EY650041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.836e-67 Identity = 137/226 (60.62%), Postives = 152/226 (67.26%), Query Frame = 3 Query: 39 SLTIPTNLSKPLLKPRSNSQLSHA-KLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXESLMVKLV 713 SLTIP NL +L PRSN L+ + S C ++AF P PAVADISGLTPCK+SKQFAKR YAP+SAPALA+ A +EKTKRRFDNYGKYGLLCGS GLPHLIV+GDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLAS ++F+GF WPVAA E L L+ Sbjct: 2 SLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKSSSSTPQS-------MKAFSAAVALSSILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLI 217
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.976e-67 Identity = 139/226 (61.50%), Postives = 148/226 (65.49%), Query Frame = 3 Query: 39 SLTIPTNLSKPLL-KPRSNSQLSHAKLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXESLMVKLV 713 S TIPTNL KPL KP+ S S A SK + A P A+ADI+GLTPCKESKQFAKR YA DSAPALAIKATMEKTK+RFDNYGKYGLLCGS GLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI EKKP KEIIIDVPLAS L+F+GFSWPVAA E L +LV Sbjct: 2 SFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.828e-65 Identity = 135/231 (58.44%), Postives = 149/231 (64.50%), Query Frame = 3 Query: 39 SLTIPTNLSKPL--LKPRSNSQLSHAKLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXESLMVKLVQGTL 725 S TI T+ +PL +S+ S +K++ I C L A PA ADISGLTPCKESKQFAKR YAPDSAPALAIKATMEKTKRRFDNYGK GLLCGS GLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI EKKP KEIIIDVPLA+ L+F+GFSWPVAA E L +L+ T+ Sbjct: 2 SFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAALALSSILVSSTVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELIDPTV 232
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 1.966e-61 Identity = 114/156 (73.08%), Postives = 128/156 (82.05%), Query Frame = 3 Query: 246 PQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXESLMVKLV 713 P PA ADI+GLTPCKESK FAKR YAPDSAPALAI+AT++KTKRRF+NYGK+GLLCGS GLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIA+SGEKKPAM+EIIIDV LA+ ++ +GF WPVAA E + LV Sbjct: 72 PPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLV 227
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_CHLRE (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAF PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.608e-39 Identity = 88/164 (53.66%), Postives = 104/164 (63.41%), Query Frame = 3 Query: 246 PQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQR----HWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXESLMVKLVQGTL 725 P A+ADI+GLTPC ESK +AK Y DSAPA+A+KATME+TK RF NY K GLLCG+ GLPHLI H GE P FLY+AG+IG+VGR YLIA+ GE KP KEIIIDVPLA+ L ++G WP+AA E L +GTL Sbjct: 57 PSAAMADIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKEIIIDVPLATKLAWQGAGWPLAAVQE-----LQRGTL 215
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_PORYE (Photosystem I reaction center subunit III OS=Porphyra yezoensis GN=psaF PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.980e-37 Identity = 76/149 (51.01%), Postives = 95/149 (63.76%), Query Frame = 3 Query: 246 PQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXE 692 P A A+++GL PCK+S F KR Y D+ PALA+ +EKTK RF YG+ GLLCG+ GLPHLI G G+F+ PGLLFLYI GWIGWVGR YL++++ KP KEII+DVPLA + GF+WP+AA E Sbjct: 15 PIIANAEVAGLVPCKDSAAFNKRMVNSVKKLQARLAKYDADTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAIKFMSSGFAWPLAAWQE 163
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_GUITH (Photosystem I reaction center subunit III OS=Guillardia theta GN=psaF PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.410e-37 Identity = 75/149 (50.34%), Postives = 92/149 (61.74%), Query Frame = 3 Query: 246 PQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXE 692 P + AD++GL PCK SK+F +R Y P++ P LA++ + KTK RF YG GLLCG+ GLPHLI G H GEF+ PGL FLYIAGWIGWVGR+Y+ S KP KEIIIDVP+A + G+ WP AA E Sbjct: 17 PVASHADVAGLVPCKNSKEFQRRLDSSVKKLESRLSKYEPNTPPYLALETQINKTKNRFTQYGNAGLLCGTDGLPHLIADGRWSHAGEFMVPGLFFLYIAGWIGWVGRNYVQFASQTDKPTEKEIIIDVPVALSFISTGYIWPFAAFKE 165
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_PORPU (Photosystem I reaction center subunit III OS=Porphyra purpurea GN=psaF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.676e-36 Identity = 73/144 (50.69%), Postives = 93/144 (64.58%), Query Frame = 3 Query: 261 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXE 692 A+++GL PCK+S F KR Y ++ PALA+ +EKTK RF YG+ GLLCG+ GLPHLI G G+F+ PGLLFLYI GWIGWVGR YL++++ KP KEII+DVPLA + GF+WP+AA E Sbjct: 24 AEVAGLIPCKDSAAFNKRMVNSVKKLQARLAKYDANTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAVKFMSSGFAWPLAAWQE 167
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_CYAPA (Photosystem I reaction center subunit III OS=Cyanophora paradoxa GN=psaF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.876e-36 Identity = 77/154 (50.00%), Postives = 95/154 (61.69%), Query Frame = 3 Query: 249 QPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXESLMVKL 710 +P AD++GL PC +S F +R Y P SAPA A++ ++KT++RFD Y GLLCG+ GLPHLI G H GEF PGLLFLYIAG+IGW GRSYL A++ KEIIID+P+A V KGF WP+AA E KL Sbjct: 21 RPVRADVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKTQQRFDKYRNSGLLCGADGLPHLITDGRWSHAGEFTIPGLLFLYIAGFIGWSGRSYLQAVAASDNSTEKEIIIDIPVALQSVSKGFVWPLAALQEFSSGKL 174
BLAST of EY650041 vs. ExPASy Swiss-Prot
Match: PSAF_GRATL (Photosystem I reaction center subunit III OS=Gracilaria tenuistipitata var. liui GN=psaF PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35 Identity = 75/153 (49.02%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 255 AVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSXGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASXLVFKGFSWPVAATXESLMVKLV 713 A + +GLT C+ES F KR Y ++ PA+A++ + KTK RF+ Y K G+LCG+ GLPHLI G H GEF+ PG+LFLYI GWIGWVGR YL IS KP KEII+DVPLA GF+WP+AA E +LV Sbjct: 24 AEVETAGLTKCQESPAFTKRLNNSVKKLETRLAKYDANTPPAIALQTQIIKTKIRFNKYAKSGILCGTDGLPHLITDGRWNHAGEFMIPGVLFLYITGWIGWVGRGYLRDISQTTKPTEKEIILDVPLALKYCLSGFTWPLAAIKELTSGELV 176 The following BLAST results are available for this feature:
BLAST of EY650041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650041 ID=EY650041; Name=EY650041; organism=Citrus sinensis; type=EST; length=872bpback to top |