EY649770

Overview
NameEY649770
Unique NameEY649770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig444 contig Csv1_Contig444:363..780. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_LACSA (Plastocyanin OS=Lactuca sativa GN=PETE PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.253e-34
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K VFKNNAGFPHNVVFDEDEIP+GVD SKISMS EDLLN PGETYAVTLTEKGTYSFYC+PHQGAGMVG+VTVN
Sbjct:   26 KIVFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAPGETYAVTLTEKGTYSFYCAPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 5.293e-33
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1
Query:    7 VFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            VFKNNAGFPHNVVFDEDEIPSGVD +KISMS EDLLN PGETY VTLTEKGTY FYCSPHQGAGMVG+VTVN
Sbjct:   97 VFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS2_TOBAC (Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.293e-33
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHNVVFDEDEIP+GVD SKISMS EDLLNGPGETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct:   26 KITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_RUMOB (Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.913e-33
Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            K VFKNNAGFPHN+VFDEDE+P+GVD SKISMS EDLLN PGETYAVTL+EKGTYSFYCSPHQGAGMVG+VTV
Sbjct:   26 KIVFKNNAGFPHNIVFDEDEVPAGVDASKISMSEEDLLNAPGETYAVTLSEKGTYSFYCSPHQGAGMVGKVTV 98          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_MERPE (Plastocyanin OS=Mercurialis perennis GN=PETE PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.540e-32
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHNVVFDEDEIPSGVD SKISM   DLLN PGETYAVTLTEKG+YSFYCSPHQGAGMVG+VTVN
Sbjct:   26 KITFKNNAGFPHNVVFDEDEIPSGVDASKISMDEADLLNAPGETYAVTLTEKGSYSFYCSPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_SOLCR (Plastocyanin OS=Solanum crispum GN=PETE PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.011e-32
Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHNVVFDEDEIP+GVD SKISM  EDLLN PGETY+VTL+EKGTYSFYCSPHQGAGMVG+VTVN
Sbjct:   26 KITFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVTLSEKGTYSFYCSPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS1_TOBAC (Plastocyanin A'/A'' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.011e-32
Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHNVVFDEDEIP+GVDVSKISMS E+ LNGPGETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct:   26 KITFKNNAGFPHNVVFDEDEIPAGVDVSKISMSEEEYLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_SAMNI (Plastocyanin OS=Sambucus nigra GN=PETE PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 9.983e-32
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHNVVFDEDE+PSGVD +KISMS +DLLN PGETY+VTLTE GTY FYCSPHQGAGMVG+VTVN
Sbjct:   26 KITFKNNAGFPHNVVFDEDEVPSGVDSAKISMSEDDLLNAPGETYSVTLTESGTYKFYCSPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_CUCPE (Plastocyanin OS=Cucurbita pepo GN=PETE PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.304e-31
Identity = 63/74 (85.14%), Postives = 66/74 (89.19%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K VFKNNAGFPHNVVFDEDEIPSGVD  KISM+ EDLLN PGE Y V LTEKG+YSFYCSPHQGAGMVG+VTVN
Sbjct:   26 KIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMNEEDLLNAPGEVYKVNLTEKGSYSFYCSPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.224e-31
Identity = 62/74 (83.78%), Postives = 68/74 (91.89%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHNVVFDEDEIP+GVD SKISMS EDLLN  GETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct:   97 KITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170          
The following BLAST results are available for this feature:
BLAST of EY649770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PLAS_LACSA6.253e-3490.54Plastocyanin OS=Lactuca sativa GN=PETE PE=1 SV=1[more]
PLAS_SPIOL5.293e-3390.28Plastocyanin, chloroplastic OS=Spinacia oleracea G... [more]
PLAS2_TOBAC5.293e-3386.49Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1[more]
PLAS_RUMOB6.913e-3387.67Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV... [more]
PLAS_MERPE1.540e-3287.84Plastocyanin OS=Mercurialis perennis GN=PETE PE=1 ... [more]
PLAS_SOLCR2.011e-3286.49Plastocyanin OS=Solanum crispum GN=PETE PE=1 SV=1[more]
PLAS1_TOBAC2.011e-3285.14Plastocyanin A'/A'' OS=Nicotiana tabacum PE=1 SV=1[more]
PLAS_SAMNI9.983e-3283.78Plastocyanin OS=Sambucus nigra GN=PETE PE=1 SV=1[more]
PLAS_CUCPE1.304e-3185.14Plastocyanin OS=Cucurbita pepo GN=PETE PE=1 SV=1[more]
PLAS_SOLLC2.224e-3183.78Plastocyanin, chloroplastic OS=Solanum lycopersicu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649770 ID=EY649770; Name=EY649770; organism=Citrus sinensis; type=EST; length=418bp
AAAGATGTGTTCAAGAACAATGCTGGGTTCCCACACAACGTTGTTTTCGA
TGAAGATGAGATTCCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTA
CAGAAGACCTTCTCAATGGTCCTGGAGAGACTTATGCTGTTACTCTGACT
GAAAAAGGCACTTACTCTTTCTACTGTTCCCCTCACCAAGGAGCTGGCAT
GGTTGGACAAGTGACTGTTAATTAAGTTCACATTCAGACTTTGTTTGCCT
CATCTCATTGGTTATCGTTCTCTTCTTTTTGCATTTTATGAGTATCATAC
ATATTTTCATTTGGTGAGAGAGAATGTTATGTGGTGAGACACTTCAACCA
AGCCAATAAACCTCTGTATTTTCCATTTATTTCAAATGCAGATTTGTGAT
GTAAAAAAAAAAAAAAAA
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