
Sbjct:    5 TKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVGDIDSATIPTKTKYTPPNQPHYNQDK-TSEFVVKL 111          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.143e-14
Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 3
Query:  624 KIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAILAHA-GDDSTEGFYGPQHATRVFDMIDDFYIGDLKAYHLQPNECKNNTDSGP 899
            KI++  EV  HN   DCW+II  KVYDVT ++E+HPGGD +L  A G D+T+ F    H++    M+D++Y+GD+ +  + P++ K      P
Sbjct:    3 KIFTLAEVAQHNNSKDCWLIINGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVGDIDSSSI-PSQVKYTPPKQP 94          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14
Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 3
Query:  624 KIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGD-AILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKA-------YHLQPNECKNNTDSGPSMFI 911
            K+ S +EV+ HNK  DCW+II  KVYDVT ++++HPGGD  +L+  G D+T  F    H+    DM+D ++IG++ +        ++ P +   N D  P   I
Sbjct:    6 KVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPEFII 109          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.950e-14
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 3
Query:  585 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKAYHLQPNECKNNTDSGPSMF 908
            K + S+   N ASK+YS  EV  HN  D  WII+   VYD T ++++HPGG D+IL +AG D TE F    H+ +   +++DF IG+L       +   NN+  G S F
Sbjct:  523 KKSISTPFMNTASKMYSMSEVKKHNSADSAWIIVHGHVYDATRFLKDHPGGIDSILINAGTDCTEEF-DAIHSDKAKKLLEDFRIGELITTGYTSDSSPNNSVHGSSSF 630          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  624 KIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGD-AILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKA-------YHLQPNECKNNTDSGPSMFI 911
            K+   +EV+ HNK  DCW+II  KVYDVT ++++HPGGD  +L+  G D+T  F    H+    DM++ +YIG++ +        ++ P +   N D  P   I
Sbjct:    6 KVLGFEEVSQHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEKYYIGEIDSSTVPATRTYVAPVQPAYNQDKTPEFMI 109          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB52_ARATH (Probable cytochrome b5 isoform 2 OS=Arabidopsis thaliana GN=At2g32720 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 39/108 (36.11%), Postives = 64/108 (59.26%), Query Frame = 3
Query:  621 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDL-------KAYHLQPNECKNNTDSGPSMFILPL 920
            +KI++  EV+ HN+  DCWI+I  KVY+VT ++E+HPGG D +L+  G D+T+ F    H+    +M++ +Y+G++       K  +  P +   N D   S FI+ L
Sbjct:    5 AKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSESAREMMEQYYVGEIDPTTIPKKVKYTPPKQPHYNQDK-TSEFIIKL 111          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 3
Query:  585 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKAY-HLQPNECKNNTDSGPS 902
            K + SS   N A+K YS  EV  HN RD  WII+   VYD T ++++HPGG D+IL +AG D TE F    H+ +   M++D+ IG+L    +   +   NN+  G S
Sbjct:  503 KKSVSSPFMNTATKSYSLSEVRRHNNRDSAWIIVNGHVYDCTRFLKDHPGGEDSILLNAGTDCTEEFEA-IHSDKAKKMLEDYRIGELMTTDYTSDSSSSNNSVHGNS 609          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB5S_TOBAC (Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 32/76 (42.11%), Postives = 53/76 (69.74%), Query Frame = 3
Query:  621 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHP-GGDAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDL 845
            SK+++  EV+ HN   DCW+II  KVY+VT ++E+HP GG+ +L+  G D+T+ F    H++    M+D++Y+GD+
Sbjct:    5 SKVFTLAEVSNHNNAKDCWLIISGKVYNVTKFLEDHPGGGEVLLSATGKDATDDFEDIGHSSSARAMLDEYYVGDI 80          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB5_RHIST (Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 3
Query:  621 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAILA-HAGDDSTEGFYGPQHATRVFDMIDDFYIGDL 845
            +KI+S DEV+ H  + D W++I NKVYD+T +V EHPGG+ +L    G D+TE F    H+    +M++++ IG L
Sbjct:    3 AKIFSLDEVSKHKTKSDLWVVIHNKVYDITRFVVEHPGGEEVLVDEGGKDATEAFEDIGHSDEAREMLEEYLIGSL 78          
The following BLAST results are available for this feature:
BLAST of EY650224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CYB5_ORYSJ4.198e-1737.61Cytochrome b5 OS=Oryza sativa subsp. japonica GN=O... [more]
CYB5_TOBAC3.929e-1537.04Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1[more]
CYB5_BOROF1.143e-1440.86Cytochrome b5 OS=Borago officinalis PE=2 SV=1[more]
CYB51_ARATH1.493e-1437.50Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN... [more]
NIA_PETHY1.950e-1440.37Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
CYB5_BRAOB9.678e-1436.54Cytochrome b5 OS=Brassica oleracea var. botrytis G... [more]
CYB52_ARATH9.678e-1436.11Probable cytochrome b5 isoform 2 OS=Arabidopsis th... [more]
NIA1_PHAVU1.651e-1340.74Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
CYB5S_TOBAC1.651e-1342.11Cytochrome b5, seed isoform OS=Nicotiana tabacum P... [more]
CYB5_RHIST3.678e-1343.42Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-F07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650224 ID=EY650224; Name=EY650224; organism=Citrus sinensis; type=EST; length=921bp
CCGGNATTACCCCCTCGACCCACGCGTCCGGTACTTTTCTAGGCCAAGTA
GCAGTAGATGTACCGGCCTAGAACCAAGTGAAAACAAATAACACCGCGGC
TGTGCCGGAGAGGGAATACTAACAGAAGTAAAATCTATCCGGCAAATCCG
ATTCGAATCTCTCTACTTAATCTGATCCATTGCTGTTTTTATAATTCACA
GGTAACTAATCTGACTTGTTTTCTCTATCGCGCCATTCATCAAGTTAGTT
ACTTCTTTAGAGCTACTTACTGCACTTGTTTGCTTTAAATATTCTTTACA
AGAGCAAAGTGACTAGTAGAAAGCACTCTTTTAGAAAAGAACTGAAATTT
GGCTTATTATCTGTAAATCTATTGAAAGCAGAGCACGTAGCAGCTGGGTA
GTGGATTTTGAAAGATGGTTATAATCGTGGCCGCATTAATTTTAGGTGCC
ATTTTGGGAGTCTTTATTTTCATCCCACGACACCCTGCATCTGGTAATCT
TTACATTTCAAATTAAAGGATTTGAAAGTGTTTATTTAATTGTGTTTGAT
ATTTTTTCTTCTGGGTGTAAATGCAGGCCATTCAAAAAGTACTCGCTCAA
GTGCTAACAGTAACAAGGCATCAAAAATCTACAGCAAAGATGAAGTAACA
TTGCATAATAAGAGAGATGACTGTTGGATCATTATCAAGAACAAGGTGTA
TGATGTTACCTCATATGTAGAGGAACACCCAGGTGGCGATGCTATCCTAG
CACATGCTGGTGATGATTCAACTGAAGGATTTTATGGGCCACAGCATGCA
ACCCGAGTCTTTGACATGATAGATGACTTTTACATTGGGGATCTGAAAGC
ATATCACTTGCAGCCAAACGAGTGTAAAAATAACACAGACTCTGGACCTT
CCATGTTTATTCTTCCATTGN
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