EY649943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PAB2_SCHPO (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe GN=pab2 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.600e-37 Identity = 83/155 (53.55%), Postives = 106/155 (68.39%), Query Frame = 3 Query: 186 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 647 + K+L +MK+R+ E+E EA LR MQ +++ E T A + +KE +D++S+YVGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF G PKGFAY+EF E V NALLLN + LH R LKV+ KRTN+PGM + RGR RGR Sbjct: 8 DTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNE---------TEALRNDKESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHERPLKVTPKRTNVPGMSRGRGRGRGRGRGRGR 153
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PABP2_DROPS (Polyadenylate-binding protein 2 OS=Drosophila pseudoobscura pseudoobscura GN=Pabp2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.744e-33 Identity = 78/181 (43.09%), Postives = 111/181 (61.33%), Query Frame = 3 Query: 201 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM------------------------KQFRGRRPNTFGFRGRMPFIA 662 +LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET GRQ+KV +KRTN PG+ FRG R G+RGR + A Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARASRACCHSTFRGARRAIRGYRGRANYYA 223
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PABP2_DROME (Polyadenylate-binding protein 2 OS=Drosophila melanogaster GN=Pabp2 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.278e-33 Identity = 74/159 (46.54%), Postives = 106/159 (66.67%), Query Frame = 3 Query: 201 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRMPFIAWC 668 +LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET GRQ+KV +KRTN PG+ +F RG A C Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACC 201
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PABP2_MOUSE (Polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1 PE=2 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 1.250e-31 Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 3 Query: 201 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM---------KQFRGRRPNTFGFRGR 647 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+ GRQ+KV KRTN PG+ ++R R N R R Sbjct: 114 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTTNYNSSRSR 275
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PAB2A_XENLA (Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-A PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.250e-31 Identity = 71/137 (51.82%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 201 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 599 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+ GRQ+KV KRTN PG+ Sbjct: 109 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 245
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PABP2_HUMAN (Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.632e-31 Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 3 Query: 201 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK---------QFRGRRPNTFGFRGR 647 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+ GRQ+KV KRTN PG+ ++R R N R R Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSR 279
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PABP2_BOVIN (Polyadenylate-binding protein 2 OS=Bos taurus GN=PABPN1 PE=1 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.632e-31 Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 3 Query: 201 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK---------QFRGRRPNTFGFRGR 647 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+ GRQ+KV KRTN PG+ ++R R N R R Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSR 279
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PAB2B_XENLA (Polyadenylate-binding protein 2-B OS=Xenopus laevis GN=pabpn1-B PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.632e-31 Identity = 71/137 (51.82%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 201 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 599 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+ GRQ+KV KRTN PG+ Sbjct: 108 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 244
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PABP2_XENTR (Polyadenylate-binding protein 2 OS=Xenopus tropicalis GN=pabpn1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.750e-31 Identity = 70/137 (51.09%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 201 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 599 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ +L L+E+ GRQ+KV KRTN PG+ Sbjct: 109 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 245
BLAST of EY649943 vs. ExPASy Swiss-Prot
Match: PABP2_DICDI (Polyadenylate-binding protein 2 OS=Dictyostelium discoideum GN=pabpn1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.958e-30 Identity = 70/156 (44.87%), Postives = 98/156 (62.82%), Query Frame = 3 Query: 201 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD-------SSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRG 644 +LE+MKKR +E+EEEA L E+Q +E + ++EE+DSRS+YVGNVDY T +++ +FQSCGTVNR+TIL+DK G PKG YVEFV +++ NA+ LN++ + RQLK++ KRTN+P + P GFRG Sbjct: 43 ELEEMKKRFREMEEEAKKLTELQNNLESNITGNNGVGIGGNIGGGGGLMNTDQEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESIINAMALNDSFFNERQLKITPKRTNLPYYMRQGVLPPGRGGFRG 198 The following BLAST results are available for this feature:
BLAST of EY649943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649943 ID=EY649943; Name=EY649943; organism=Citrus sinensis; type=EST; length=876bpback to top |