EY650137

Overview
NameEY650137
Unique NameEY650137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: RELA_BACSU (GTP pyrophosphokinase OS=Bacillus subtilis GN=relA PE=3 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 5.331e-24
Identity = 58/143 (40.56%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  153 VQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIK 581
            V+KA  +A+ AH  Q+RK+G+PY+ H I    IL  L     +    T+  G LHDVV+D   +L  ++E F +EVA LV GV++L  I    +              ++A + R M + M  D RV+LIKLADRLHNMRT+K
Sbjct:   28 VEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDL-----EMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEE------------QQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLK 153          

HSP 2 Score: 33.113 bits (74), Expect = 5.331e-24
Identity = 17/40 (42.50%), Postives = 24/40 (60.00%), Query Frame = 1
Query:  580 KARAVSQETLLIWCSLASKLGLWALKAELKNLCFAVLXPQ 699
            K R +S ETL I+  LA +LG+  +K EL++     L PQ
Sbjct:  159 KQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQ 198          
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: RELA_MYCLE (Probable GTP pyrophosphokinase OS=Mycobacterium leprae GN=relA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.034e-21
Identity = 62/152 (40.79%), Postives = 85/152 (55.92%), Query Frame = 3
Query:  129 YPIFNDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGH-EEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIK 581
            YP  N   VQ+A   A + H  Q R++GDPY+TH +    ILA L        + T+VA +LHD V+D   +L ++ EEFGDEV  LV GV++L  +                LG   E   +R M+  M  DPRV++IK+ADRLHNMRT++
Sbjct:   72 YPKANLSIVQRAFEVADQRHASQLRRSGDPYITHPLAVANILAEL-----GMDITTLVAALLHDTVEDTGYTLEALSEEFGDEVGHLVDGVTKLDRV---------------VLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMR 203          
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: RELA_STRCO (GTP pyrophosphokinase OS=Streptomyces coelicolor GN=relA PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19
Identity = 57/144 (39.58%), Postives = 83/144 (57.64%), Query Frame = 3
Query:  150 QVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIK 581
            Q+++A   A+R H GQ RK+GDPY+TH +    ILA L          T++AG+LHD V+D    L  +  +FGD V  LV GV++L           ++   +      +A  +R M++ M  DPRV++IKLADRLHNMRT++
Sbjct:  126 QIERAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPA-----TLMAGLLHDTVEDTEYGLEDLRRDFGDVVTLLVDGVTKLD----------KVKFGEAA----QAETVRKMVVAMAKDPRVLVIKLADRLHNMRTMR 250          
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: RELA_CORGL (GTP pyrophosphokinase OS=Corynebacterium glutamicum GN=relA PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19
Identity = 58/152 (38.16%), Postives = 88/152 (57.89%), Query Frame = 3
Query:  129 YPIFNDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHE-EANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIK 581
            +P  + + +++A   A+R H G  RK+GDPY+TH +    I A +   +      T+VA +LHD V+D   SL  +  +FG+EVA+LV GV++L  +                LG   EA  +R M++ M  DPRV++IK+ADRLHNMRT++
Sbjct:   47 HPRADVQVLERAYDTAERLHDGVIRKSGDPYITHPLAVATIAAEIGMDT-----TTLVAALLHDTVEDTDYSLDDLTRDFGEEVARLVDGVTKLDKV---------------ALGAAAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMR 178          
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: SPOT_SHIFL (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Shigella flexneri GN=spoT PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 56/144 (38.89%), Postives = 88/144 (61.11%), Query Frame = 3
Query:  147 EQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTI 578
            +++++A   A+ AH GQ R +G+PY+TH +    ILA +     K   +T++A +LHDV++D   +   +E+ FG  VA+LV GVS+L   ++L  R ++           +A + R M++ MV D RV+LIKLADR HNMRT+
Sbjct:   21 KRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEM-----KLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKL---DKLKFRDKK---------EAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTL 147          
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: SPOT_ECOLI (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Escherichia coli (strain K12) GN=spoT PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 56/144 (38.89%), Postives = 88/144 (61.11%), Query Frame = 3
Query:  147 EQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTI 578
            +++++A   A+ AH GQ R +G+PY+TH +    ILA +     K   +T++A +LHDV++D   +   +E+ FG  VA+LV GVS+L   ++L  R ++           +A + R M++ MV D RV+LIKLADR HNMRT+
Sbjct:   21 KRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEM-----KLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKL---DKLKFRDKK---------EAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTL 147          
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: SPOT_ECO57 (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Escherichia coli O157:H7 GN=spoT PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 56/144 (38.89%), Postives = 88/144 (61.11%), Query Frame = 3
Query:  147 EQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTI 578
            +++++A   A+ AH GQ R +G+PY+TH +    ILA +     K   +T++A +LHDV++D   +   +E+ FG  VA+LV GVS+L   ++L  R ++           +A + R M++ MV D RV+LIKLADR HNMRT+
Sbjct:   21 KRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEM-----KLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKL---DKLKFRDKK---------EAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTL 147          
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: RELA_MYXXA (GTP pyrophosphokinase OS=Myxococcus xanthus GN=relA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 3
Query:  153 VQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEE--ANDLRVMLLGMVDDPRVVLIKLADRLHNMRTI 578
            ++KA  ++ + H GQ RK+G+PYL H +    IL  L     K    ++V G+LHD ++D   +   + E FG EVA LV GV++LS  +              +L  EE  A + R M++ M  D RV+L+KLADR HNMRT+
Sbjct:   41 IKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGEL-----KLDEASIVTGLLHDTIEDTLATEEELTELFGSEVAHLVDGVTKLSKFSA-----------SASLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTL 168          
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: RELA_MYCTU (Probable GTP pyrophosphokinase OS=Mycobacterium tuberculosis GN=relA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 59/152 (38.82%), Postives = 85/152 (55.92%), Query Frame = 3
Query:  129 YPIFNDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHE-EANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIK 581
            YP  +   +Q+A   A + H  Q R++GDPY+TH +    ILA L   +      T+VA +LHD V+D   +L ++ EEFG+EV  LV GV++L  +                LG   E   +R M+  M  DPRV++IK+ADRLHNMRT++
Sbjct:   75 YPKADLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDT-----TTLVAALLHDTVEDTGYTLEALTEEFGEEVGHLVDGVTKLDRV---------------VLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMR 206          
BLAST of EY650137 vs. ExPASy Swiss-Prot
Match: RELA_MYCBO (Probable GTP pyrophosphokinase OS=Mycobacterium bovis GN=relA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 59/152 (38.82%), Postives = 85/152 (55.92%), Query Frame = 3
Query:  129 YPIFNDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHE-EANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIK 581
            YP  +   +Q+A   A + H  Q R++GDPY+TH +    ILA L   +      T+VA +LHD V+D   +L ++ EEFG+EV  LV GV++L  +                LG   E   +R M+  M  DPRV++IK+ADRLHNMRT++
Sbjct:   75 YPKADLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDT-----TTLVAALLHDTVEDTGYTLEALTEEFGEEVGHLVDGVTKLDRV---------------VLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMR 206          
The following BLAST results are available for this feature:
BLAST of EY650137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RELA_BACSU5.331e-2440.56GTP pyrophosphokinase OS=Bacillus subtilis GN=relA... [more]
RELA_MYCLE2.034e-2140.79Probable GTP pyrophosphokinase OS=Mycobacterium le... [more]
RELA_STRCO1.116e-1939.58GTP pyrophosphokinase OS=Streptomyces coelicolor G... [more]
RELA_CORGL1.116e-1938.16GTP pyrophosphokinase OS=Corynebacterium glutamicu... [more]
SPOT_SHIFL2.487e-1938.89Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
SPOT_ECOLI2.487e-1938.89Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
SPOT_ECO572.487e-1938.89Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
RELA_MYXXA2.487e-1938.19GTP pyrophosphokinase OS=Myxococcus xanthus GN=rel... [more]
RELA_MYCTU2.487e-1938.82Probable GTP pyrophosphokinase OS=Mycobacterium tu... [more]
RELA_MYCBO2.487e-1938.82Probable GTP pyrophosphokinase OS=Mycobacterium bo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-F08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650137 ID=EY650137; Name=EY650137; organism=Citrus sinensis; type=EST; length=885bp
CGCATGTCGCTGTCACCGCCGTCGCCATTGCTTGTGGTGCTTGTCTTTCT
ACTAAGGTTGATTTCCTGTGGCCTAAACTCGAGGAGCAACCCGGTACTTT
TATAGTGGATGGAGTCGATGTAACTGGGTATCCCATATTTAATGATGAAC
AGGTGCAAAAGGCTATTGCATTTGCTAAAAGAGCTCACCATGGCCAGTTT
CGCAAAACAGGAGATCCATATTTAACACATTGTATCCATACAGGAAGAAT
CTTAGCCATGCTGATTCCGTCAAGTGGCAAACGAGCTGTTGACACAGTCG
TTGCTGGTATTCTACATGACGTTGTTGATGATGCATGTGAAAGTTTGGGC
AGTATAGAAGAAGAGTTTGGTGATGAAGTAGCAAAATTGGTTGCTGGAGT
TTCCAGATTAAGTTACATAAATCAGCTACTTAGGAGACATCGGAGGATAA
ATGTAAACCAGGGTACCCTTGGTCATGAAGAGGCAAATGACTTACGAGTT
ATGCTCTTGGGCATGGTTGATGATCCACGTGTGGTGCTTATCAAGCTTGC
GGACCGTCTTCACAATATGAGAACCATCAAAGGCTCGAGCTGTATCACAG
GAGACGCTGCTTATTTGGTGCTCACTTGCTTCCAAATTGGGTTTGTGGGC
GCTGAAAGCTGAATTAAAAAATCTTTGCTTTGCTGTTCTTCANCCTCAAA
TTTTNCGGAAGATGCGAGCTGATCTAGCATCCATGTGGAGCCCTAGAAAC
AGAGTAGGCTATGCAAGAAGATAAACTACATAGTTAGCTCACCACCTTGG
ATGAAAGACTGCTCTGATGATGAAAGTCTACACATTTGATGAGCATGTCT
AGCATGAAGGATCTTTGGAAGCTGTGCTGCCTTTG
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