EY650055

Overview
NameEY650055
Unique NameEY650055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY650055_ssr102 microsatellite EY650055_ssr102:102..111. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: MSI4_ARATH (WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3)

HSP 1 Score: 369.392 bits (947), Expect = 1.496e-101
Identity = 174/203 (85.71%), Postives = 189/203 (93.10%), Query Frame = 1
Query:   19 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLWSXQEHVSALAADPRSAKS 627
            SVD++Y+QWK LVP+LYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWD E QP RHAVL AA+S PDLILTGHQ+ AEFALAMCPTEP+VLSG KDKS+VLWS Q+H++ +  D +S+ S
Sbjct:   63 SVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGS 265          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: MSI5_ARATH (WD-40 repeat-containing protein MSI5 OS=Arabidopsis thaliana GN=MSI5 PE=2 SV=2)

HSP 1 Score: 293.893 bits (751), Expect = 7.990e-79
Identity = 142/210 (67.62%), Postives = 168/210 (80.00%), Query Frame = 1
Query:    1 RKGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLWSXQEHVSALAADPRSAKST 630
            ++  + +VDD Y+QWK+L+P+LYD   NH LVWPSLSCRWGPQLEQA  K  QRLYLSEQT+GSVPNTLVIANCE V           Q NE+A SPFVKK+KTIIHPGEVNRIRELPQNSKIVATHTDSPD+LIW+ E QP R+AVL A DS PDL+L GHQ+ AEFALAMCPTEP+VLSG KDKS++LW+ Q+H++   +D +S  S+
Sbjct:   47 QQSQKATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSKT-QRLYLSEQTNGSVPNTLVIANCETVN---------RQLNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNIQDHITMAGSDSKSPGSS 246          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: MSI1_SOLLC (WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum GN=MSI1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19
Identity = 66/198 (33.33%), Postives = 100/198 (50.51%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+  W P  E+ + K+   Q++ L   T  + PN L++A    V+  +  AE+ ++  ++ RS F         V+  + I H GEVNR R +PQN  I+AT T S +V ++D    P +  +  A   +PDL L GH             + ++LSGS D  + LW
Sbjct:   14 ERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSENEPNYLMLAQ---VQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGAC--NPDLRLRGHSTEGYGLSWSQFKQGHLLSGSDDSHICLW 206          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: MSI1_ARATH (WD-40 repeat-containing protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.447e-19
Identity = 66/198 (33.33%), Postives = 98/198 (49.49%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+  W P  E+ + K+   Q++ L   T  S PN L++A  +V  P         Q++++ RS F         V+  + I H GEVNR R +PQN  I+AT T + +V ++D    P +  +  A   +PDL L GH             + ++LSGS D  + LW
Sbjct:   14 ERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSESEPNYLMLA--QVQLPLDDTESEARQYDDD-RSEFGGFGCATGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGAC--NPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLW 206          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_NEUCR (Histone acetyltransferase type B subunit 2 OS=Neurospora crassa GN=hat-2 PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.070e-18
Identity = 70/207 (33.82%), Postives = 103/207 (49.76%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSVPNTLVIANCEVVK-----PRVAAAE--HISQFNEEARS--PFVKKFK---TIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCP-TEPYVLSGSKDKSMVLWSXQEH 588
            +R +++ Y  WK   P LYD + +  L WP+L+ +W P ++    K+    RL L   T    PN L IA  E+ K     PR    E   I  +  +A S  P   +FK    I HPGEVN+ R  PQN  I+AT      VLI+D      +H++  +    P L L GH+E   F L   P  E  +++GS+DK+++LW  + +
Sbjct:   23 QRLINEEYKIWKKNSPFLYDMMLSTALEWPTLTTQWFPDVKNPKDKSHTVHRLLLGTHTAEGKPNYLQIAEVEIPKMVELNPRDYDEERGEIGGYGSKASSGEPLCIRFKITQKIDHPGEVNKARYQPQNPDIIATLAVDGRVLIFD----RTKHSITPSGTPSPQLELIGHKEEG-FGLNWNPHEEGCLVTGSEDKTVLLWDLKTY 224          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: MSI2_ARATH (WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana GN=MSI2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 63/189 (33.33%), Postives = 93/189 (49.21%), Query Frame = 1
Query:   22 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQA----TYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCP-TEPYVLSGSKDKSMVLW 573
            V++ ++ WK   P LYD L +H L WPSL+  W P         +Y    +L L   T GS  + L++A  +VV P   A   I   N++   P V+  + I   GEVNR R +PQ   +V   T   +V ++D        A    ++  PDL L GH +   + L+  P  E Y+LSGS+D+ + LW
Sbjct:   14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSGSAQDFLMVA--DVVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFD---YAKHAAKSQTSECDPDLRLVGHDKEG-YGLSWSPFKEGYLLSGSQDQKICLW 196          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_CRYNE (Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans GN=HAT2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 60/203 (29.56%), Postives = 96/203 (47.29%), Query Frame = 1
Query:   16 RSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQA--TYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA-----------EHISQFNEEARSPF-VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLWSXQ 582
            ++++++Y  WK   P LYD +  H L WPSL+C+W P +     T    QRL +   T G   + L+IA  EV+ P+  A            E   +      SP  ++  +TI H GEVNR R +PQN +++AT T + +V ++D      +       +  PD+ L G  +           E ++LS S+D ++  W  Q
Sbjct:   23 QAINEQYKVWKKNTPFLYDTVITHALTWPSLTCQWLPDITDVPDTDYTSQRLIIGTHTSGQANDHLIIA--EVLLPKKGAGISDKALADLYDEEKQEIGSYTASPARIRAIQTINHAGEVNRARYMPQNPELIATKTVTGEVYVFDRTKHESKAPA--NGECKPDIRLKGQTKEGYGLSWNALKEGHILSASEDTTIGHWDIQ 221          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_ASPOR (Histone acetyltransferase type B subunit 2 OS=Aspergillus oryzae GN=hat2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 62/204 (30.39%), Postives = 100/204 (49.02%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE-----------ARSPFVKKF---KTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCP-TEPYVLSGSKDKSMVLW 573
            E+ +++ Y  WK   P LYD + +  L WP+L+ +W P  ++   K  +  RL L   T     N L IA+ ++  P   +A +   ++EE            ++P   KF   + I H GEVN+ R  PQN  ++AT      V+IWD      +H  L     +P + L GH +   F L+  P T  ++++GS+DK++ LW
Sbjct:   22 EKVINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQEVPDKPYSTHRLLLGTHTSSDAQNYLQIAHVQLPNP---SAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQNPNVIATMCTDGRVMIWDRS----KHPSLPTGTVNPQMELLGHTKEG-FGLSWSPHTAGHLVTGSEDKTVRLW 217          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_DANRE (Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.866e-18
Identity = 68/199 (34.17%), Postives = 97/199 (48.74%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E  + F         ++    I H GEVNR R +PQN  I+AT T + DVL +D    P +     + D  PDL L GHQ+   + L+  P     +LS S D ++ LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDE-QNHLVIASAQI--PNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPD--PSGDCSPDLRLRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLW 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP4_MOUSE (Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=4)

HSP 1 Score: 91.2781 bits (225), Expect = 7.866e-18
Identity = 68/198 (34.34%), Postives = 100/198 (50.51%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K  +  RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+   + L+  P    ++LS S D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPD--PSGECNPDLRLRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLW 205          
The following BLAST results are available for this feature:
BLAST of EY650055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
MSI4_ARATH1.496e-10185.71WD-40 repeat-containing protein MSI4 OS=Arabidopsi... [more]
MSI5_ARATH7.990e-7967.62WD-40 repeat-containing protein MSI5 OS=Arabidopsi... [more]
MSI1_SOLLC1.872e-1933.33WD-40 repeat-containing protein MSI1 OS=Solanum ly... [more]
MSI1_ARATH5.447e-1933.33WD-40 repeat-containing protein MSI1 OS=Arabidopsi... [more]
HAT2_NEUCR2.070e-1833.82Histone acetyltransferase type B subunit 2 OS=Neur... [more]
MSI2_ARATH6.022e-1833.33WD-40 repeat-containing protein MSI2 OS=Arabidopsi... [more]
HAT2_CRYNE6.022e-1829.56Histone acetyltransferase type B subunit 2 OS=Cryp... [more]
HAT2_ASPOR6.022e-1830.39Histone acetyltransferase type B subunit 2 OS=Aspe... [more]
RBBP7_DANRE7.866e-1834.17Histone-binding protein RBBP7 OS=Danio rerio GN=rb... [more]
RBBP4_MOUSE7.866e-1834.34Histone-binding protein RBBP4 OS=Mus musculus GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-F10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650055 ID=EY650055; Name=EY650055; organism=Citrus sinensis; type=EST; length=873bp
CGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACACAATGGAAGTC
CTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAACCTCGTTTGGC
CCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAGCTACATACAAG
AATCGCCAACGTCTTTACCTTTCTGAACAGACTGATGGCAGTGTTCCAAA
TACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCGAGTTGCAGCTG
CAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCACCCTTTGTAAAG
AAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGAATAAGAGAACT
CCCACAGAACAGTAAAATAGTAGCCACACACACTGATAGTCCTGATGTCC
TCATTTGGGATGGTGAGGCACAACCTANTCGCCATGCTGTCTTANGAGCT
GCTGATTCTCATCCAGATCTGATATTGACCGGCCATCAAGAATATGCTGA
ATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCTCTCTGGAAGCA
AGGATAAGTCAATGGTTTTATGGAGCATNCAAGAACATGTCTCCGCTTTG
GCAGCAGACCCCAGGTCTGCAAAATCTACAGCTCTTGGCGTGCCAACTCT
AAAATGCTTNCAGAAGTGTGGGAATGGGGATAACCTCTANAGAGCCTTCT
ATGGGGCACGAAGTAATACCTAGGCATGAGACCTGTGGAAAACGTCAGTT
CTGTCATCAGGCACAGAGTTCTGAGTGTAGTGATGATTCTGCCTATCTAT
GGATGCCAGACTGCTCTCTNCACTGTCAGGNTGAGAAGCCATATGCGAAT
NCATGGGGTGATGGAATCCCAGA
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