EY649874
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.381e-68 Identity = 154/257 (59.92%), Postives = 167/257 (64.98%), Query Frame = 3 Query: 111 MPSHPNFPFSLPRWIIELFRSKKVXXXXXXXXXXXXXXXXXXPISN--------HNFECYACTQVGVPVFHSTSCDQAHQPEWEASAGSSLVPIQARSKILGPKDGR--PASATFAHVFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCGAP-CLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCRKLVWDPRAIASHYVRSLKDFGSTFS*FSPXLKLCFG*WVPQL*R-XKIRMI 845 MPSHPNF F RWI LF K S+ + ECYACTQVGVP FHSTSCDQAH PEW ASAGSSLVPIQ S + P R F V DPRSKRVQR NRA LLARGM+LAVDPLFFYALSIGR P CLYMDGA AA+VTVLRTC+DAVHL+H+WLQFRLAYVSRESLVVGC KLVWDPRAIASHY RSL F P + F VP+L R K+++I Sbjct: 1 MPSHPNFIF---RWI-GLFSDKFRRQTTGIDENSNLQINGGDSSSSGSDETPVLSSVECYACTQVGVPAFHSTSCDQAHAPEWRASAGSSLVPIQEGS-VPNPARTRFRRLKGPFGEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVLRTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYARSLTGFWFDVIVILPVPQAVFWLVVPKLIREEKVKLI 252
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.051e-18 Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 399 DGRPASATFAH-VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCRKLVWDPRAIASHYVRS 743 DG S + H + DP S V N FL+ ++L +DP +FY +G G CL +D +LAA VT RT D HL H++++FR A+V+R S V G +LV D R IA Y+++ Sbjct: 28 DGSQFSVLWRHQILDPDSNIVTYWNHVFLITSILALFLDPFYFYVPYVG--GPACLSIDISLAATVTFFRTVADIFHLLHIFMKFRTAFVARSSRVFGRGELVMDSREIAMRYLKT 141 HSP 2 Score: 29.6462 bits (65), Expect = 3.051e-18 Identity = 13/29 (44.83%), Postives = 18/29 (62.07%), Query Frame = 2 Query: 728 SLRAVSQRFWXDVFVILPVPQAVFWLVGP 814 ++R + F DV +LP+PQ V WLV P Sbjct: 135 AMRYLKTDFLIDVAAMLPLPQLVIWLVIP 163
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.201e-16 Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 3 Query: 285 VPVFHSTSCDQAHQPEWEASAGSSLVPIQARSKILGPKDGR----PASATFAH--VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCG-APCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCRKLVWDPRAIASHYVRS 743 VP+F ST+ Q ++P ++++++ P+ GR P + + DP V + NR FL ++L VDPLFF+ S+ R G + C+ D L ++T RT D ++ H+ ++FR AYVSR S V G +LV DP+ IA Y+RS Sbjct: 26 VPLFKSTTAPFMKQ---------EVLPKKSKTRLKIPRFGRFKVFPENFEIERDKILDPGGDAVLQWNRVFLFWCLVALYVDPLFFFLSSVKRIGRSSCMTTDLKLGIVITFFRTLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLRS 176 HSP 2 Score: 25.409 bits (54), Expect = 1.201e-16 Identity = 11/29 (37.93%), Postives = 15/29 (51.72%), Query Frame = 2 Query: 734 RAVSQRFWXDVFVILPVPQAVFWLVGPPI 820 R + F D+ LP+PQ V W + P I Sbjct: 172 RYLRSDFIVDLIACLPLPQIVSWFILPSI 200
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.202e-16 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 432 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLA 659 + DPRSK V+ N+ FLL L VDPLF Y LS+ CL +DG LA VT LR+ D +HL+++W+QF++A Sbjct: 79 ILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDT-CMCLLVDGWLALTVTALRSMTDLLHLWNIWIQFKIA 153 HSP 2 Score: 34.6538 bits (78), Expect = 1.202e-16 Identity = 13/25 (52.00%), Postives = 20/25 (80.00%), Query Frame = 2 Query: 752 FWXDVFVILPVPQAVFWLVGPPIIE 826 F+ D+FVILP+PQ V W+V P +++ Sbjct: 189 FFFDLFVILPLPQVVLWVVIPSLLK 213
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.269e-15 Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 3 Query: 432 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCRKLVWDPRAIASHYVR 740 +FDP+ K + N+ F+ + ++++VDPLF Y I A C+ +D LA IVT +RT +D+ +LFH+ L+FR AYV+ S V G +LV DP IA Y++ Sbjct: 103 IFDPQDKFLLLCNKLFVASCILAVSVDPLFLYLPFIND-KAKCVGIDRKLAIIVTTIRTVIDSFYLFHMALRFRTAYVAPSSRVFGRGELVIDPAQIAKRYLQ 204 HSP 2 Score: 26.1794 bits (56), Expect = 1.269e-15 Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 734 RAVSQRFWXDVFVILPVPQAVFW 802 R + Q F D+ +LPVPQ + W Sbjct: 201 RYLQQYFIIDLLSVLPVPQIIVW 223
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.270e-15 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 432 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCRKLVWDPRAIASHYV 737 +FDP+ K + NR F+++ ++++VDPLFFY + G+ C+ +D LA T LRT VD +L + LQFR AY++ S V G +LV DP IA Y+ Sbjct: 90 IFDPQDKTLLVWNRLFVISCILAVSVDPLFFYLPIVDNSGSSCIGIDTKLAVTTTTLRTIVDVFYLTRMALQFRTAYIAPSSRVFGRGELVIDPAKIAERYL 191 HSP 2 Score: 22.7126 bits (47), Expect = 1.270e-15 Identity = 8/23 (34.78%), Postives = 13/23 (56.52%), Query Frame = 2 Query: 734 RAVSQRFWXDVFVILPVPQAVFW 802 R +++ F D +LP+PQ W Sbjct: 189 RYLTRYFVVDFLAVLPLPQIAVW 211
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.788e-15 Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 393 PKDGRPASATFAHVFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCRKLVWDPRAIASHYVRS 743 P +S T ++ +P+ +Q N+ FL A ++LA+DPLFFY + I CL +D L ++LRT +DA ++ H+ QFR AY++ S V G +LV D +AIA Y+ S Sbjct: 55 PDHKETSSVTRKNIINPQDSFLQNWNKIFLFACVVALAIDPLFFY-IPIVDSARHCLTLDSKLEIAASLLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSS 170 HSP 2 Score: 24.2534 bits (51), Expect = 2.788e-15 Identity = 12/31 (38.71%), Postives = 18/31 (58.06%), Query Frame = 2 Query: 728 SLRAVSQRFWXDVFVILPVPQAVFWLVGPPI 820 +L+ +S F D+ ILP+PQ V V P + Sbjct: 164 ALKYLSSYFIIDLLSILPLPQIVVLAVIPSV 194
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 2.790e-15 Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 3 Query: 396 KDGRPASATFAHVFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCRKLVWDPRAIASHYVRS 743 +D ++ T ++ +P+ +Q N+ FL A ++LA+DPLFFY + I CL + L +VLRT +DA ++ H+ QFR AY+S S V G +LV DP+AIA Y+ S Sbjct: 56 RDSNSSTTTQKNIINPQGSFLQNWNKIFLFASVIALAIDPLFFY-IPIVDGERHCLNLHRNLEIAASVLRTFIDAFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSS 170 HSP 2 Score: 23.0978 bits (48), Expect = 2.790e-15 Identity = 11/31 (35.48%), Postives = 18/31 (58.06%), Query Frame = 2 Query: 728 SLRAVSQRFWXDVFVILPVPQAVFWLVGPPI 820 +++ +S F D+ ILP+PQ V V P + Sbjct: 164 AIKYLSSYFIIDLLSILPLPQLVVLAVIPNV 194
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.113e-15 Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 3 Query: 432 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCRKLVWDPRAIASHYVR 740 +FDP+ K + N+ F+ + ++++VDPLF Y L + C+ +D LA I T LRT +DA +LFH+ L+FR A+V+ S V G +LV DP IA Y++ Sbjct: 103 IFDPQDKFLLLCNKLFVTSCILAVSVDPLFLY-LPFVKDNEKCIGIDRKLAIIATTLRTVIDAFYLFHMALRFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQ 204 HSP 2 Score: 24.6386 bits (52), Expect = 6.113e-15 Identity = 10/23 (43.48%), Postives = 13/23 (56.52%), Query Frame = 2 Query: 734 RAVSQRFWXDVFVILPVPQAVFW 802 R + Q F D +LP+PQ V W Sbjct: 201 RYLQQYFIIDFLSVLPLPQIVVW 223
BLAST of EY649874 vs. ExPASy Swiss-Prot
Match: CNG20_ARATH (Probable cyclic nucleotide-gated ion channel 20, chloroplastic OS=Arabidopsis thaliana GN=CNGC20 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.339e-14 Identity = 36/103 (34.95%), Postives = 61/103 (59.22%), Query Frame = 3 Query: 432 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRCGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCRKLVWDPRAIASHYVR 740 + +P +K VQ + F L+ +++ +DPLFF+ + + C+ +D + +R+ D + ++ LQFRLAYV+RES VVG +LV P+ IA HY++ Sbjct: 192 IMNPHAKEVQTWTKFFALSCLLAIFIDPLFFFLIKVQEQNK-CIMIDWPMTKAFVAVRSVTDVIFTMNILLQFRLAYVARESTVVGAGQLVSHPKKIALHYLK 293 HSP 2 Score: 27.335 bits (59), Expect = 1.339e-14 Identity = 8/30 (26.67%), Postives = 21/30 (70.00%), Query Frame = 2 Query: 722 RFSLRAVSQRFWXDVFVILPVPQ-AVFWLV 808 + +L + +F+ D+F+++P+PQ + W++ Sbjct: 286 KIALHYLKGKFFLDLFIVMPLPQILILWII 315 The following BLAST results are available for this feature:
BLAST of EY649874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649874 ID=EY649874; Name=EY649874; organism=Citrus sinensis; type=EST; length=917bpback to top |