EY650214

Overview
NameEY650214
Unique NameEY650214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 5.228e-84
Identity = 155/238 (65.13%), Postives = 170/238 (71.43%), Query Frame = 2
Query:  158 MELDSIECVSSMDGLMEEDEISXXXXXXXXXXXQFASSKPHXXXXXXXXXXXXXXXXXXXXPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHKVDMHTGCTFNHRYVKSNPRE*RMLLGMLTVSIVL-VILLPSFRAYQLG 868
            ME DS+ECVSS    + ++              QF+S+K H                    PTA APATSV+ELLECPVCT SMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLELPCK+Y+L CPEIFPYYSKLKHE +C FRPY+CPYAGS+C +VGDIP+LVAHLRDDHKVDMH G TFNHRYVKSNPRE      MLTV           F A+QLG
Sbjct:    1 METDSMECVSSTGNEIHQN-------GNGHQSYQFSSTKTHGGAAAAAVVTNIVG------PTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLG 225          
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.424e-81
Identity = 151/238 (63.45%), Postives = 168/238 (70.59%), Query Frame = 2
Query:  158 MELDSIECVSSMDGLMEEDEISXXXXXXXXXXXQFASSKPHXXXXXXXXXXXXXXXXXXXXPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHKVDMHTGCTFNHRYVKSNPRE*RMLLGMLTVSIVL-VILLPSFRAYQLG 868
            M+LDS++C S+MD + +++EI             +AS   H                       +   TSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLELPCK+  L CPEIFPYYSKLKHE +C FRPY+CPYAGS+CSV GDIP+LVAHLRDDHKVDMH+GCTFNHRYVKSNPRE      MLTV           F A+QLG
Sbjct:    1 MDLDSMDCTSTMD-VTDDEEI-------HQDRHSYASVSKHHHTNNNTTNVNAAASG------LLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLG 224          
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 3.507e-80
Identity = 139/174 (79.89%), Postives = 148/174 (85.06%), Query Frame = 2
Query:  350 IAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHKVDMHTGCTFNHRYVKSNPRE*RMLLGMLTV-SIVLVILLPSFRAYQLG 868
            I+PATSV+ELLECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY+L C  IFPYYSKLKHE  C FRPY+CPYAGS+C+ VGDI +LVAHLRDDHKVDMHTGCTFNHRYVKSNPRE      MLTV           F A+QLG
Sbjct:   34 ISPATSVYELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLG 207          
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.382e-68
Identity = 117/150 (78.00%), Postives = 125/150 (83.33%), Query Frame = 2
Query:  368 VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHKVDMHTGCTFNHRYVKSNPRE*RMLLGMLTV 817
            V+ELLECPVCTN MYPPIHQC NGHTLCS CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y +L C +IFPYYSKLKHE  C FRPY CPYAGS+CSV GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP E      MLTV
Sbjct:   54 VYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTV 203          
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 6.860e-68
Identity = 116/153 (75.82%), Postives = 127/153 (83.01%), Query Frame = 2
Query:  359 ATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHKVDMHTGCTFNHRYVKSNPRE*RMLLGMLTV 817
            +  V+ELLECPVCTN MYPPIHQC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y +L C +IFPYYSKLKHE  C FR Y+CPYAGS+CSV GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP E      MLTV
Sbjct:   48 SNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTV 200          
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SINA_SCHMA (E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.806e-29
Identity = 56/128 (43.75%), Postives = 83/128 (64.84%), Query Frame = 2
Query:  344 TAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHK 727
            T+ + +  +  L ECPVC +   PPI QC +GH +C++C++++ + CPTCR  L +IR LA+EK+A S+  PCKY    CPE F Y SK +HE  C +RPY+CP  G+ C  +G++  ++ HL   HK
Sbjct:  112 TSDSSSIDLASLFECPVCMDYALPPIMQCQSGHIVCASCRSKLSS-CPTCRGNLDNIRNLAMEKLASSVLFPCKYSTSGCPETFHYTSKSEHEAACEYRPYDCPCPGASCKWLGELEQVMPHLVHHHK 238          
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SIAH1_DANRE (E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 56/125 (44.80%), Postives = 75/125 (60.00%), Query Frame = 2
Query:  353 APATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHK 727
            A  + +  L ECPVC + + PPI QC +GH +CS C+ ++   CPTCR  LG IR LA+EKVA S+  PCKY    C    P+  K +HE +C FRPY+CP  G+ C   G +  ++ HL   HK
Sbjct:   30 ASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLLHQHK 153          
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SIAH1_RAT (E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.444e-27
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 2
Query:  377 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHK 727
            L ECPVC + + PPI QC +GH +CS C+ ++   CPTCR  LG IR LA+EKVA S+  PCKY    C    P+  K +HE +C FRPY+CP  G+ C   G +  ++ HL   HK
Sbjct:   38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHK 153          
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SIA1A_MOUSE (E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.444e-27
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 2
Query:  377 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHK 727
            L ECPVC + + PPI QC +GH +CS C+ ++   CPTCR  LG IR LA+EKVA S+  PCKY    C    P+  K +HE +C FRPY+CP  G+ C   G +  ++ HL   HK
Sbjct:   38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHK 153          
BLAST of EY650214 vs. ExPASy Swiss-Prot
Match: SIAH1_HUMAN (E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.875e-27
Identity = 55/117 (47.01%), Postives = 71/117 (60.68%), Query Frame = 2
Query:  377 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLXCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHK 727
            L ECPVC + + PPI QC +GH +CS C+ ++   CPTCR  LG IR LA+EKVA S+  PCKY    C    P+  K  HE +C FRPY+CP  G+ C   G +  ++ HL   HK
Sbjct:   38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHK 153          
The following BLAST results are available for this feature:
BLAST of EY650214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SINA4_ARATH5.228e-8465.13E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis ... [more]
SINA3_ARATH1.424e-8163.45E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis ... [more]
SINA5_ARATH3.507e-8079.89E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis ... [more]
SINA2_ARATH1.382e-6878.00E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis ... [more]
SINA1_ARATH6.860e-6875.82Putative E3 ubiquitin-protein ligase SINAT1 OS=Ara... [more]
SINA_SCHMA4.806e-2943.75E3 ubiquitin-protein ligase sina OS=Schistosoma ma... [more]
SIAH1_DANRE2.637e-2744.80E3 ubiquitin-protein ligase Siah1 OS=Danio rerio G... [more]
SIAH1_RAT3.444e-2747.01E3 ubiquitin-protein ligase SIAH1 OS=Rattus norveg... [more]
SIA1A_MOUSE3.444e-2747.01E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus... [more]
SIAH1_HUMAN5.875e-2747.01E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-E08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650214 ID=EY650214; Name=EY650214; organism=Citrus sinensis; type=EST; length=923bp
CCCACGCTTTCGCCCACGCGTCCGTTCTTCTTCTCCTTCATAAGAGAAAA
AAACAAAAAAAAACTTCGGAGAAGAAGAGAGAAAAAGGAAGATACCTATT
AAAAGTTTTTGATTAAAAATTGAAAAAAATTTGTTGTTGATTTTGTTTTA
TTGTCAGATGGAATTGGATAGTATTGAGTGTGTGTCATCCATGGATGGGT
TGATGGAAGAGGATGAGATCAGCCATCATCACCATCCTCCTCTTCTTCAT
CACCATCAATTTGCATCATCAAAGCCTCACAATAATGCCATCAACAACAA
TAATGCAGCAAACACTAATGGCATCAATGGTATTGTGGGTCCCACGGCGA
TCGCCCCTGCCACCAGTGTTCATGAGTTGCTTGAATGCCCTGTTTGCACC
AATTCTATGTACCCACCAATCCATCAGTGCCACAACGGACACACACTTTG
TTCCACTTGTAAAACAAGGGTACACAACCGGTGCCCCACTTGTAGACAGG
AGCTCGGAGATATTAGGTGTTTAGCATTGGAGAAGGTGGCTGAATCACTT
GAACTGCCATGCAAGTATTACCACCTGNGTTGCCCAGAGATATTTCCATA
TTACAGCAAACTTAAACATGAGGTTATGTGCACCTTCAGACCGTATAACT
GCCCATATGCTGGGTCAGATTGCTCTGTCGTTGGGGACATCCCATACTTG
GTTGCCCATTTGAGGGACGATCACAAAGTAGATATGCACACAGGATGCAC
ATTCAATCATCGCTATGTGAAGTCCAATCCCCGTGAATAGAGAATGCTAC
TTGGNATGCTTACAGTTTCCATTGTTTTGGTCATACTTCTGCCTTCATTT
CGAGCATACCAGCTGGGACAGCTCCTGTTACATGGCATTNCTCGTTTTTG
GGTGATGAGACTGAGGCTCGAGC
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