EY702949

Overview
NameEY702949
Unique NameEY702949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 3.520e-80
Identity = 138/176 (78.41%), Postives = 152/176 (86.36%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKV 567
            MGRKFFVGGNWKCNGT EEVKKIV++LNE +              ++FL  VK+ LR DFHVAAQNCWVKKGGAFTGE+SAEMLVNLGIPWVILGHSERR +LNES+EFVGDK AYALSQGLKVIACVGETLEQREAGST+ VVAAQTKAIA++VS W+NIV+AYEPVWAIGTGKV
Sbjct:    1 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQGLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKV 176          

HSP 2 Score: 36.965 bits (84), Expect = 3.520e-80
Identity = 14/17 (82.35%), Postives = 17/17 (100.00%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKWL 617
            A+PAQAQE+HFELRKW+
Sbjct:  177 ASPAQAQEVHFELRKWI 193          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 7.313e-78
Identity = 154/251 (61.35%), Postives = 180/251 (71.71%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLKGI-GCPSLNVERIFGCGVFL*ITDFLDIFKS 789
            MGRKFFVGGNWKCNGT EEVKKI++ LN                 ++FL LVK+ LRPDFHVAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +L ES+EFVGDKVAYALSQGLKVIACVGETLE+RE+GSTMDVVAAQTKAIADRV  W+N+V+AYEPVWAIGTGKV    + ++          AN  PE+   +T     GSVN    K + G P ++   + G  +     +F+DI K+
Sbjct:    1 MGRKFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEERESGSTMDVVAAQTKAIADRVKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHAELRKWLAANVSPEVAA-STRIIYGGSVNGANCKELGGQPDVDGFLVGGASL---KPEFIDIIKA 247          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 277.715 bits (709), Expect = 1.018e-76
Identity = 133/176 (75.57%), Postives = 150/176 (85.23%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKV 567
            MGRKFFVGGNWKCNGT ++V KIV +LNEGQ              ++FL +VKS LRP+  VAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +L ES+EFVGDKVAYALSQGLKVIACVGETLEQRE+GSTMDVVAAQTKAI++R+  W+N+V+AYEPVWAIGTGKV
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKV 176          

HSP 2 Score: 30.8018 bits (68), Expect = 1.018e-76
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKWL 617
            ATP QAQE+H  LRKWL
Sbjct:  177 ATPDQAQEVHDGLRKWL 193          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 286.96 bits (733), Expect = 1.056e-76
Identity = 144/220 (65.45%), Postives = 168/220 (76.36%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLK 699
            MGRKFFVGGNWKCNGT ++V+KIV  LNEGQ              ++FL +VKS LR +FHVAAQNCWVKKGGAFTGE+SAEMLVNLG+PWVILGHSERR +L ES+EFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIA+++  WSN+V+AYEPVWAIGTGKV    + ++   +  +    N  PE+  ++T     GSV     K
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAIGTGKVATPAQAQEVHASLRDWLKTNASPEV-AESTRIIYGGSVTAANCK 219          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 2.352e-76
Identity = 160/257 (62.26%), Postives = 182/257 (70.82%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKV--PLQR-----KLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLKGIGCPSLNVERIFGCGVFL*ITDFLDIFKS 789
            M RKFFVGGNWKCNGT EEVKKIV+ LNE Q              ++FL LVKS+LR DF VAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR ILNES EFVGDKVAYAL+QGLKVIACVGETLE+REAGSTMDVVAAQTKAIADRV++WSN+V+AYEPVWAIGTGKV  P Q      +L+K++        A  +       T     GSVN    K +G    +V+     G  L   +F+DI K+
Sbjct:    1 MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTNWSNVVIAYEPVWAIGTGKVASPAQAQEVHDELRKWL--------AKNVSADVAATTRIIYGGSVNGGNCKELG-GQADVDGFLVGGASL-KPEFIDIIKA 247          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 271.166 bits (692), Expect = 5.996e-72
Identity = 138/220 (62.73%), Postives = 161/220 (73.18%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLK 699
            MGRKFFVGGNWKCNGT  +V+ IV+ LN GQ              ++FL  VK  LRP+  VAAQNCWVKKGGAFTGE+SAEMLVNLGIPWVILGHSERR +L ES EFVG+KVAYAL+QGLKVIACVGETLEQREAGSTM+VVA QTKAIAD++  W+N+V+AYEPVWAIGTGKV    + ++   N  +    N  PE+  ++T     GSV     K
Sbjct:    1 MGRKFFVGGNWKCNGTVSQVETIVNTLNAGQIASPDVVEVVVSPPYVFLPTVKDKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRSLLAESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIADKIKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHANLRDWLKTNVSPEV-AESTRIIYGGSVTGASCK 219          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 269.24 bits (687), Expect = 2.278e-71
Identity = 137/220 (62.27%), Postives = 160/220 (72.73%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLK 699
            MGRKFFVGGNWKCNGT E+V+ IV  LN GQ              ++FL +VK+ LRP+  VAAQNCWVKKGGAFTGE+SAEML NLG+PWVILGHSERR +L ES EFVG+KVAYAL+QGLKVIACVGETLEQREAGSTM+VVA QTKAIA ++  WSN V+AYEPVWAIGTGKV    + ++   N  +    N  PE+  ++T     GSV     K
Sbjct:    1 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQIVSPDVVEVVVSPPYVFLPIVKAKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRSLLGESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIAGKIKDWSNGVVAYEPVWAIGTGKVATPAQAQEVHANLRDWLKTNVSPEV-AESTRIIYGGSVTGASCK 219          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.848e-58
Identity = 110/177 (62.15%), Postives = 125/177 (70.62%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKV 567
            MGRKFFVGGNWKCNGT E V KIV  LNE                ++FL    + L+ +  VAAQNCWVKKGGAFTGE+SA+ML NLGI WVILGHSERR +L ES+EFVG K AYA S+GL VIAC+GE LE+REAG T DV   Q K+ A      W N+V+AYEPVWAIGTGKV
Sbjct:    1 MGRKFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAIGTGKV 177          

HSP 2 Score: 27.335 bits (59), Expect = 2.848e-58
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKWL 617
            A+P QAQE+H  +R WL
Sbjct:  178 ASPEQAQEVHVAVRDWL 194          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.612e-56
Identity = 118/189 (62.43%), Postives = 140/189 (74.07%), Query Frame = 1
Query:  223 VAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLKGIGCPSLNVERIFGCGVFL*ITDFLDIFKS 789
            VAAQNCWVKKGGAFTGE+SAEML NLG+PWVILGHSERR +LNE++EFVGDKVAYALSQGLKVIACVGETLEQREAG+TM+VVAAQTKAIAD++SSW N+VLAYEPVWAIGTGKV    + ++        F  N   E+   +T     GSV+    K +G    +V+     G  L   +F+DI K+
Sbjct:    3 VAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRALLNETNEFVGDKVAYALSQGLKVIACVGETLEQREAGTTMEVVAAQTKAIADKISSWDNVVLAYEPVWAIGTGKVASPAQAQEVHAGLRKWFCDNVSAEVSA-STRIIYGGSVSGSNCKELG-GQTDVDGFLVGGASL-KPEFIDIIKA 188          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 7.461e-56
Identity = 103/173 (59.54%), Postives = 123/173 (71.10%), Query Frame = 1
Query:   49 KFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKV 567
            KFFVGGNWKCNGT E + K+VS LN                 F+++  VKSSL     V+AQN W+ KGGAFTGEISAE LV++G  WVILGHSERR ++ E  EF+G K AYALSQ LKV+AC+GE LE+REAG T DV   Q KA AD ++ W+N+V+AYEPVWAIGTGKV
Sbjct:   48 KFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPP--FIYIDQVKSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAIGTGKV 218          

HSP 2 Score: 26.9498 bits (58), Expect = 7.461e-56
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKWL 617
            A+P QAQE+H  +R WL
Sbjct:  219 ASPEQAQEVHAAVRDWL 235          
The following BLAST results are available for this feature:
BLAST of EY702949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_COPJA3.520e-8078.41Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_PETHY7.313e-7861.35Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_ORYSJ1.018e-7675.57Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_MAIZE1.056e-7665.45Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_ARATH2.352e-7662.26Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_SECCE5.996e-7262.73Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_HORVU2.278e-7162.27Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_STELP2.848e-5862.15Triosephosphate isomerase, cytosolic OS=Stellaria ... [more]
TPIS_LACSA4.612e-5662.43Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIC_SECCE7.461e-5659.54Triosephosphate isomerase, chloroplastic OS=Secale... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-B02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702949 ID=EY702949; Name=EY702949; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGCACACACCGACTCACGCACTCGTCGAACATGGGCAGGAA
GTTCTTCGTCGGCGGTAACTGGAAATGCAATGGAACACCTGAAGAAGTGA
AAAAGATAGTGAGCGTACTCAATGAAGGTCAAGTTCCATCTTCTGATGTC
GTTGAGGTCGTTGTTAGCCCTCCGTTTCTGTTTCTTGGACTGGTGAAGAG
TTCGTTGAGGCCTGATTTTCATGTTGCGGCACAGAATTGCTGGGTCAAGA
AGGGAGGTGCTTTCACCGGTGAGATTAGTGCGGAAATGCTCGTCAATTTG
GGTATTCCTTGGGTCATTCTTGGTCATTCTGAAAGGAGACTCATTTTGAA
TGAATCACATGAGTTTGTTGGGGATAAGGTTGCATATGCACTTTCTCAAG
GTTTGAAGGTGATTGCTTGTGTTGGTGAGACACTTGAGCAGCGTGAAGCA
GGATCTACTATGGATGTTGTTGCTGCACAAACTAAAGCAATCGCAGATCG
AGTCTCAAGCTGGTCAAACATTGTTTTGGCCTATGAACCTGTGTGGGCTA
TTGGAACTGGGAAGGTGCCACTCCAGCGCAAGCTCAAGAAATACATTTTG
AACTGAGGAAATGGCTTTTTTGCAAACCCCATTCCTGAAATTTGTTGCGA
CAACACGGAATCATTTACCGAAGGATCCGTTAATTGGTGCAAACTGAAAG
GAATTGGCTGCCCAAGCCTGAATGTTGAACGTATTTTTGGTTGTGGGGTG
TTTCTTTAAATCACGGATTTCCTTGACATCTTTAAATCTGTTTGAGCTGG
AGATAAATTTCTTAATCTTTATTTCAGGGCAGTCTGGCTTGAAAAAATAT
TCTAGGTTGGGGATATATATAAATCCTTTTGGGAAATTTCAGAGAAACCT
TTGCTTTTTTATTACCGCTCCAT
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