EY702850

Overview
NameEY702850
Unique NameEY702850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702850 vs. ExPASy Swiss-Prot
Match: NPS13_ARATH (Novel plant SNARE 13 OS=Arabidopsis thaliana GN=NPSN13 PE=1 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 4.718e-97
Identity = 180/211 (85.31%), Postives = 198/211 (93.84%), Query Frame = 2
Query:   77 MATDLQMSPQLEQIHGEIRDNFRALSNGFQKLDKIKDSNRQTKQLEELTGRMRECKRLIKEMDREIKDEEARNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNSLGNKKVELFDMGAGVS-EPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQMVVEQTIEVGTQTATTLKGQTDQMGRIVNELDTIQFSIKKGSQLVKEIGRR 706
            MA++L MSPQLEQIHGEIRD+FRAL+NGFQ+LDKIKDS RQ+KQLEELT +MRECKRL+KE DRE+KDEEARN PEVNKQLNDEKQSMIKELNSYVALRKTYM++LGNKKVELFDMGAGVS EPTA+ENVQVASSMSNQEL+DAG K MDETDQAI+RS+ VVEQT+EVGTQTA  LKGQTDQMGR+VN LDTIQFSIKK SQLVKEIGR+
Sbjct:    1 MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVKEFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQTDQMGRVVNHLDTIQFSIKKASQLVKEIGRQ 211          

HSP 2 Score: 22.7126 bits (47), Expect = 4.718e-97
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  700 KKVATDKCIMLF 735
            ++VATDKCIM F
Sbjct:  210 RQVATDKCIMGF 221          
BLAST of EY702850 vs. ExPASy Swiss-Prot
Match: NPS12_ARATH (Novel plant SNARE 12 OS=Arabidopsis thaliana GN=NPSN12 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 3.051e-93
Identity = 170/211 (80.57%), Postives = 196/211 (92.89%), Query Frame = 2
Query:   77 MATDLQMSPQLEQIHGEIRDNFRALSNGFQKLDKIKDSNRQTKQLEELTGRMRECKRLIKEMDREIKDEEARNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNSLGNKKVELFDMGAGVS-EPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQMVVEQTIEVGTQTATTLKGQTDQMGRIVNELDTIQFSIKKGSQLVKEIGRR 706
            MA++L MSP LEQIHGEIRD+FRAL+NGFQ+LDKIKDS+RQ+KQLEEL  +MR+CKRL+KE DRE+KD EARN P+VNKQLNDEKQSMIKELNSYVALRKTY+N+LGNKKVELFD GAGVS EPTA+ENVQ+AS+MSNQEL+DAG K MDETDQAI+RS+ VV QT+EVGTQTA+ LKGQTDQMGR+VN+LDTIQFS+KK SQLVKEIGR+
Sbjct:    1 MASELPMSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVKEFDRELKDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTLGNKKVELFDTGAGVSGEPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQTDQMGRVVNDLDTIQFSLKKASQLVKEIGRQ 211          

HSP 2 Score: 23.8682 bits (50), Expect = 3.051e-93
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  700 KKVATDKCIMLF 735
            ++VATDKCIM F
Sbjct:  210 RQVATDKCIMAF 221          
BLAST of EY702850 vs. ExPASy Swiss-Prot
Match: NPS11_ARATH (Novel plant SNARE 11 OS=Arabidopsis thaliana GN=NPSN11 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 3.622e-64
Identity = 124/206 (60.19%), Postives = 161/206 (78.16%), Query Frame = 2
Query:   95 MSPQLEQIHGEIRDNFRALSNGFQKLDKIKDSNRQTKQLEELTGRMRECKRLIKEMDREIKDEEARNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNSL--GNKKVELFDMGAGVSEPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQMVVEQTIEVGTQTATTLKGQTDQMGRIVNELDTIQFSIKKGSQLVKEIGRR 706
            +S +L +I G+I D FRALSNGFQKL+KIKD+NRQ++QLEELT +MR+CK LIK+ DREIK  E+ N    N+ LND +QSM+KELNSYVAL+K Y ++L   NK+V+LFD   G  E   +ENV +AS+MSNQEL+D G   MD+TDQAI+R + +V++TI VGT T+  LK QT+QM R+VNELD+I FS+KK S+LVKEIGR+
Sbjct:    7 VSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKDFDREIKSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFD---GPGEEHMEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKPQTEQMSRVVNELDSIHFSLKKASKLVKEIGRQ 209          

HSP 2 Score: 23.8682 bits (50), Expect = 3.622e-64
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  700 KKVATDKCIMLF 735
            ++VATDKCIM F
Sbjct:  208 RQVATDKCIMAF 219          
The following BLAST results are available for this feature:
BLAST of EY702850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
NPS13_ARATH4.718e-9785.31Novel plant SNARE 13 OS=Arabidopsis thaliana GN=NP... [more]
NPS12_ARATH3.051e-9380.57Novel plant SNARE 12 OS=Arabidopsis thaliana GN=NP... [more]
NPS11_ARATH3.622e-6460.19Novel plant SNARE 11 OS=Arabidopsis thaliana GN=NP... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-A04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702850 ID=EY702850; Name=EY702850; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGAGCAATTTGAATGCCGTGGTGATAATTTAGTTGCCGGAG
ATTTTGATTGATTTTCCGGCGTAATTATGGCGACCGATTTGCAGATGAGC
CCTCAGTTGGAGCAGATCCACGGCGAAATTCGCGATAATTTTCGAGCTCT
CTCAAATGGCTTCCAGAAGCTGGATAAGATCAAAGATTCCAACCGACAAA
CTAAGCAGCTGGAAGAACTCACTGGGAGGATGAGGGAGTGTAAAAGATTA
ATTAAAGAGATGGATCGTGAAATTAAAGATGAAGAAGCCCGAAATCCTCC
GGAAGTCAATAAGCAACTCAATGACGAGAAGCAATCTATGATAAAAGAGT
TGAACTCTTATGTTGCATTGAGGAAAACGTATATGAACAGCCTTGGTAAT
AAGAAGGTTGAACTCTTTGATATGGGAGCGGGAGTCAGTGAACCTACAGC
TGATGAAAATGTTCAAGTGGCATCATCCATGTCAAATCAAGAACTAATTG
ATGCTGGGAAGAAGACAATGGATGAGACTGATCAGGCTATTAAACGTTCT
CAAATGGTTGTTGAACAAACAATTGAAGTGGGAACCCAAACTGCCACCAC
ATTAAAGGGTCAAACTGATCAAATGGGCCGTATTGTTAATGAGCTAGATA
CNATTCAGTTCTCAATTAAGAAAGGCTCCCAGCTCGTGAAGGAGATTGGA
AGAAGGTGGCTACAGATAAATGCATAATGCTATTCCCCTATTCTATCGTC
TGTGGTGTAATAGGCATCATTGTAGTGAAAGGGTGTCACCCAACAACAAG
ACATCAGGGACATCCCANGATGGNCNNACTCAGCTCCGGCAGGGAGCTGT
TATCTCTGCAGCACCAGAACATTCTGAGAAGATCATCATTTCTTGCTGGG
AAGGATCATC
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