EY702856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 4.019e-33 Identity = 71/123 (57.72%), Postives = 96/123 (78.05%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDA 469 R LHDALCVL+QTV DSR ++GGG EM+MA V +LA +TPGK++ A+E++++AL +PT IADNAG DSA+L+AQLRA H + AG+D+ G++ DMA LGI+ESF+VK+ VLLS +A Sbjct: 388 RSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEA 510
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 142.124 bits (357), Expect = 4.019e-33 Identity = 71/123 (57.72%), Postives = 96/123 (78.05%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDA 469 R LHDALCVL+QTV DSR ++GGG EM+MA V +LA +TPGK++ A+E++++AL +PT IADNAG DSA+L+AQLRA H + AG+D+ G++ DMA LGI+ESF+VK+ VLLS +A Sbjct: 388 RSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEA 510
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 141.739 bits (356), Expect = 5.249e-33 Identity = 71/123 (57.72%), Postives = 95/123 (77.24%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDA 469 R LHDALCVL+QTV D R ++GGG EM+MA V +LA +TPGK++ A+E+F++AL +PT IADNAG DSA+L+AQLRA H + AG+D+ G++ DMA LGI+ESF+VK+ VLLS +A Sbjct: 388 RSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGHITAGLDMKEGTIGDMAVLGITESFQVKRQVLLSAAEA 510
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 8.953e-33 Identity = 72/123 (58.54%), Postives = 94/123 (76.42%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDA 469 R LHDALCVL+QTV D R ++GGG EM+MA V LA +TPGK++ A+E+F++AL +PT IADNAG DSA+L+AQLRA H + AG+D+ GS+ DMA LGI+ESF+VK+ VLLS +A Sbjct: 388 RSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTMLASRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGRITAGLDMKEGSIGDMAVLGITESFQVKRQVLLSAAEA 510
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 8.953e-33 Identity = 70/123 (56.91%), Postives = 96/123 (78.05%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDA 469 R LHDALCVL+QTV DSR ++GGG EM+MA V +LA +TPGK++ A+E++++AL +PT IADNAG DSA+L+AQLRA H + AG+D+ G++ DM+ LGI+ESF+VK+ VLLS +A Sbjct: 388 RSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEA 510
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.521e-29 Identity = 66/123 (53.66%), Postives = 91/123 (73.98%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDA 469 R +HDALCVL+ TV ++R + G G EM+M+K VDELA TPGKK+ AIE+F++AL IPT IA+NAG DS+EL++QL+A H + AG+++ G + + ELG+ ESFKVKQ VL+S +A Sbjct: 387 RSIHDALCVLAVTVAETRTVLGAGCSEMIMSKAVDELAAITPGKKAMAIESFAKALRQIPTIIANNAGYDSSELVSQLKAAHHQGDKKAGLNMRDGCIGNAEELGVIESFKVKQQVLVSAHEA 509
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27 Identity = 63/123 (51.22%), Postives = 90/123 (73.17%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDA 469 R LHDAL VLSQT ++R + GGG EMVM+K VD A+ GKKS A+EAF+RAL +PT +ADNAG DS+EL+++LR+ +G+D+ +G++ DM +LGI ES+K+K+AV+ S ++A Sbjct: 382 RSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEA 504
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: TCPB_SCHPO (Probable T-complex protein 1 subunit beta OS=Schizosaccharomyces pombe GN=cct2 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.479e-27 Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDACR 475 R +HDAL VLSQTV +SRV GGG EM+MAK V+E A PGKK+ A+ AF++AL +PT +ADNAG DS+EL+AQL+A H G+D+ G + DM GI E+ K+KQAV+ S ++ + Sbjct: 384 RAIHDALAVLSQTVAESRVTLGGGCAEMLMAKAVEEAATHEPGKKAVAVSAFAKALSQLPTILADNAGFDSSELVAQLKAAHYDGNDTMGLDMDEGEIADMRAKGILEALKLKQAVVSSGSEGAQ 508
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 5.817e-24 Identity = 58/123 (47.15%), Postives = 80/123 (65.04%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDA 469 R LHDALCVL V +S+ + G G E++M+ + A+K GK++ A+EAF RAL +PT I DNAGLDSAEL+ +LRAEH GID+ G V D+ +LG+ ES+ VK ++ S +A Sbjct: 382 RSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEA 504
BLAST of EY702856 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.609e-21 Identity = 51/123 (41.46%), Postives = 80/123 (65.04%), Query Frame = 2 Query: 101 RPLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE*CPAGIDVISGSVRDMAELGISESFKVKQAVLLSTTDA 469 R + DA+ V++ + D +V+ GGG PE+ +A+++ + A G++ A+EAF+ AL IP T+A+N+GLD +++ QLRA+H+ AGIDV G V+DM E G+ E +VK L S T+A Sbjct: 391 RAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLRDFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQVTAGIDVYDGDVKDMLEEGVVEPLRVKTQALASATEA 513 The following BLAST results are available for this feature:
BLAST of EY702856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702856 ID=EY702856; Name=EY702856; organism=Citrus sinensis; type=EST; length=893bpback to top |