EY650223

Overview
NameEY650223
Unique NameEY650223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY650223 vs. ExPASy Swiss-Prot
Match: AVT1_YEAST (Vacuolar amino acid transporter 1 OS=Saccharomyces cerevisiae GN=AVT1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.469e-22
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 3 
Query:  201 VLCGVGILSTPYAAKEGGW-FGLLILVAFGVLSFYTGILLRRCLDSEPGLETYPDIGQAAFGTAGRIAVSVILYAELYACCIEYIILESDNLSSLFP 488
            VL G+G+L+ P   K  GW  GL +L  F + +F T  LL RCLD++P L +Y D+G AAFGT GR  +S +   +L    +  +IL  D+L++LFP
Sbjct:  220 VLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRCLDTDPTLISYADLGYAAFGTKGRALISALFTLDLLGSGVSLVILFGDSLNALFP 316

HSP 2 Score: 40.4318 bits (93), Expect = 9.469e-22
Identity = 27/87 (31.03%), Postives = 46/87 (52.87%), Query Frame = 2 
Query:  536 FALMTTLAVLPTCWLRDLTVLSYISAGGVIASILVVLCLFWVGLVDQVN-------IHSKGTPLNLATLXVAIGLYGYCYSGHAVFP 775
            F +++   V P  ++  L+VLS IS  G++++   VL +   GL    +       + +   P++L  L ++IGL   C+ GHAVFP
Sbjct:  323 FKIVSFFIVTPPVFI-PLSVLSNISLLGILSTTGTVLVICCCGLYKSSSPGSLVNPMETSMWPIDLKHLCLSIGLLSACWGGHAVFP 408
The following BLAST results are available for this feature:
BLAST of EY650223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AVT1_YEAST9.469e-2243.30Vacuolar amino acid transporter 1 OS=Saccharomyces... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-F06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650223 ID=EY650223; Name=EY650223; organism=Citrus sinensis; type=EST; length=937bp
TTTTCTTTTTATTTTCCCGATATATTCCCATAAAACTATTGCTAAACTCT
AAGCTCAAAACTGATTAAGTCAATAGGAGATAGTTCTGTAGATTTGTTAT
AAACAAGATATGAGAACATGCAACATTTTTTTTTTTCAGATAAAAAAATT
TTGCGAAATCTAATTGAACTGGCTTGAACTAAAACAATACAGGCATGAAT
GTTCTATGTGGAGTTGGAATTCTATCTACACCATATGCAGCTAAAGAAGG
AGGATGGTTTGGACTTTTGATTTTGGTAGCATTTGGAGTGCTTTCTTTCT
ACACTGGAATACTTTTGCGTCGCTGCCTGGATAGTGAACCTGGGCTGGAG
ACTTACCCAGATATAGGCCAAGCTGCATTTGGTACGGCAGGGAGAATAGC
CGTTTCAGTAATACTATATGCGGAACTCTATGCTTGCTGTATTGAATACA
TAATTTTGGAGAGTGATAACCTATCGTCACTATTCCCGAATGCCATTTAA
GTTTTGGTGGATTTTATCTAAATTCACATCATTTGTTCGCCTTGATGACT
ACCCTCGCTGTTCTTCCTACTTGTTGGCTAAGAGACCTCACAGTTCTTAG
TTACATATCTGCCGGTGGAGTTATTGCATCAATCTTAGTGGTCCTCTGCT
TGTTCTGGGTTGGTCTGGTAGATCAAGTCAACATTCATAGCAAAGGAACA
CCGCTGAACCTTGCTACTCTTNCTGTCGCTATTGGTCTCTACGGTTACTG
CTACTCTGGACATGCTGTTTTCCCAACATCTATACTNAATGGCACAACCT
AACCATTTCCGAAGGTNCCTATACATGTTTTCTTATTNGTACGGCATGTA
TGCTGGAGTTGCTATATGGGGTCACGATTTTGGGAGAATTACGTGGGNGA
GTTACCCTTACATGCCGAAGATGTGTTGCCCCAAATT
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