EY650116

Overview
NameEY650116
Unique NameEY650116
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VPS33_ARATH (Vacuolar protein sorting-associated protein 33 homolog OS=Arabidopsis thaliana GN=VPS33 PE=2 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 4.880e-105
Identity = 190/262 (72.52%), Postives = 224/262 (85.50%), Query Frame = 2
Query:    2 ACEKILEEEKGHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLRQKATSMKQDYXXXXXXXXXXXXLKDFVKKLNSLPEMTXHINLAQHLSTFTSKPSFLGQLDMEHXIIEAXXYDICFE 787
            ACEKILE+EK HNL+T+ E+PLYMVPLDEDV+SFEL+L+ K+  VDGD SS WHIAKAIH+LEF+FG+I  +RAKGKASVRVA+ILNRMQ EEPV+ +D+  PE++TL+L+DREVDMVTPMCSQLTYEGL+DE L I+NG+VE+D+S+MGA QQ+GKKMKVPLNSSDKLFKE RDLNFEVVVQVLRQKA +MK+DY            LKDFVKKLNSLPEMT HI+LAQHL+TFTSK SF  QLDME  ++EA  YDIC+E
Sbjct:  120 ACEKILEQEKVHNLVTVKEFPLYMVPLDEDVISFELELSEKDCLVDGDVSSLWHIAKAIHELEFSFGVISKMRAKGKASVRVADILNRMQVEEPVNSNDVGRPEVDTLILLDREVDMVTPMCSQLTYEGLIDEILHISNGAVEVDSSVMGA-QQEGKKMKVPLNSSDKLFKETRDLNFEVVVQVLRQKAMTMKEDY-TEINSTQTVSELKDFVKKLNSLPEMTRHIHLAQHLTTFTSKQSFNSQLDMEQTLVEAENYDICYE 379          

HSP 2 Score: 25.0238 bits (53), Expect = 4.880e-105
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  781 FRVIEEMIHXQEPL 822
            +  IEEMIH QEPL
Sbjct:  378 YEYIEEMIHKQEPL 391          
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VP33A_RAT (Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus GN=Vps33a PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.357e-30
Identity = 82/252 (32.54%), Postives = 133/252 (52.78%), Query Frame = 2
Query:   56 EYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDG--------KKMKVPLNSSDKLFKEIRDLNFEVVVQVLRQKATSMKQDYXXXXXXXXXXXXLKDFVKKLNSLP----EMTXHINLAQHLSTFTSKPSFLGQLDMEHXIIEAXXYD 775
            EY L ++P D D+LS E + A KE  ++GD +S +H AK +  L+  +G IP +  KG+ + +VA ++ RM+ E   S + +  P  + L+L+DR VD++TP+ SQLTYEGL+DE   I N  V+L       ++Q G        +  K+ LNS+++L+ EIRD NF  V  VL +KA  +   +            +K FV +L  +      +  H ++A+ +   T+   F  +L +E   +     D
Sbjct:  139 EYSLDLIPFDGDLLSMESESAFKECYLEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSV-FPVFDNLLLLDRNVDLLTPLASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGGGKDLPTEAKKLQLNSAEELYAEIRDKNFNAVGSVLSKKAKIISAAF-EERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTD 388          
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VP33A_MOUSE (Vacuolar protein sorting-associated protein 33A OS=Mus musculus GN=Vps33a PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.252e-30
Identity = 82/253 (32.41%), Postives = 133/253 (52.57%), Query Frame = 2
Query:   56 EYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDG---------KKMKVPLNSSDKLFKEIRDLNFEVVVQVLRQKATSMKQDYXXXXXXXXXXXXLKDFVKKLNSLP----EMTXHINLAQHLSTFTSKPSFLGQLDMEHXIIEAXXYD 775
            EY L ++P D D+LS E + A KE  ++GD +S +H AK +  L+  +G IP +  KG+ + +VA ++ RM+ E   S + +  P  + L+L+DR VD++TP+ SQLTYEGL+DE   I N  V+L       ++Q G         +  K+ LNS+++L+ EIRD NF  V  VL +KA  +   +            +K FV +L  +      +  H ++A+ +   T+   F  +L +E   +     D
Sbjct:  139 EYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSV-FPVFDNLLLLDRNVDLLTPLASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGSGGKDLPTEAKKLQLNSAEELYAEIRDKNFNAVGSVLSKKAKIISAAF-EERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTD 389          
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VP33A_HUMAN (Vacuolar protein sorting-associated protein 33A OS=Homo sapiens GN=VPS33A PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.958e-30
Identity = 83/251 (33.07%), Postives = 134/251 (53.39%), Query Frame = 2
Query:   56 EYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQ-DGKK------MKVPLNSSDKLFKEIRDLNFEVVVQVLRQKATSMKQDYXXXXXXXXXXXXLKDFVKKLNSLP----EMTXHINLAQHLSTFTSKPSFLGQLDMEHXIIEAXXYD 775
            EY L ++P D D+LS E + A KE  ++GD +S +H AK +  L+  +G IP +  KG+ + +VA ++ RM+ E   S + +  P  + L+L+DR VD++TP+ +QLTYEGL+DE   I N  V+L       ++Q DG K       K+ LNS+++L+ EIRD NF  V  VL +KA  +   +            +K FV +L  +      +  H ++A+ +   T+   F  +L +E   +     D
Sbjct:  139 EYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMIRMKREFTGSQNSI-FPVFDNLLLLDRNVDLLTPLATQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGDGGKDLPTEAKKLQLNSAEELYAEIRDKNFNAVGSVLSKKAKIISAAF-EERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTD 387          
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VP33B_BOVIN (Vacuolar protein sorting-associated protein 33B OS=Bos taurus GN=VPS33B PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.528e-29
Identity = 84/258 (32.56%), Postives = 136/258 (52.71%), Query Frame = 2
Query:    2 ACEKILEEEKGHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLRQKATSMKQDYXXXXXXXXXXXXLKDFV-KKLNSLPE----MTXHINLAQHLSTFTSKPSFLGQLDMEHXIIE 760
            ACE +LEEE  +  ++  E+   ++PLD D+LS EL    +++ ++GD      +A+A+H L   +G  PN    G+ +    E+  R++ EE         PEI  + L+DR+VD VT +CSQ+ YEGLVD+  RI  GSV+    +  +     K +KV LN+ DK+F EIR+ +F  V   L QKA +++  Y            +K+FV ++L  L +    ++ HI   + +    +K  F   +  EH ++E
Sbjct:  122 ACEMVLEEEGVYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTLAQALHLLSTLYGPFPNCYGIGRCAKMSYELWKRLEEEEDGETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSD----KSLKVLLNAEDKVFNEIRNEHFSNVFGFLSQKARNLQAQY--DRRRGMDIKQMKNFVSQELKGLKQEHRLLSLHIGACESIMKKKTKQDFQELIKTEHALLE 372          
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VP33B_HUMAN (Vacuolar protein sorting-associated protein 33B OS=Homo sapiens GN=VPS33B PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.404e-29
Identity = 83/258 (32.17%), Postives = 135/258 (52.33%), Query Frame = 2
Query:    2 ACEKILEEEKGHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLRQKATSMKQDYXXXXXXXXXXXXLKDFV-KKLNSLPE----MTXHINLAQHLSTFTSKPSFLGQLDMEHXIIE 760
            ACE +LEEE  +  ++  E+   ++PLD D+LS EL    +++ ++GD      +A+A+H L   +G  PN    G+ +    E+   ++ EE         PEI  + L+DR+VD VT +CSQ+ YEGLVD+  RI  GSV+    +  +     K +KV LN+ DK+F EIR+ +F  V   L QKA +++  Y            +K+FV ++L  L +    ++ HI   + +    +K  F   +  EH ++E
Sbjct:  122 ACEMVLEEEGIYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIGRCAKMAYELWRNLEEEEDGETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSD----KSLKVLLNAEDKVFNEIRNEHFSNVFGFLSQKARNLQAQY--DRRRGMDIKQMKNFVSQELKGLKQEHRLLSLHIGACESIMKKKTKQDFQELIKTEHALLE 372          
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VP33B_RAT (Vacuolar protein sorting-associated protein 33B OS=Rattus norvegicus GN=Vps33b PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.446e-29
Identity = 82/258 (31.78%), Postives = 136/258 (52.71%), Query Frame = 2
Query:    2 ACEKILEEEKGHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLRQKATSMKQDYXXXXXXXXXXXXLKDFV-KKLNSLPE----MTXHINLAQHLSTFTSKPSFLGQLDMEHXIIE 760
            ACE +LEEE  +  ++  E+   ++PLD D+LS EL    +++ ++GD      +A+A+H L   +G  PN    G+ +    ++  +++ EE         PEI  + L+DR+VD VT +CSQ+ YEGLVD+  RI  GSV+    +  +     K +KV LN+ DK+F EIR+ +F  V   L QKA +++  Y            +K+FV ++L  L +    ++ HI   + +    +K  F   +  EH ++E
Sbjct:  122 ACEMVLEEEGVYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIGRCTKMSYDLWRKLEEEEDSETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSD----KSLKVLLNAEDKVFSEIRNEHFSNVFGFLSQKARNLQAQY--DRRRGMDIKQMKNFVSQELKGLKQEHRLLSLHIGACESIMKKKTKQDFQELIKTEHALLE 372          
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VP33B_MOUSE (Vacuolar protein sorting-associated protein 33B OS=Mus musculus GN=Vps33b PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.446e-29
Identity = 82/258 (31.78%), Postives = 136/258 (52.71%), Query Frame = 2
Query:    2 ACEKILEEEKGHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLRQKATSMKQDYXXXXXXXXXXXXLKDFV-KKLNSLPE----MTXHINLAQHLSTFTSKPSFLGQLDMEHXIIE 760
            ACE +LEEE  +  ++  E+   ++PLD D+LS EL    +++ ++GD      +A+A+H L   +G  PN    G+ +    ++  +++ EE         PEI  + L+DR+VD VT +CSQ+ YEGLVD+  RI  GSV+    +  +     K +KV LN+ DK+F EIR+ +F  V   L QKA +++  Y            +K+FV ++L  L +    ++ HI   + +    +K  F   +  EH ++E
Sbjct:  122 ACEMVLEEEGVYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIGRCAKMSYDLWRKLEEEEDSETKGRK-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSD----KSLKVLLNAEDKVFSEIRNEHFSNVFGFLSQKARNLQAQY--DRRRGMDIKQMKNFVSQELKGLKQEHRLLSLHIGACESIMKKKTKQDFQELIKTEHALLE 372          
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VPS33_SCHPO (Vacuolar protein sorting-associated protein 33 OS=Schizosaccharomyces pombe GN=vps33 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.086e-22
Identity = 80/261 (30.65%), Postives = 124/261 (47.51%), Query Frame = 2
Query:    8 EKILEEEKGHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTL----VLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQ--QDGKKMKVPL-NSSDKLFKEIRDLNFEVVVQVLRQKATSMKQDYXXXXXXXXXXXXLKDFVKKLNSL----PEMTXHINLAQHLSTFTSKPSFLGQLDMEHXII 757
            E +L+EE     + + E+PL+ VPLD+D+LS EL     E       S       A+   E T G  P V  +G  + ++ E+L +   EE          EI+ L    +L+DR +D +TP  +QLTY G +DE L I   +V+L +S++   +    G   K  L +SS ++ KEIRD+NF  +   L + A  +  D+            ++DFV KL SL      +  H  LA+ L   T    F   L ++H ++
Sbjct:  111 ETVLQEEGVFGELLVTEWPLHAVPLDKDLLSLELGPEKLE------ESLLQRSTDALIDFERTHGRFPRVSGRGPYAAKMLELLEKTYQEEATINFGKVEGEISALYDSVLLVDRSLDRITPFLTQLTYFGFLDEILGIQQMNVKLPSSLVNRNEASNTGPMKKFSLSSSSSQITKEIRDINFNCIGPYLSKIARKLSSDF-EGRRQAKTVNQIRDFVSKLGSLQSEHTSLNIHTGLAETLVQHTKNNYFQKLLQLQHLLV 364          
BLAST of EY650116 vs. ExPASy Swiss-Prot
Match: VP33A_DROME (Vacuolar protein sorting-associated protein 33A OS=Drosophila melanogaster GN=car PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.070e-18
Identity = 58/188 (30.85%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   74 VPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDA-----------------------SIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLRQKA 568
            +PLD D++S E+  A ++  VDGD SS +  A  + +L+  +G IP +  KG+ + RV E   ++  +E  +L + +   ++ L+L+DR +D+++P+ +QLTYEGL+DEF  I    + L A                       S++G    D +K  + L+S ++L+ E+R+ +F  V ++L +KA
Sbjct:  146 LPLDVDLVSMEMPNAFRDVSVDGDTSSLYQAAVGLVQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGRDER-TLYNGDKGVVDQLILLDRSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLPAENFPSDGALPGGGGSGPRVEESQSLLG----DTEKKTILLHSGEQLYAELRNKHFNEVTKLLARKA 328          
The following BLAST results are available for this feature:
BLAST of EY650116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPS33_ARATH4.880e-10572.52Vacuolar protein sorting-associated protein 33 hom... [more]
VP33A_RAT2.357e-3032.54Vacuolar protein sorting-associated protein 33A OS... [more]
VP33A_MOUSE5.252e-3032.41Vacuolar protein sorting-associated protein 33A OS... [more]
VP33A_HUMAN8.958e-3033.07Vacuolar protein sorting-associated protein 33A OS... [more]
VP33B_BOVIN1.528e-2932.56Vacuolar protein sorting-associated protein 33B OS... [more]
VP33B_HUMAN3.404e-2932.17Vacuolar protein sorting-associated protein 33B OS... [more]
VP33B_RAT4.446e-2931.78Vacuolar protein sorting-associated protein 33B OS... [more]
VP33B_MOUSE4.446e-2931.78Vacuolar protein sorting-associated protein 33B OS... [more]
VPS33_SCHPO3.086e-2230.65Vacuolar protein sorting-associated protein 33 OS=... [more]
VP33A_DROME2.070e-1830.85Vacuolar protein sorting-associated protein 33A OS... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-D06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650116 ID=EY650116; Name=EY650116; organism=Citrus sinensis; type=EST; length=874bp
TGCTTGTGAGAAGATTCTTGAGGAGGAAAAGGGGCATAACTTGATGACTA
TTGGGGAATACCCATTGTACATGGTTCCATTGGATGAGGATGTTTTATCA
TTTGAACTTGATCTTGCTCATAAAGAATGGCAAGTTGATGGTGATGCAAG
TTCCCAATGGCACATTGCAAAAGCAATTCACAAGCTTGAGTTTACTTTTG
GATTAATACCAAATGTGAGAGCCAAGGGAAAAGCATCAGTACGTGTTGCA
GAAATTCTGAACCGCATGCAGACAGAGGAACCAGTTTCCTTATCTGATAT
GAACATCCCAGAGATAAATACACTTGTCCTTATCGATAGAGAGGTTGACA
TGGTTACTCCCATGTGTTCTCAATTAACATATGAAGGACTGGTGGATGAG
TTTCTGCGTATCAATAATGGTTCTGTGGAGCTTGACGCATCAATTATGGG
TGCACAACAACAAGATGGAAAAAAGATGAAAGTTCCACTTAATTCAAGTG
ACAAGCTGTTCAAGGAAATACGGGATCTCAACTTCGAAGTTGTTGTCCAG
GTTCTGCGTCAAAAAGCGACATCCATGAAACAGGACTATACTGAGGTGAC
CACAATGTCTCANACAGTTTCNGAACTAAAGGACTTTGTCAAAAAGCTCA
ACTCATTGCCAGAAATGACTANGCACATAAATCTCGCTCAGCACCTGTCA
ACATTTACATCAAAGCCATCATTTCTTGGGCAACTTGACATGGAACACAN
CATTATTGAGGCTCANNAGTATGACATATGTTTCGAGTTATAGAAGAGAT
GATCCATNAGCAGGAGCCTCTTNACAAGTCCTACCCTTGCTGATCCTATT
TTCTGTACAAATTCAGGGNTGCCA
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