EY702825

Overview
NameEY702825
Unique NameEY702825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702825 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.959e-28
Identity = 83/230 (36.09%), Postives = 117/230 (50.87%), Query Frame = 3
Query:   84 LDPKTNVDSKDVVYSPENNLS----ARLYLPKNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFE-QVFYSGDSAGANIAHHMAIRNGGEIIDGFNVVGIVLIHPYFWGVEPVGSEPT-DVKIRA---GTERFWRFTCPSTSGLDDPWVNPCAD-GSSLASLGCAQVLVFAA 743
            +D  TN+ ++  +Y P + L       L L K  +  + +P+L++FHGG F   +A S  Y  +   LV+   ++ VSVDYRR+PEH  P AY+D W+A+ WV S V       WL    D    V+ +GDS+G NIAH++A+R   E   G  V+G +L+HP F G E   SE T D K        + +WR   P     D P  NP    G SL  +   + LV  A
Sbjct:   69 VDSTTNLLTR--IYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV-------WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNE---GVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVA 286          
BLAST of EY702825 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.095e-25
Identity = 81/245 (33.06%), Postives = 119/245 (48.57%), Query Frame = 3
Query:   72 VPPSLDPKTNVDSKDVVYSPENNLSARLYLPKNTNQNQK--------------LPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFE-QVFYSGDSAGANIAHHMAIRNGGEIIDGFNVVGIVLIHPYFWGVEPVGSEPT-----DVKIRAGTERFWRFTCPSTSGLDDPWVNPCAD-GSSLASLGCAQVLVFAA 743
            V  + +P   V S DV+     NL +R+Y P   +Q Q               +P++++FHGG F   +A S  Y      LV     + VSV+YRRAPE+P P AY+D W A+ WV S         WL    D +  +F +GDS+G NIAH++A+R G     G +V+G +L++P F G E   SE +      V +R   + +W+   P     + P  NP +  G SL  +   + LV  A
Sbjct:   53 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS-------RSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVR-DRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVA 286          
BLAST of EY702825 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.162e-25
Identity = 81/243 (33.33%), Postives = 117/243 (48.15%), Query Frame = 3
Query:   72 VPPSLDPKTNVDSKDVVYSPENNLSARLYLP------------KNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFE-QVFYSGDSAGANIAHHMAIRNGGEIIDGFNVVGIVLIHPYFWGVEPVGSEPT-----DVKIRAGTERFWRFTCPSTSGLDDPWVNPCADGS-SLASLGCAQVLVFAA 743
            VP + +P   V S DV+   + NL +R+Y P            +N    + +P++V+FHGG F   +A S  Y      LV     + VSV+YRRAPE+  P AY+D W  +KWV S         WL    D + ++F +GDS+G NI H++A+R     ID   V+G +L++P F G E   SE        V +R   + +WR   P     + P  +P    S SL  L   + LV  A
Sbjct:   53 VPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS-------SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRID---VLGNILLNPMFGGTERTESEKRLDGKYFVTVR-DRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVA 284          
BLAST of EY702825 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.644e-23
Identity = 82/266 (30.83%), Postives = 118/266 (44.36%), Query Frame = 3
Query:   36 DGKVERLRGTDI---VPPSLDPKTNVDSKDVVYSPENNLSARLYLPKNTNQNQK---------------------LPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFE-QVFYSGDSAGANIAHHMAIRNGGEIIDGFNVVGIVLIHPYFWGVEPVGSE-PTDVK---IRAGTERFWRFTCPSTSGLDDPWVNPCA-DGSSLASLGCAQVLVFAA 743
            DG  ER  G  +   VP +  P   V S D +      L  R+Y        ++                      P++++FHGG F   +A S  Y +     V  +  + VSV+YRRAPEH  P AY+D W A+KWV S       + ++    D + +VF SGDS+G NIAHH+A+R   E   G  V G +L++  F G E   SE   D K        + +W+   P  +  D P  NP   +G  L  L  A+ L+  +
Sbjct:   38 DGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE---GVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVS 293          
BLAST of EY702825 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.531e-14
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 3
Query:   90 PKTNVDSKDVVYSPENNLSARLYLPKNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNR-NADFEQVFYSGDSAGANIAHHMA 494
            P T+ ++  V  +  NN+  R+Y+PK  ++  +  L  Y HGGG+C+ +A    Y           +++ VS +YR APE+  PI +ED +DA+KW          +D L +   D E+V  SGDSAG N+A  +A
Sbjct:   71 PPTSDENVTVTETTFNNVPVRVYVPKRKSKTLRRGLF-YIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLR-------QDVLEKYGVDPERVGVSGDSAGGNLAAAVA 198          
BLAST of EY702825 vs. ExPASy Swiss-Prot
Match: LIP2_MORS1 (Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.535e-11
Identity = 41/127 (32.28%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  111 KDVVYSPENNLSARLYLPKNTNQNQKLP---LLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFEQVFYSGDSAGANIA 482
            K +  +   +++ R Y     N  +K      +++FHGGGFCI      T+H + + + ++     VSVDYR APE+P P A +D   A  W+A H    G        A   ++  SGDSAG  +A
Sbjct:  129 KTIANADGGDMTVRCYQKSTQNSERKSTDEAAMLFFHGGGFCIGDI--DTHHEFCHTVCAQTGWAVVSVDYRMAPEYPAPTALKDCLAAYAWLAEHSQSLG--------ASPSRIVLSGDSAGGCLA 245          
BLAST of EY702825 vs. ExPASy Swiss-Prot
Match: AAAD_HUMAN (Arylacetamide deacetylase OS=Homo sapiens GN=AADAC PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 9.951e-11
Identity = 42/139 (30.22%), Postives = 67/139 (48.20%), Query Frame = 3
Query:   66 DIVPPSLDPKTNVDSKDVVYSPENNLSARLYLPKNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFEQVFYSGDSAGANIA 482
            D VPP+ D    V          NN+  R+Y+PK  ++  +  L  Y HGGG+C+ +A    Y           + + VS +YR AP++  PI +ED ++A++W          +       + E++  SGDSAG N+A
Sbjct:   69 DEVPPTSDENVTVTETKF-----NNILVRVYVPKRKSEALRRGLF-YIHGGGWCVGSAALSGYDLLSRWTADRLDAVVVSTNYRLAPKYHFPIQFEDVYNALRWFLR------KKVLAKYGVNPERIGISGDSAGGNLA 195          
The following BLAST results are available for this feature:
BLAST of EY702825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
GI1L2_ARATH8.959e-2836.09Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
GI1L1_ARATH1.095e-2533.06Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
GI1L3_ARATH4.162e-2533.33Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GID1_ORYSJ6.644e-2330.83Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
AAAD_RABIT2.531e-1434.56Arylacetamide deacetylase OS=Oryctolagus cuniculus... [more]
LIP2_MORS11.535e-1132.28Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 P... [more]
AAAD_HUMAN9.951e-1130.22Arylacetamide deacetylase OS=Homo sapiens GN=AADAC... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-F10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702825 ID=EY702825; Name=EY702825; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGCCCACGCGTCTGAAAGTACACAAAGACGGCAAAGTAGAA
AGGCTTAGGGGCACCGATATCGTTCCCCCATCACTTGATCCCAAAACAAA
CGTTGATTCCAAAGACGTTGTGTATTCTCCTGAAAATAATTTATCTGCTC
GGCTTTACCTCCCGAAAAACACAAATCAAAACCAAAAACTTCCCCTTCTT
GTTTATTTTCACGGCGGAGGTTTTTGCATCGAGACTGCTTTTTCACCAAC
TTACCATAATTACCTCAACGACTTGGTCTCTGAAGCTAACATCATCGCAG
TCTCGGTCGACTACCGAAGAGCCCCAGAGCATCCCCTTCCTATCGCTTAT
GAAGATTCATGGGACGCAGTCAAATGGGTTGCTTCCCATGTTGACGGAAG
TGGCCCCGAAGATTGGCTCAACCGTAATGCTGATTTTGAGCAAGTGTTTT
ACTCTGGGGACAGCGCTGGTGCTAATATTGCTCATCACATGGCAATAAGA
AACGGTGGAGAAATCATCGACGGCTTTAATGTTGTTGGTATTGTCTTGAT
TCATCCATACTTTTGGGGTGTTGAACCTGTTGGTTCCGAGCCTACTGATG
TTAAAATAAGAGCTGGAACGGAGAGATTTTGGCGATTTACTTGTCCAAGC
ACAAGCGGGCTCGATGATCCGTGGGTTAATCCGTGTGCTGACGGTTCGAG
CCTCGCGAGCCTGGGGTGCGCCCAGGTGCTGGTGTTTGCTGCGGAGAGGA
TTTCCTGGTGCCTAGAAGATGGTTTTACTATGAGAAGTTGAAAGAAGTGG
GTGGGGAGGCCTGTAGAAAATAGTGAATCTAAAGAGAACAACTGTGGTCC
CTGTATCCATCCCCCTTGGGAAATGCTGGGTCTATGCTCAAAAAATTTGT
CTTTCTCATCAG
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